Personal tools

FFCP PHASE1:Mm9::chr19:6418733..6418810,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:6418733..6418810,+
|DHSsupport=NA
|short_description=p2@Nrxn2
|DPIdataset=NA
|description=CAGE_peak_2_at_Nrxn2_5end
|association_with_transcript=0bp_to_ENSMUST00000077182,ENSMUST00000113461,ENSMUST00000128272,NM_001205234,NM_001205235,NM_020253,uc008git.1,uc008giu.1,uc008giv.1_5end
|EntrezGene=18190
|EntrezGene=18190
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9Q5N7,E9PUN0,E9PUM9,E9Q9Z5,Q3UGZ9,Q6ZQ25
|UniProt=E9Q5N7,E9PUN0,E9PUM9,E9Q9Z5,Q3UGZ9,Q6ZQ25
|association_with_transcript=0bp_to_ENSMUST00000077182,ENSMUST00000113461,ENSMUST00000128272,NM_001205234,NM_001205235,NM_020253,uc008git.1,uc008giu.1,uc008giv.1_5end
|cluster_id=chr19:6418733..6418810,+
|description=CAGE_peak_2_at_Nrxn2_5end
|id=chr19:6418733..6418810,+
|ontology_enrichment_celltype=CL:0000221!1.26e-18!44;CL:0000133!1.26e-18!44;CL:0002319!1.84e-18!43;CL:0000540!1.67e-17!33;CL:0000047!1.67e-17!33;CL:0000031!1.67e-17!33;CL:0000404!1.67e-17!33;CL:0000117!1.99e-16!23;CL:0000337!1.99e-16!23;CL:0000055!4.62e-13!50;CL:0000393!3.19e-12!39;CL:0000211!3.19e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000540,2.77e-20,33;CL:0000047,2.77e-20,33;CL:0000031,2.77e-20,33;CL:0000404,2.77e-20,33;CL:0000221,1.76e-19,44;CL:0000133,1.76e-19,44;CL:0002319,2.82e-19,43;CL:0000117,5.11e-19,23;CL:0000337,5.11e-19,23;CL:0000393,4.88e-15,39;CL:0000211,4.88e-15,39;CL:0002321,6.39e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.76e-37!73;UBERON:0005743!4.76e-37!73;UBERON:0000073!6.21e-37!75;UBERON:0001016!6.21e-37!75;UBERON:0004121!7.04e-32!102;UBERON:0000924!7.04e-32!102;UBERON:0006601!7.04e-32!102;UBERON:0002346!9.06e-30!71;UBERON:0003075!9.06e-30!71;UBERON:0007284!9.06e-30!71;UBERON:0000033!3.51e-28!63;UBERON:0001049!8.14e-28!52;UBERON:0005068!8.14e-28!52;UBERON:0006241!8.14e-28!52;UBERON:0007135!8.14e-28!52;UBERON:0000955!5.00e-26!50;UBERON:0006238!5.00e-26!50;UBERON:0002616!3.39e-25!49;UBERON:0003056!1.03e-22!49;UBERON:0002020!7.41e-21!34;UBERON:0003080!4.99e-20!40;UBERON:0002780!2.36e-19!39;UBERON:0001890!2.36e-19!39;UBERON:0006240!2.36e-19!39;UBERON:0002791!6.84e-17!29;UBERON:0003528!6.84e-17!29;UBERON:0001893!6.84e-17!29;UBERON:0007811!4.71e-14!86;UBERON:0000153!8.47e-12!94;UBERON:0000956!2.96e-11!21;UBERON:0001869!2.96e-11!21;UBERON:0000203!2.96e-11!21;UBERON:0002619!2.76e-09!17;UBERON:0003076!2.93e-08!12;UBERON:0003057!2.93e-08!12;UBERON:0002021!2.73e-07!10;UBERON:0000411!2.73e-07!10;UBERON:0001950!2.73e-07!10;UBERON:0002420!5.41e-07!8;UBERON:0007245!5.41e-07!8;UBERON:0010009!5.41e-07!8;UBERON:0010011!5.41e-07!8;UBERON:0000454!5.41e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.31e-41,73;UBERON:0001016,1.19e-40,75;UBERON:0004121,7.07e-37,95;UBERON:0000924,7.07e-37,95;UBERON:0006601,7.07e-37,95;UBERON:0002346,4.82e-35,64;UBERON:0003075,4.82e-35,64;UBERON:0007284,4.82e-35,64;UBERON:0000073,1.25e-32,54;UBERON:0001049,8.97e-31,52;UBERON:0005068,8.97e-31,52;UBERON:0006241,8.97e-31,52;UBERON:0007135,8.97e-31,52;UBERON:0010371,1.55e-29,73;UBERON:0000955,3.22e-26,47;UBERON:0006238,3.22e-26,47;UBERON:0002616,2.82e-25,46;UBERON:0003056,6.63e-25,49;UBERON:0002020,1.52e-22,34;UBERON:0003080,1.01e-21,40;UBERON:0010314,1.59e-21,92;UBERON:0002780,6.11e-21,39;UBERON:0001890,6.11e-21,39;UBERON:0006240,6.11e-21,39;UBERON:0003528,5.85e-18,29;UBERON:0002791,5.85e-18,29;UBERON:0001893,5.85e-18,29;UBERON:0000956,1.80e-11,21;UBERON:0001869,1.80e-11,21;UBERON:0000203,1.80e-11,21;UBERON:0003076,1.99e-09,12;UBERON:0003057,1.99e-09,12;UBERON:0002619,3.47e-09,17;UBERON:0002021,2.72e-08,10;UBERON:0000411,2.72e-08,10;UBERON:0001950,2.72e-08,10;UBERON:0002420,6.06e-08,8;UBERON:0007245,6.06e-08,8;UBERON:0010009,6.06e-08,8;UBERON:0010011,6.06e-08,8;UBERON:0000454,6.06e-08,8
