FFCP PHASE1:Mm9::chr18:75857184..75857237,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:75857184..75857237,- to FFCP PHASE1:Mm9::chr18:75857184..75857237,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269037 | |EntrezGene=269037 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q1U6 | |UniProt=E9Q1U6 | ||
|association_with_transcript=0bp_to_ENSMUST00000065082_5end | |||
|cluster_id=chr18:75857184..75857237,- | |||
|description=CAGE_peak_2_at_Ctif_5end | |||
|id=chr18:75857184..75857237,- | |||
|ontology_enrichment_celltype=CL:0000117!1.88e-15!23;CL:0000337!1.88e-15!23;CL:0000221!1.43e-14!44;CL:0000133!1.43e-14!44;CL:0002319!2.45e-14!43;CL:0000540!7.56e-14!33;CL:0000047!7.56e-14!33;CL:0000031!7.56e-14!33;CL:0000404!7.56e-14!33;CL:0000055!1.38e-13!50;CL:0000393!4.49e-13!39;CL:0000211!4.49e-13!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-15,23;CL:0000337,1.34e-15,23;CL:0000221,1.05e-14,44;CL:0000133,1.05e-14,44;CL:0002319,1.80e-14,43;CL:0000540,5.63e-14,33;CL:0000047,5.63e-14,33;CL:0000031,5.63e-14,33;CL:0000404,5.63e-14,33;CL:0000393,3.41e-13,39;CL:0000211,3.41e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.28e-27!73;UBERON:0005743!4.28e-27!73;UBERON:0000073!5.34e-26!75;UBERON:0001016!5.34e-26!75;UBERON:0004121!6.60e-24!102;UBERON:0000924!6.60e-24!102;UBERON:0006601!6.60e-24!102;UBERON:0001049!8.67e-22!52;UBERON:0005068!8.67e-22!52;UBERON:0006241!8.67e-22!52;UBERON:0007135!8.67e-22!52;UBERON:0000955!3.75e-20!50;UBERON:0006238!3.75e-20!50;UBERON:0002616!9.07e-20!49;UBERON:0002020!3.81e-19!34;UBERON:0002346!6.51e-18!71;UBERON:0003075!6.51e-18!71;UBERON:0007284!6.51e-18!71;UBERON:0000033!8.82e-18!63;UBERON:0003080!4.55e-16!40;UBERON:0002791!9.70e-16!29;UBERON:0003528!9.70e-16!29;UBERON:0001893!9.70e-16!29;UBERON:0002780!1.20e-15!39;UBERON:0001890!1.20e-15!39;UBERON:0006240!1.20e-15!39;UBERON:0003056!2.71e-14!49;UBERON:0000956!2.78e-11!21;UBERON:0001869!2.78e-11!21;UBERON:0000203!2.78e-11!21;UBERON:0002619!6.01e-09!17;UBERON:0000468!1.74e-08!333;UBERON:0004111!1.42e-07!122;UBERON:0000025!1.70e-07!114;UBERON:0000153!7.28e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.32e-27,73;UBERON:0001016,2.97e-26,75;UBERON:0004121,4.17e-25,95;UBERON:0000924,4.17e-25,95;UBERON:0006601,4.17e-25,95;UBERON:0000073,1.74e-23,54;UBERON:0001049,5.33e-22,52;UBERON:0005068,5.33e-22,52;UBERON:0006241,5.33e-22,52;UBERON:0007135,5.33e-22,52;UBERON:0010371,5.38e-21,73;UBERON:0002346,1.41e-19,64;UBERON:0003075,1.41e-19,64;UBERON:0007284,1.41e-19,64;UBERON:0002020,2.50e-19,34;UBERON:0000955,1.77e-18,47;UBERON:0006238,1.77e-18,47;UBERON:0002616,4.24e-18,46;UBERON:0003080,3.21e-16,40;UBERON:0003528,6.90e-16,29;UBERON:0002791,6.90e-16,29;UBERON:0001893,6.90e-16,29;UBERON:0002780,8.55e-16,39;UBERON:0001890,8.55e-16,39;UBERON:0006240,8.55e-16,39;UBERON:0010314,9.94e-15,92;UBERON:0003056,2.00e-14,49;UBERON:0000956,2.20e-11,21;UBERON:0001869,2.20e-11,21;UBERON:0000203,2.20e-11,21;UBERON:0002619,5.03e-09,17;UBERON:0004111,2.53e-07,122;UBERON:0000025,2.71e-07,114 | |||
