FFCP PHASE1:Mm9::chr17:34987413..34987438,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:34987413..34987438,+ to FFCP PHASE1:Mm9::chr17:34987413..34987438,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27632 | |EntrezGene=27632 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G3UY39 | |UniProt=G3UY39 | ||
|association_with_transcript=60bp_to_ENSMUST00000173065_5end | |||
|cluster_id=chr17:34987413..34987438,+ | |||
|description=CAGE_peak_3_at_Rdbp_5end | |||
|id=chr17:34987413..34987438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.59e-14!130;UBERON:0000925!5.59e-14!130;UBERON:0006595!5.59e-14!130;UBERON:0001007!1.13e-13!128;UBERON:0001555!1.13e-13!128;UBERON:0007026!1.13e-13!128;UBERON:0004921!7.27e-13!126;UBERON:0004185!7.27e-13!126;UBERON:0005409!4.63e-09!59;UBERON:0003929!7.31e-09!55;UBERON:0000160!7.37e-09!43;UBERON:0005057!5.27e-08!51;UBERON:0004177!3.44e-07!29;UBERON:0000072!3.58e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.03e-12,118;UBERON:0000925,1.03e-12,118;UBERON:0006595,1.03e-12,118;UBERON:0001007,1.99e-12,116;UBERON:0001555,1.99e-12,116;UBERON:0007026,1.99e-12,116;UBERON:0004921,1.20e-11,114;UBERON:0003929,3.57e-09,55;UBERON:0000160,4.53e-09,31;UBERON:0005409,5.66e-09,47;UBERON:0004177,1.35e-07,29;UBERON:0005057,1.35e-07,29;UBERON:0000072,1.39e-07,27;UBERON:0000949,4.61e-07,72;UBERON:0002370,4.74e-07,23;UBERON:0000974,4.74e-07,23;UBERON:0004807,4.74e-07,23;UBERON:0005058,4.74e-07,23;UBERON:0003351,4.74e-07,23;UBERON:0009113,4.74e-07,23;UBERON:0003295,4.74e-07,23;UBERON:0009722,4.74e-07,23;UBERON:0005562,4.74e-07,23;UBERON:0007690,4.74e-07,23 | |||
|phase1_expression=1.12104192973356,2.79180326111489,4.09499315450582,1.81478526784098,2.50447864973174,4.8684988854448,5.37309073369709,1.29123323441576,5.06839399746,5.61754863172784,5.82141091966717,5.50427897067821,1.54080656938085,1.74840804837995,4.99664642723494,6.47920855647443,6.29605690315332,2.05050407482854,1.64537320326887,2.97072756258621,3.40173160604279,10.9220046320974,10.4479915655574,4.95976510659561,5.50582274561208,6.31655160526522,4.30761996159075,3.44753972297422,4.94060890586572,4.78857246543868,7.98229838359097,24.131165591466,30.1381745916439,0,5.77703239502549,8.6442015586416,8.16677425049476,2.09265815368454,0,3.14114246384279,0.588231488031014,0.683045484958446,2.42755176515577,0.755380907853464,1.11514624341466,0.917733760808408,0,3.48840250208714,2.19686182734472,2.52758868796568,3.63964696225943,2.87505128729943,2.01339127269284,2.90144856804538,3.6970317905671,1.28629718017973,0.573066879877513,0.515672092277442,0.606949382578793,1.5869729378161,0,2.71075625655306,3.55717918444456,0.449949858640699,0.988866362566974,0,0,1.53687322128622,1.24427534770173,1.35005938331691,0.420649922702764,0.856952953211411,1.54607978666129,0.857435594504678,1.82106394934649,0.919218786610021,0,0.127687338085188,0.307213066512487,1.18697658957174,0.640413505216868,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,1.17851434189467,1.99320353118744,0.745597783301202,0.454357159999104,0.831287161174641,2.6087803983151,1.72084775396277,0.679971333707751,3.2382191498269,0.649776417447669,1.34408066129201,2.24711072210803,1.02258193546835,2.33807404142582,2.82671659608272,0.985903938436763,2.56652954828636,0,0,6.71122227134764,4.56047757855178,6.57181778519218,2.05530983494308,0.517875767294343,1.03909497345377,2.77576522825817,2.13125834818499,1.38369298353635,1.05505848386836,1.29347577849275,1.0053327306374,3.21353458054686,0.289198713839823,1.76922110389975,1.45590164952668,1.54589062922275,1.45462575940567,3.72783522436244,0.292780797011547,0.209446706813455,3.83185582812887,3.23500836165985,4.19931911695385,2.92261522268049,0.149790639404823,0,1.25654352112864,0,0,0.41557608911912,0.486723789203273,2.74966282395854,1.99051152976149,16.9324248150562,2.73574412652416,3.3831315170303,1.60931473103431,1.0803727788321,1.50704817835715,1.02054748726992,0.896796041993948,1.12442069471675,1.03481348295606,4.52692785158969,2.83659120251729,3.51902248327898,3.5071317188412,3.33656699070717,2.089512999133,1.02891068203972,2.38841120182192,1.40442637462647,2.57347907114715,2.27330799516474,0.828503090142008,1.87620847984877,0.720248245844059,1.65721314909647,0.196764231747404,0.925602677