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,3.92445281484804,0.659058548203415,0.388859798148567,2.93971485413261,1.43752564364972,0,0,0.336093799142464,0,0,0,93.6725213779938,117.964988377663,112.188158420594,0,0,0.449949858640699,0,0,32.9560121570245,51.4852529130883,29.8626083448416,37.6666567945417,28.1835448210852,229.377740476254,197.456475610743,41.7693625322993,38.2423429362763,60.6684399162614,94.6996576594743,76.2293408368571,75.728020895328,103.926394731393,97.8917786545783,95.3271468118871,99.1099646454902,116.491860276558,97.4852820816049,178.544922797043,151.483468370246,93.1997229126503,0.605809546665472,1.058001841495,0,0,0,0,0,0,2.24711072210803,0,0,0,3.80277233397037,0,0,0,0,0,0,1.59857431606684,0,0,2.25530924795977,1.21786191324856,1.15307748628029,1.05505848386836,1.64624189989987,0,0,0,0,0,0,0,1.86391761218122,74.0735416439214,113.101221679266,0,0,0,0.127070227073065,76.9923886540789,64.0500843946077,98.3873577043728,64.8364714317191,76.7146371990992,73.3491797295247,82.0940791122854,0.305518091550949,0.124406970610093,0,4.20883711772948,1.30120442962704,3.90833577536904,4.32149111532838,7.08312643827861,12.246569847239,15.373646434182,18.646643187386,13.4525752784288,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,41.8476997642613,64.7270011865699,0,0,0.213288250535234,0.696710015581316,0.902072229254653,0.80673409849337,0.889512175379481,1.33157938278791,0.474529061544512,0.658795818896044,1.50801125280162,1.98956472041151,1.75467678407208,0,0.432276099749388,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,56.5138076757028,68.5688366564389,0,0,3.78609863299508,3.51394869866975,9.04778270477756,1.67278158566786,1.78238939265915,1.98153571552183,4.45291771842384,12.2747460322751,8.69633111482352,117.28228049396,0,0,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,2.04263763452273,3.42116078659489,4.01011919726539,2.35770738534752,1.77340233642274,4.63758925765383,7.89835298890181,11.5696680663548,0,0,0.441056796109924,0,0,0,0,0,0.582961673259701,54.5150387910898,0,0,0,0,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.648032044930808,1.04544148007234,1.09181281873089,1.07891477107857,1.65306911450672,0,0.518459893167171,0,0.56369293868419,0,0,0.583353565032143,1.6790777052105,0.844780627453891,0.58678619322877,0.651021924219751,2.41176492179135,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.386379188064381,0,0,0,0,97.1373169301354,87.4617949363636,93.3819686906216,87.8169761776244,65.082839378211,55.8991484068378,62.7770925215579,60.7933624352698,62.5336524398202,56.4358739809484,1.14166082342594,9.17757208822371,11.439151585527,9.72426868273176,5.8691685535835,8.08911437180062,9.77885602327107,9.47761263298913,11.8740107548972,10.6132828940795,12.4204856946217,9.43131706930381,9.73871677686777,11.6525777376862,10.0512070672323,11.4310485907938,13.6743504614929,10.6100071255038,12.3625770240992,12.0703114510206,7.54312355247914,7.27650805253284,9.77588378784016,10.0289027476307,9.31682866111773,10.6614405943512,9.51225458938417,7.89209134313529,10.3211126522855,9.53941861818155,11.2703267217965,11.4265199555654,5.32000356120596,9.91595783590182,11.7673032698496,46.7145780743959,12.8662384644975,16.545071161719,5.92993829413414,5.51478547798789,2.78241402744506
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,3.92445281484804,0.659058548203415,0.388859798148567,2.93971485413261,1.43752564364972,0,0,0.336093799142464,0,0,0,93.6725213779938,117.964988377663,112.188158420594,0,0,0.449949858640699,0,0,32.9560121570245,51.4852529130883,29.8626083448416,37.6666567945417,28.1835448210852,229.377740476254,197.456475610743,41.7693625322993,38.2423429362763,60.6684399162614,94.6996576594743,76.2293408368571,75.728020895328,103.926394731393,97.8917786545783,95.3271468118871,99.1099646454902,116.491860276558,97.4852820816049,178.544922797043,151.483468370246,93.1997229126503,0.605809546665472,1.058001841495