|phase1_expression=5.60520964866779,0.348975407639361,0.909998478779072,2.72217790176147,1.00179145989269,0.33575854382378,0.700837921786577,0.129123323441576,0.563154888606667,1.17032263160997,0,0,0,0,0.666219523631325,0,0,0,0,0,4.76242424845991,0,0,0.47997726838022,0.45881856213434,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.866554859253824,0,0.408338712524738,0,0,0,0,0,0.485510353031154,4.78407908307194,3.95370031756107,5.13930906052708,4.69434806608824,6.1047043786525,5.71184075109627,6.41618666945135,6.29938897314131,7.18762821824858,0,0,0,3.60163210450326,6.5902691185914,3.09403255366465,18.8154308599426,20.6306481916093,18.3811107016792,7.45457970552091,8.89294796111139,2.2497492932035,0,2.1314403448383,5.99200221036809,6.53171119046643,18.0419925416751,18.2258016747782,16.4053469854078,21.1381728458815,16.565140571371,17.2712026893085,21.4693855080849,18.3843757322004,14.3150645299205,16.2162919368188,15.0534402591119,22.1568963386726,28.4526571603494,25.5247551572812,11.1673199600552,9.00420176050688,9.77908785771585,21.2132581541041,17.2269733766915,29.6375118862228,2.27178579999552,2.56943304363071,6.95674772884027,3.44169550792555,3.39985666853875,0,1.29955283489534,1.79210754838934,0.702222100658759,5.62420064507591,5.71529210126311,2.82671659608272,6.05626705039726,5.13305909657271,10.1922095882658,0,0.865964164044856,1.77351905832569,2.02209778005913,2.16949371466214,1.03575153458869,4.45326417194474,5.03107447621794,2.13125834818499,3.92046345335299,2.41156224884196,5.17390311397101,2.38766523526383,2.96633961281249,5.35017620603673,0.884610551949874,6.63244084784378,3.97514733228708,2.42437626567611,1.86391761218122,6.73395833126558,11.1006754611131,0.510914110417183,0.11981512450592,0,0,8.53806644607489,6.8625090422794,27.0156857042658,12.1677024134594,14.0643501531682,11.6361304953354,12.9793010454206,4.88828946481518,4.47865094196335,1.51633655060205,1.89397670297827,4.94457683258274,2.06911893990126,4.86167750474443,4.82255417074288,5.23881043465224,3.84341160854549,5.05989312622536,3.62184719034622,2.58681591519411,5.67318240503458,4.57472922826267,3.06874025398605,5.56094498451196,6.268538997399,6.79081050146213,4.77682240364384,0,0,0,1.65700618028402,1.87620847984877,2.34080679899319,2.84093682702252,2.75469924446365,3.85667782218446,3.72054311600653,3.21928081679543,2.10177616260905,3.94943639792353,4.10418660197738,3.4859588104718,4.38599962275997,1.97595103761946,4.42881181909227,13.4585567081041,20.8896363129947,2.64335026387038,1.85115396664481,3.41261200856374,3.94802342162745,3.22168653305233,1.61346819698674,2.66853652613844,1.33157938278791,3.32170343081158,1.15289268306808,1.50801125280162,1.98956472041151,3.11942539390592,5.39291645192533,3.02593269824572,2.58883655230677,2.46568271239006,4.45569199177942,4.50830942692322,3.66572390121566,2.90928730751439,3.71719845418688,3.79419222745544,1.47610147979602,3.1399745568275,2.59134044235781,2.37162101669719,0.500535317148282,0.786235980452812,0.449724224769707,1.21716072833102,0,0,0.575392274901621,1.45921704097532,0.549122826376163,8.62609239164127,0.372140947668503,1.24815069245824,1.51547326768267,1.4351793081753,0.964887042726734,2.40179147216586,4.16881105895066,3.42226450528254,2.8856664581782,1.40814148973101,2.1775813467436,2.14239276797412,5.65887578787617,3.62560831444239,3.98636441367795,5.74037167166954,3.11340297959902,2.93564469172023,3.90552458170081,1.50791283939272,0,0.983528546038072,2.75936746304733,8.0275294993896,10.7834751664827,2.29508923527346,3.7870639080656,4.10160685241134,3.90438744296638,4.09304455692318,5.73525115086125,4.23317480756549,8.20921939287614,5.66734982344852,3.50707029493574,3.95287777946523,7.39039027770156,3.26462195979018,3.73937767701236,5.04949573996086,6.76377