324269,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.411618449517138,2.31293148088659,6.08236303326152,4.90562976231038,3.94802342162745,3.35055399437443,6.45387278794696,5.78182913996663,4.56541502670142,2.84717436926707,3.29397909448022,4.52403375840485,3.97912944082302,4.48417400373976,3.59527763461689,2.59365659849633,3.38540164532424,5.31070122668629,2.74196430263349,3.38123207019241,2.24016460629846,2.52138233317913,2.38461787627083,2.52946148497029,1.32849133181642,1.255989822731,1.1105744752962,2.37162101669719,5.33904338291501,4.52085688760367,4.27238013531222,5.88294352026658,5.54707467430559,4.07401362850272,1.43848068725405,5.18832725680113,5.49122826376163,1.43768206527355,2.60498663367952,3.74445207737473,1.76805214562978,5.56131981917928,1.92977408545347,0.739012760666419,4.9267767060326,3.42226450528254,3.05541154395339,2.81628297946203,0.837531287209079,1.19021820443007,0.975668239288994,0.945810864637146,0.8858587585951,0.159454768657487,0.491589944147214,1.55416483679306,1.3018415272336,1.50791283939272,1.08781136763742,4.42587845717133,2.48343071674259,0.160550589987792,0.117211686592203,4.75411341592359,0,0.315508219416257,0.390438744296638,0.861693590931196,0.716906393857656,0.445597348164788,0.566153061577665,0,0.876767573733936,0.790575555893047,0.321321316421807,0.851640511249612,2.84904965867608,3.4206261464251,1.48473110675282,0,6.06951590387454,6.34879469625977,3.96070667487386,5.61073596473468,4.30409207121498,2.58428293168221,2.54473610634254,4.27796854061666,1.58018378967908,2.10837217149998,0,1.02131881726136,3.6012218806262,4.65691261617916,2.7863814554107,2.12808280370728,2.14042581122485,2.46823530903181,3.65357938937519,7.04015124191131,1.48282449604674,0.220528398054962,1.97863503529776,2.9063596805263,2.95533332147964,4.65552141612232,3.44695889464629,3.49777003955821,0.370850604021019,1.87957968877638,2.47664241555867,3.1483069652851,5.27431679613135,3.8274383761887,3.43167259809784,3.90950388985867,3.77868921273877,3.31679937130617,0,4.4287039101359,3.86306987541013,3.34816556547584,3.76358932826044,2.62035076495413,1.21377911746339,1.48776220305605,1.57053565190418,3.24037433229482,0.621339313086926,12.4012446510522,2.99033092087958,3.14371131868485,2.72231663681667,2.97067593998782,1.52060512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| |phase1_expression=1.12104192973356,2.79180326111489,4.09499315450582,1.81478526784098,2.50447864973174,4.8684988854448,5.37309073369709,1.29123323441576,5.06839399746,5.61754863172784,5.82141091966717,5.50427897067821,1.54080656938085,1.74840804837995,4.99664642723494,6.47920855647443,6.29605690315332,2.05050407482854,1.64537320326887,2.97072756258621,3.40173160604279,10.9220046320974,10.4479915655574,4.95976510659561,5.50582274561208,6.31655160526522,4.30761996159075,3.44753972297422,4.94060890586572,4.78857246543868,7.98229838359097,24.131165591466,30.1381745916439,0,5.77703239502549,8.6442015586416,8.16677425049476,2.09265815368454,0,3.14114246384279,0.588231488031014,0.683045484958446,2.42755176515577,0.755380907853464,1.11514624341466,0.917733760808408,0,3.48840250208714,2.19686182734472,2.52758868796568,3.63964696225943,2.87505128729943,2.01339127269284,2.90144856804538,3.6970317905671,1.28629718017973,0.573066879877513,0.515672092277442,0.606949382578793,1.5869729378161,0,2.71075625655306,3.55717918444456,0.449949858640699,0.988866362566974,0,0,1.53687322128622,1.24427534770173,1.35005938331691,0.420649922702764,0.856952953211411,1.54607978666129,0.857435594504678,1.82106394934649,0.919218786610021,0,0.127687338085188,0.307213066512487,1.18697658957174,0.640413505216868,1.56274011167028,0.837548997004143,0.56276261003168,0.45839474333043,1.17851434189467,1.99320353118744,0.745597783301202,0.454357159999104,0.831287161174641,2.6087803983151,1.72084775396277,0.679971333707751,3.2382191498269,0.649776417447669,1.34408066129201,2.24711072210803,1.02258193546835,2.33807404142582,2.82671659608272,0.985903938436763,2.56652954828636,0,0,6.71122227134764,4.56047757855178,6.57181778519218,2.05530983494308,0.517875767294343,1.03909497345377,2.77576522825817,2.13125834818499,1.38369298353635,1.05505848386836,1.29347577849275,1.0053327306374,3.21353458054686,0.289198713839823,1.76922110389975,1.