,0,0,0,0,0,0,2.24711072210803,0,0,0,3.80277233397037,0,0,0,0,0,0,1.59857431606684,0,0,2.25530924795977,1.21786191324856,1.15307748628029,1.05505848386836,1.64624189989987,0,0,0,0,0,0,0,1.86391761218122,74.0735416439214,113.101221679266,0,0,0,0.127070227073065,76.9923886540789,64.0500843946077,98.3873577043728,64.8364714317191,76.7146371990992,73.3491797295247,82.0940791122854,0.305518091550949,0.124406970610093,0,4.20883711772948,1.30120442962704,3.90833577536904,4.32149111532838,7.08312643827861,12.246569847239,15.373646434182,18.646643187386,13.4525752784288,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,41.8476997642613,64.7270011865699,0,0,0.213288250535234,0.696710015581316,0.902072229254653,0.80673409849337,0.889512175379481,1.33157938278791,0.474529061544512,0.658795818896044,1.50801125280162,1.98956472041151,1.75467678407208,0,0.432276099749388,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,56.5138076757028,68.5688366564389,0,0,3.78609863299508,3.51394869866975,9.04778270477756,1.67278158566786,1.78238939265915,1.98153571552183,4.45291771842384,12.2747460322751,8.69633111482352,117.28228049396,0,0,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,2.04263763452273,3.42116078659489,4.01011919726539,2.35770738534752,1.77340233642274,4.63758925765383,7.89835298890181,11.5696680663548,0,0,0.441056796109924,0,0,0,0,0,0.582961673259701,54.5150387910898,0,0,0,0,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.648032044930808,1.04544148007234,1.09181281873089,1.07891477107857,1.65306911450672,0,0.518459893167171,0,0.56369293868419,0,0,0.583353565032143,1.6790777052105,0.844780627453891,0.58678619322877,0.651021924219751,2.41176492179135,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.386379188064381,0,0,0,0,97.1373169301354,87.4617949363636,93.3819686906216,87.8169761776244,65.082839378211,55.8991484068378,62.7770925215579,60.7933624352698,62.5336524398202,56.4358739809484,1.14166082342594,9.17757208822371,11.439151585527,9.72426868273176,5.8691685535835,8.08911437180062,9.77885602327107,9.47761263298913,11.8740107548972,10.6132828940795,12.4204856946217,9.43131706930381,9.73871677686777,11.6525777376862,10.0512070672323,11.4310485907938,13.6743504614929,10.6100071255038,12.3625770240992,12.0703114510206,7.54312355247914,7.27650805253284,9.77588378784016,10.0289027476307,9.31682866111773,10.6614405943512,9.51225458938417,7.89209134313529,10.3211126522855,9.53941861818155,11.2703267217965,11.4265199555654,5.32000356120596,9.91595783590182,11.7673032698496,46.7145780743959,12.8662384644975,16.545071161719,5.92993829413414,5.51478547798789,2.78241402744506
|short_description=p2@Nrxn2
}}
}}

Latest revision as of 03:09, 26 September 2015

Short description:p2@Nrxn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nrxn2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000077182, ENSMUST00000113461, ENSMUST00000128272, NM_001205234, NM_001205235, NM_020253, uc008git.1, uc008giu.1, uc008giv.1_5end
EntrezGene:Nrxn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nrxn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C393.67
Mouse Granule cells, donor2.CNhs12357.11731-123E3117.96
Mouse Granule cells, donor3.CNhs12108.11636-122C7112.19
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C832.96
Mouse Microglia, donor2.CNhs12634.11736-123E851.49
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1229.38
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5197.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D241.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D660.67
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D394.70
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F376.23