504187395,0,1.21390318077491,1.81394134178851,1.69744571780308,1.47650946440386,2.15204603560749,4.9101375701962,2.90826983582004,3.56497378384721,2.84433082142234,3.16255825724996,1.03135543248187,3.40439605753788,5.04171063287669,4.2688365648309,6.00143698088458,3.54680467284547,4.99432689285798,4.60737257685939,5.48036908406279,6.10146440965647,5.2958017715955,1.54369878638473,9.23363016472288,6.29711264114032,7.53911561601948,9.90790455226033,11.4898629821543,3.78925087618806,8.52956389248344,0.341741761595705,3.30218988741156,1.29636169158798,1.31857919903284,0.410082683163076,0.228778173206523,0,0.139951452323658,0.414599921413271,4.77335309007557,2.68885594543965,4.67634774391752,4.42821897369385,4.59994251231831,4.58561383866973,4.98998081623837,4.29797969771747,3.14107130380836,3.36998930558661,1.24267862617385,0,6.87776111802302,6.6183396182839,10.3059129822345,11.6243841129958,12.3337971608268,12.9092962510329,11.9788034056434,5.03324853243412,0.966336483304024,0.288030006257865,0,4.05450430580328,1.54066435747241,0.649604114888975,0.537080087002444,0.596044064343795,0.120195449519969,0.443068581523732,0.605798699688886,0.304827226619999,0.100826185136841,0.292373642219257,0.192423683280659,0.350630706544707,3.17422537061296,4.21773311410723,2.78112955489375,4.36500002546604,9.07991091951295,6.00583921443782,5.12824547948342,7.71726164684637,0.501572104035363,7.34177395402186,8.28585425712918,10.8850147553485,14.6075204992134,8.90607275701835,6.0431511791176,8.77529250301348,16.2115633160719,12.6879874515577,10.8729665467882,4.56664329370377,8.77854721482268,5.46347538413229,5.83456120963906,5.8691685535835,4.41224420280034,4.88942801163553,7.2112270033613,6.4183841918363,5.05394423527595,5.57654459758527,5.09291121742406,5.80577346313271,7.49094283136971,7.23686908840727,5.23923060411381,8.22778714208474,5.40145817298374,4.94503080963968,4.85756436443511,6.17164654293748,5.50174999093946,6.19934093863034,5.81385666529314,5.36423468367385,5.58456412085065,6.21955107767427,6.83981249738391,7.4692262615224,5.61142271657738,6.05038592433288,8.66839444904958,5.32000356120596,6.04253680625267,7.33045121728337,11.7410971630835,4.21076895201735,5.15690529715916,5.54736162999646,5.29419405886837,2.55054619182464 | |phase1_expression=5.60520964866779,0.348975407639361,0.909998478779072,2.72217790176147,1.00179145989269,0.33575854382378,0.700837921786577,0.129123323441576,0.563154888606667,1.17032263160997,0,0,0,0,0.666219523631325,0,0,0,0,0,4.76242424845991,0,0,0.47997726838022,0.45881856213434,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.866554859253824,0,0.408338712524738,0,0,0,0,0,0.485510353031154,4.78407908307194,3.95370031756107,5.13930906052708,4.69434806608824,6.1047043786525,5.71184075109627,6.41618666945135,6.29938897314131,7.18762821824858,0,0,0,3.60163210450326,6.5902691185914,3.09403255366465,18.8154308599426,20.6306481916093,18.3811107016792,7.45457970552091,8.89294796111139,2.2497492932035,0,2.1314403448383,5.99200221036809,6.53171119046643,18.0419925416751,18.2258016747782,16.4053469854078,21.1381728458815,16.565140571371,17.2712026893085,21.4693855080849,18.3843757322004,14.3150645299205,16.2162919368188,15.0534402591119,22.1568963386726,28.4526571603494,25.5247551572812,11.1673199600552,9.00420176050688,9.77908785771585,21.2132581541041,17.2269733766915,29.6375118862228,2.27178579999552,2.56943304363071