FFCP PHASE1:Mm9::chr18:39820862..39820868,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:39820862..39820868,- to FFCP PHASE1:Mm9::chr18:39820862..39820868,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=154 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:39820862..39820868,- | |||
|description=CAGE_peak_at_chr18:39820862..39820868,- | |||
|id=chr18:39820862..39820868,- | |||
|ontology_enrichment_celltype=CL:0000723!1.74e-08!91;CL:0000048!1.74e-08!91;CL:0000049!4.09e-08!19;CL:0000034!1.12e-07!97;CL:0000763!4.00e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.15e-16,16;CL:0000049,4.41e-15,19;CL:0000839,2.05e-12,13;CL:0000723,4.00e-10,91;CL:0000048,4.00e-10,91;CL:0000988,5.73e-10,32;CL:0002032,5.73e-10,32;CL:0000037,5.73e-10,32;CL:0000837,5.73e-10,32;CL:0002320,8.81e-10,46;CL:0000134,8.81e-10,46;CL:0000050,1.73e-09,9;CL:0000034,5.60e-09,97;CL:0000219,1.27e-08,54;CL:0000557,7.94e-08,7;CL:0002031,1.14e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.04e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.00e-12,16;UBERON:0002390,2.81e-10,45;UBERON:0003061,2.81e-10,45;UBERON:0001474,7.58e-10,22;UBERON:0004765,7.58e-10,22;UBERON:0001434,7.58e-10,22;UBERON:0002384,8.81e-10,46;UBERON:0002193,2.74e-09,48;UBERON:0002405,2.74e-09,48;UBERON:0002204,4.22e-08,32 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0.171217968225505,0,0.342401459862411,0,5.99597571268193,3.03712901084739,12.5921138063066,0,0,1.69755860719212,0,1.48936426801328,2.35079810225042,0.319984845586813,0.22940928106717,0,0,0,0.760093677825496,0,0.443461021310609,6.35030673459631,15.9916844771988,15.8481681015439,0.288851619751275,0.664938581433969,0,1.67412652294763,4.6880120671428,0,0,0.683045484958446,0,0,0.202753862439029,0,4.69434806608824,0.436050312760893,0.439372365468944,0,0,0,0.335565212115473,0,0,0,0.573066879877513,0,0.606949382578793,0,0,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,2.1314403448383,4.49400165777607,4.61061966385865,0.622137673850866,0.810035629990144,0.630974884054146,0.856952953211411,0.883474163806454,1.46988959057945,0.0958454710182364,0.919218786610021,4.40463523997555,0.766124028511126,0.307213066512487,0.527545150920775,0,0.52091337055676,0.837548997004143,1.12552522006336,0.61119299110724,3.24091444021034,0.854230084794618,0.745597783301202,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,2.15881276655127,0,0,0,0,0.519572009205738,1.7666978725517,0,0,0,0,1.94841936910093,2.53359865475099,1.51657333504435,0,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,1.32504911076236,0.484875253135222,0,0.292780797011547,0,0.766371165625774,0.958520996047362,2.99951365496704,0.508280908292259,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.497627882440372,0,0.210441855886474,0.780722657776222,2.06911893990126,0.900310649026746,0.30140963567143,0.136072998302656,0,0.374806898238915,0,0.215567992932842,0.378212160335639,0.703804496655795,1.09597866213787,0.278047249225598,0,0.205782136407943,0.59710280045548,1.40442637462647,2.57347907114715,1.13665399758237,0.414251545071004,0,0.36012412292203,0,0.787056926989615,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0.32833492815819,0,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0.528901133327089,0.426576501070468,0.696710015581316,0.515469845288373,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0,0.758671603812327,1.02823661348756,0,0,0.581857461502877,0.140271639780637,0,0,0,0,0.296452627087149,1.66845105716094,0.982794975566015,0.449724224769707,1.01430060694251,1.68824011826692,1.2731292589071,1.43848068725405,0.486405680325106,1.92192989231657,0,0.372140947668503,0,0,0,0,0.184753190166605,0.947457058852424,0.977789858652155,1.18821560042632,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0.491804836130026,0,2.2085575359138,0.780877488593277,1.29254038639679,0.477937595905104,1.11399337041197,0.849229592366497,1.21443210502468,1.46127928955656,1.18586333383957,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0.728341908464944,0.604647113929502,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.900305470156551,1.16422815404479,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,1.70870880797853,0.619160603889667,0.925972636848558,1.88368457004691,2.32380187125743,2.51655990527175,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0.406638934253697,0.216010681643603,1.04544148007234,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0.747582730219894,0.827292452285488,0.777804753376191,0.516639293910924,0.506868376472335,0.469428954583016,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.810900861160657,1.23253148597793,1.03936658382236,1.43221356533985,1.19208812868759,0.961563596159751,1.47689527174577,0.201932899896295,0.304827226619999,0.504130925684203,0.38983152295901,0.769694733122636,0,0,0.221985953374065,0.448569283047378,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,1.35004500046361,0,0.906284817968409,0,1.03787347584177,0.399024873401031,0.853668028770671,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.760437899670719,0.377252682772152,0.0936415074698824,0,0.17230640686684,0,0,0,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0,0.423073039458382,0.548783918618318,0,0.135804113845862,2.24456908663095,0.474540072496697,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0.171217968225505,0,0.342401459862411,0,5.99597571268193,3.03712901084