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D775.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4103.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F497.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D895.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E499.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5116.49
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I697.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6178.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6151.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E193.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B274.07
cerebellum, neonate N30.CNhs11135.1395-42I2113.10
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A476.99
corpus striatum, adult.CNhs10487.19-21D864.05
corpus striatum, neonate N00.CNhs11226.630-43F198.39
cortex, adult.CNhs10473.12-14D564.84
cortex, neonate N30.CNhs11107.1392-42F276.71
diencephalon, adult.CNhs10482.20-12F273.35
diencephalon, neonate N30.CNhs11201.1388-42B282.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C612.25
eyeball, neonate N01.CNhs11140.1532-43E715.37
eyeball, neonate N02.CNhs11205.1551-44G818.65
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E841.85
hippocampus, neonate N00.CNhs11228.627-43G164.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C256.51
medulla oblongata, neonate N30.CNhs11200.1396-42A368.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I9117.28
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C954.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A197.14
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A287.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A393.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D787.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A465.08
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.90
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A760.79
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A862.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A956.44
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H211.44
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F911.77
whole body, embryo E17.CNhs10517.475-3I546.71
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C216.55
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.77e-2033
neuronal stem cell2.77e-2033
neuroblast2.77e-2033
electrically signaling cell2.77e-2033
ectodermal cell1.76e-1944
neurectodermal cell1.76e-1944
neural cell2.82e-1943
CNS neuron (sensu Vertebrata)5.11e-1923
neuroblast (sensu Vertebrata)5.11e-1923
electrically responsive cell4.88e-1539
electrically active cell4.88e-1539
embryonic cell6.39e-0770

Uber anatomy
Ontology termp-valuen
central nervous system1.31e-4173
nervous system1.19e-4075
ectoderm-derived structure7.07e-3795
ectoderm7.07e-3795
presumptive ectoderm7.07e-3795
neurectoderm4.82e-3564
neural plate4.82e-3564
presumptive neural plate4.82e-3564
regional part of nervous system1.25e-3254
neural tube8.97e-3152
neural rod8.97e-3152
future spinal cord8.97e-3152
neural keel8.97e-3152
ecto-epithelium1.55e-2973
brain3.22e-2647
future brain3.22e-2647
regional part of brain2.82e-2546
pre-chordal neural plate6.63e-2549
gray matter1.52e-2234
anterior neural tube1.01e-2140
structure with developmental contribution from neural crest1.59e-2192
regional part of forebrain6.11e-2139
forebrain6.11e-2139
future forebrain6.11e-2139
brain grey matter5.85e-1829
regional part of telencephalon5.85e-1829
telencephalon5.85e-1829
cerebral cortex1.80e-1121
cerebral hemisphere1.80e-1121
pallium1.80e-1121
posterior neural tube1.99e-0912
chordal neural plate1.99e-0912
regional part of cerebral cortex3.47e-0917
occipital lobe2.72e-0810
visual cortex2.72e-0810
neocortex2.72e-0810
basal ganglion6.06e-088
nuclear complex of neuraxis6.06e-088
aggregate regional part of brain6.06e-088
collection of basal ganglia6.06e-088
cerebral subcortex6.06e-088
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:6418733..6418810,%2B&oldid=4229667"