,6.95674772884027,3.44169550792555,3.39985666853875,0,1.29955283489534,1.79210754838934,0.702222100658759,5.62420064507591,5.71529210126311,2.82671659608272,6.05626705039726,5.13305909657271,10.1922095882658,0,0.865964164044856,1.77351905832569,2.02209778005913,2.16949371466214,1.03575153458869,4.45326417194474,5.03107447621794,2.13125834818499,3.92046345335299,2.41156224884196,5.17390311397101,2.38766523526383,2.96633961281249,5.35017620603673,0.884610551949874,6.63244084784378,3.97514733228708,2.42437626567611,1.86391761218122,6.73395833126558,11.1006754611131,0.510914110417183,0.11981512450592,0,0,8.53806644607489,6.8625090422794,27.0156857042658,12.1677024134594,14.0643501531682,11.6361304953354,12.9793010454206,4.88828946481518,4.47865094196335,1.51633655060205,1.89397670297827,4.94457683258274,2.06911893990126,4.86167750474443,4.82255417074288,5.23881043465224,3.84341160854549,5.05989312622536,3.62184719034622,2.58681591519411,5.67318240503458,4.57472922826267,3.06874025398605,5.56094498451196,6.268538997399,6.79081050146213,4.77682240364384,0,0,0,1.65700618028402,1.87620847984877,2.34080679899319,2.84093682702252,2.75469924446365,3.85667782218446,3.72054311600653,3.21928081679543,2.10177616260905,3.94943639792353,4.10418660197738,3.4859588104718,4.38599962275997,1.97595103761946,4.42881181909227,13.4585567081041,20.8896363129947,2.64335026387038,1.85115396664481,3.41261200856374,3.94802342162745,3.22168653305233,1.61346819698674,2.66853652613844,1.33157938278791,3.32170343081158,1.15289268306808,1.50801125280162,1.98956472041151,3.11942539390592,5.39291645192533,3.02593269824572,2.58883655230677,2.46568271239006,4.45569199177942,4.50830942692322,3.66572390121566,2.90928730751439,3.71719845418688,3.79419222745544,1.47610147979602,3.1399745568275,2.59134044235781,2.37162101669719,0.500535317148282,0.786235980452812,0.449724224769707,1.21716072833102,0,0,0.575392274901621,1.45921704097532,0.549122826376163,8.62609239164127,0.372140947668503,1.24815069245824,1.51547326768267,1.4351793081753,0.964887042726734,2.40179147216586,4.16881105895066,3.42226450528254,2.8856664581782,1.40814148973101,2.1775813467436,2.14239276797412,5.65887578787617,3.62560831444239,3.98636441367795,5.74037167166954,3.11340297959902,2.93564469172023,3.90552458170081,1.50791283939272,0,0.983528546038072,2.75936746304733,8.0275294993896,10.7834751664827,2.29508923527346,3.7870639080656,4.10160685241134,3.90438744296638,4.09304455692318,5.73525115086125,4.23317480756549,8.20921939287614,5.66734982344852,3.50707029493574,3.95287777946523,7.39039027770156,3.26462195979018,3.73937767701236,5.04949573996086,6.76377504187395,0,1.21390318077491,1.81394134178851,1.69744571780308,1.47650946440386,2.15204603560749,4.9101375701962,2.90826983582004,3.56497378384721,2.84433082142234,3.16255825724996,1.03135543248187,3.40439605753788,5.04171063287669,4.2688365648309,6.00143698088458,3.54680467284547,4.99432689285798,4.60737257685939,5.48036908406279,6.10146440965647,5.2958017715955,1.54369878638473,9.23363016472288,6.29711264114032,7.53911561601948,9.90790455226033,11.4898629821543,3.78925087618806,8.52956389248344,0.341741761595705,3.30218988741156,1.29636169158798,1.31857919903284,0.410082683163076,0.228778173206523,0,0.139951452323658,0.414599921413271,4.77335309007557,2.68885594543965,4.67634774391752,4.42821897369385,4.59994251231831,4.58561383866973,4.98998081623837