45590164952668,1.54589062922275,1.45462575940567,3.72783522436244,0.292780797011547,0.209446706813455,3.83185582812887,3.23500836165985,4.19931911695385,2.92261522268049,0.149790639404823,0,1.25654352112864,0,0,0.41557608911912,0.486723789203273,2.74966282395854,1.99051152976149,16.9324248150562,2.73574412652416,3.3831315170303,1.60931473103431,1.0803727788321,1.50704817835715,1.02054748726992,0.896796041993948,1.12442069471675,1.03481348295606,4.52692785158969,2.83659120251729,3.51902248327898,3.5071317188412,3.33656699070717,2.089512999133,1.02891068203972,2.38841120182192,1.40442637462647,2.57347907114715,2.27330799516474,0.828503090142008,1.87620847984877,0.720248245844059,1.65721314909647,0.196764231747404,0.925602677324269,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.411618449517138,2.31293148088659,6.08236303326152,4.90562976231038,3.94802342162745,3.35055399437443,6.45387278794696,5.78182913996663,4.56541502670142,2.84717436926707,3.29397909448022,4.52403375840485,3.97912944082302,4.48417400373976,3.59527763461689,2.59365659849633,3.38540164532424,5.31070122668629,2.74196430263349,3.38123207019241,2.24016460629846,2.52138233317913,2.38461787627083,2.52946148497029,1.32849133181642,1.255989822731,1.1105744752962,2.37162101669719,5.33904338291501,4.52085688760367,4.27238013531222,5.88294352026658,5.54707467430559,4.07401362850272,1.43848068725405,5.18832725680113,5.49122826376163,1.43768206527355,2.60498663367952,3.74445207737473,1.76805214562978,5.56131981917928,1.92977408545347,0.739012760666419,4.9267767060326,3.42226450528254,3.05541154395339,2.81628297946203,0.837531287209079,1.19021820443007,0.975668239288994,0.945810864637146,0.8858587585951,0.159454768657487,0.491589944147214,1.55416483679306,1.3018415272336,1.50791283939272,1.08781136763742,4.42587845717133,2.48343071674259,0.160550589987792,0.117211686592203,4.75411341592359,0,0.315508219416257,0.390438744296638,0.861693590931196,0.716906393857656,0.445597348164788,0.566153061577665,0,0.876767573733936,0.790575555893047,0.321321316421807,0.851640511249612,2.84904965867608,3.4206261464251,1.48473110675282,0,6.06951590387454,6.34879469625977,3.96070667487386,5.61073596473468,4.30409207121498,2.58428293168221,2.54473610634254,4.27796854061666,1.58018378967908,2.10837217149998,0,1.02131881726136,3.6012218806262,4.65691261617916,2.7863814554107,2.12808280370728,2.14042581122485,2.46823530903181,3.65357938937519,7.04015124191131,1.48282449604674,0.220528398054962,1.97863503529776,2.9063596805263,2.95533332147964,4.65552141612232,3.44695889464629,3.49777003955821,0.370850604021019,1.87957968877638,2.47664241555867,3.1483069652851,5.27431679613135,3.8274383761887,3.43167259809784,3.90950388985867,3.77868921273877,3.31679937130617,0,4.4287039101359,3.86306987541013,3.34816556547584,3.76358932826044,2.62035076495413,1.21377911746339,1.48776220305605,1.57053565190418,3.24037433229482,0.621339313086926,12.4012446510522,2.99033092087958,3.14371131868485,2.72231663681667,2.97067593998782,1.52060512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| ||
|short_description=p3@Rdbp | |||
}} | }} |
Latest revision as of 08:50, 26 September 2015
Short description: | p3@Rdbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rdbp_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENSMUST00000173065_5end |
EntrezGene: | Rdbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.03e-12 | 118 |
endoderm | 1.03e-12 | 118 |
presumptive endoderm | 1.03e-12 | 118 |
digestive system | 1.99e-12 | 116 |
digestive tract | 1.99e-12 | 116 |
primitive gut | 1.99e-12 | 116 |
subdivision of digestive tract | 1.20e-11 | 114 |
gut epithelium | 3.57e-09 | 55 |
intestine | 4.53e-09 | 31 |
gastrointestinal system | 5.66e-09 | 47 |
hemopoietic organ | 1.35e-07 | 29 |
immune organ | 1.35e-07 | 29 |
segment of respiratory tract | 1.39e-07 | 27 |
endocrine system | 4.61e-07 | 72 |
thymus | 4.74e-07 | 23 |
neck | 4.74e-07 | 23 |
respiratory system epithelium | 4.74e-07 | 23 |
hemolymphoid system gland | 4.74e-07 | 23 |
pharyngeal epithelium | 4.74e-07 | 23 |
thymic region | 4.74e-07 | 23 |
pharyngeal gland | 4.74e-07 | 23 |
entire pharyngeal arch endoderm | 4.74e-07 | 23 |
thymus primordium | 4.74e-07 | 23 |
early pharyngeal endoderm | 4.74e-07 | 23 |