739,12.5921138063066,0,0,1.69755860719212,0,1.48936426801328,2.35079810225042,0.319984845586813,0.22940928106717,0,0,0,0.760093677825496,0,0.443461021310609,6.35030673459631,15.9916844771988,15.8481681015439,0.288851619751275,0.664938581433969,0,1.67412652294763,4.6880120671428,0,0,0.683045484958446,0,0,0.202753862439029,0,4.69434806608824,0.436050312760893,0.439372365468944,0,0,0,0.335565212115473,0,0,0,0.573066879877513,0,0.606949382578793,0,0,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,2.1314403448383,4.49400165777607,4.61061966385865,0.622137673850866,0.810035629990144,0.630974884054146,0.856952953211411,0.883474163806454,1.46988959057945,0.0958454710182364,0.919218786610021,4.40463523997555,0.766124028511126,0.307213066512487,0.527545150920775,0,0.52091337055676,0.837548997004143,1.12552522006336,0.61119299110724,3.24091444021034,0.854230084794618,0.745597783301202,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,2.15881276655127,0,0,0,0,0.519572009205738,1.7666978725517,0,0,0,0,1.94841936910093,2.53359865475099,1.51657333504435,0,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,1.32504911076236,0.484875253135222,0,0.292780797011547,0,0.766371165625774,0.958520996047362,2.99951365496704,0.508280908292259,0,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.497627882440372,0,0.210441855886474,0.780722657776222,2.06911893990126,0.900310649026746,0.30140963567143,0.136072998302656,0,0.374806898238915,0,0.215567992932842,0.378212160335639,0.703804496655795,1.09597866213787,0.278047249225598,0,0.205782136407943,0.59710280045548,1.40442637462647,2.57347907114715,1.13665399758237,0.414251545071004,0,0.36012412292203,0,0.787056926989615,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0.32833492815819,0,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0.528901133327089,0.426576501070468,0.696710015581316,0.515469845288373,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0,0.758671603812327,1.02823661348756,0,0,0.581857461502877,0.140271639780637,0,0,0,0,0.296452627087149,1.66845105716094,0.982794975566015,0.449724224769707,1.01430060694251,1.68824011826692,1.2731292589071,1.43848068725405,0.486405680325106,1.92192989231657,0,0.372140947668503,0,0,0,0,0.184753190166605,0.947457058852424,0.977789858652155,1.18821560042632,0.469380496577004,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0.491804836130026,0,2.2085575359138,0.780877488593277,1.29254038639679,0.477937595905104,1.11399337041197,0.849229592366497,1.21443210502468,1.46127928955656,1.18586333383957,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0.728341908464944,0.604647113929502,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.900305470156551,1.16422815404479,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,1.70870880797853,0.619160603889667,0.925972636848558,1.88368457004691,2.32380187125743,2.51655990527175,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0.406638934253697,0.216010681643603,1.04544148007234,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0.747582730219894,0.827292452285488,0.777804753376191,0.516639293910924,0.506868376472335,0.469428954583016,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.810900861160657,1.23253148597793,1.03936658382236,1.43221356533985,1.19208812868759,0.961563596159751,1.47689527174577,0.201932899896295,0.304827226619999,0.504130925684203,0.38983152295901,0.769694733122636,0,0,0.221985953374065,0.448569283047378,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,1.35004500046361,0,0.906284817968409,0,1.03787347584177,0.399024873401031,0.853668028770671,0.486213434136588,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.760437899670719,0.377252682772152,0.0936415074698824,0,0.17230640686684,0,0,0,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.290692833264657,0,0.423073039458382,0.548783918618318,0,0.135804113845862,2.24456908663095,0.474540072496697,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr18:39820862..39820868,- | |||
}} | }} |
Latest revision as of 19:00, 5 August 2015
Short description: | p@chr18:39820862..39820868, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:39820862..39820868, - |
Coexpression cluster: | MCL_coexpression_mm9:154 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.15e-16 | 16 |
common myeloid progenitor | 4.41e-15 | 19 |
myeloid lineage restricted progenitor cell | 2.05e-12 | 13 |
somatic stem cell | 4.00e-10 | 91 |
multi fate stem cell | 4.00e-10 | 91 |
hematopoietic cell | 5.73e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.73e-10 | 32 |
hematopoietic stem cell | 5.73e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.73e-10 | 32 |
connective tissue cell | 8.81e-10 | 46 |
mesenchymal cell | 8.81e-10 | 46 |
megakaryocyte-erythroid progenitor cell | 1.73e-09 | 9 |
stem cell | 5.60e-09 | 97 |
motile cell | 1.27e-08 | 54 |
granulocyte monocyte progenitor cell | 7.94e-08 | 7 |
hematopoietic lineage restricted progenitor cell | 1.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.00e-12 | 16 |
hematopoietic system | 2.81e-10 | 45 |
blood island | 2.81e-10 | 45 |
bone element | 7.58e-10 | 22 |
skeletal element | 7.58e-10 | 22 |
skeletal system | 7.58e-10 | 22 |
connective tissue | 8.81e-10 | 46 |
hemolymphoid system | 2.74e-09 | 48 |
immune system | 2.74e-09 | 48 |
musculoskeletal system | 4.22e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.04e-07 | 6 |