,4.29797969771747,3.14107130380836,3.36998930558661,1.24267862617385,0,6.87776111802302,6.6183396182839,10.3059129822345,11.6243841129958,12.3337971608268,12.9092962510329,11.9788034056434,5.03324853243412,0.966336483304024,0.288030006257865,0,4.05450430580328,1.54066435747241,0.649604114888975,0.537080087002444,0.596044064343795,0.120195449519969,0.443068581523732,0.605798699688886,0.304827226619999,0.100826185136841,0.292373642219257,0.192423683280659,0.350630706544707,3.17422537061296,4.21773311410723,2.78112955489375,4.36500002546604,9.07991091951295,6.00583921443782,5.12824547948342,7.71726164684637,0.501572104035363,7.34177395402186,8.28585425712918,10.8850147553485,14.6075204992134,8.90607275701835,6.0431511791176,8.77529250301348,16.2115633160719,12.6879874515577,10.8729665467882,4.56664329370377,8.77854721482268,5.46347538413229,5.83456120963906,5.8691685535835,4.41224420280034,4.88942801163553,7.2112270033613,6.4183841918363,5.05394423527595,5.57654459758527,5.09291121742406,5.80577346313271,7.49094283136971,7.23686908840727,5.23923060411381,8.22778714208474,5.40145817298374,4.94503080963968,4.85756436443511,6.17164654293748,5.50174999093946,6.19934093863034,5.81385666529314,5.36423468367385,5.58456412085065,6.21955107767427,6.83981249738391,7.4692262615224,5.61142271657738,6.05038592433288,8.66839444904958,5.32000356120596,6.04253680625267,7.33045121728337,11.7410971630835,4.21076895201735,5.15690529715916,5.54736162999646,5.29419405886837,2.55054619182464 | ||
|short_description=p2@Ctif | |||
}} | }} |
Latest revision as of 17:41, 1 October 2015
Short description: | p2@Ctif |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctif_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000065082_5end |
EntrezGene: | Ctif |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-15 | 23 |
ectodermal cell | 1.05e-14 | 44 |
neurectodermal cell | 1.05e-14 | 44 |
neural cell | 1.80e-14 | 43 |
neuron | 5.63e-14 | 33 |
neuronal stem cell | 5.63e-14 | 33 |
neuroblast | 5.63e-14 | 33 |
electrically signaling cell | 5.63e-14 | 33 |
electrically responsive cell | 3.41e-13 | 39 |
electrically active cell | 3.41e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.32e-27 | 73 |
nervous system | 2.97e-26 | 75 |
ectoderm-derived structure | 4.17e-25 | 95 |
ectoderm | 4.17e-25 | 95 |
presumptive ectoderm | 4.17e-25 | 95 |
regional part of nervous system | 1.74e-23 | 54 |
neural tube | 5.33e-22 | 52 |
neural rod | 5.33e-22 | 52 |
future spinal cord | 5.33e-22 | 52 |
neural keel | 5.33e-22 | 52 |
ecto-epithelium | 5.38e-21 | 73 |
neurectoderm | 1.41e-19 | 64 |
neural plate | 1.41e-19 | 64 |
presumptive neural plate | 1.41e-19 | 64 |
gray matter | 2.50e-19 | 34 |
brain | 1.77e-18 | 47 |
future brain | 1.77e-18 | 47 |
regional part of brain | 4.24e-18 | 46 |
anterior neural tube | 3.21e-16 | 40 |
brain grey matter | 6.90e-16 | 29 |
regional part of telencephalon | 6.90e-16 | 29 |
telencephalon | 6.90e-16 | 29 |
regional part of forebrain | 8.55e-16 | 39 |
forebrain | 8.55e-16 | 39 |
future forebrain | 8.55e-16 | 39 |
structure with developmental contribution from neural crest | 9.94e-15 | 92 |
pre-chordal neural plate | 2.00e-14 | 49 |
cerebral cortex | 2.20e-11 | 21 |
cerebral hemisphere | 2.20e-11 | 21 |
pallium | 2.20e-11 | 21 |
regional part of cerebral cortex | 5.03e-09 | 17 |
anatomical conduit | 2.53e-07 | 122 |
tube | 2.71e-07 | 114 |