FFCP PHASE1:Mm9::chr1:40142668..40142707,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:40142668..40142707,- to FFCP PHASE1:Mm9::chr1:40142668..40142707,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100047133 | |EntrezGene=100047133 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000122879,NR_037980,uc007att.1_5end | |||
|cluster_id=chr1:40142668..40142707,- | |||
|description=CAGE_peak_1_at_Gm16894_5end | |||
|id=chr1:40142668..40142707,- | |||
|ontology_enrichment_celltype=CL:0000540!1.58e-07!33;CL:0000047!1.58e-07!33;CL:0000031!1.58e-07!33;CL:0000404!1.58e-07!33;CL:0000117!2.98e-07!23;CL:0000337!2.98e-07!23;CL:0000393!8.51e-07!39;CL:0000211!8.51e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-09,23;CL:0000337,1.08e-09,23;CL:0000540,4.82e-07,33;CL:0000047,4.82e-07,33;CL:0000031,4.82e-07,33;CL:0000404,4.82e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.75e-16!73;UBERON:0005743!4.75e-16!73;UBERON:0004121!2.43e-15!102;UBERON:0000924!2.43e-15!102;UBERON:0006601!2.43e-15!102;UBERON:0000073!9.13e-15!75;UBERON:0001016!9.13e-15!75;UBERON:0001049!6.01e-14!52;UBERON:0005068!6.01e-14!52;UBERON:0006241!6.01e-14!52;UBERON:0007135!6.01e-14!52;UBERON:0000955!2.38e-13!50;UBERON:0006238!2.38e-13!50;UBERON:0002616!7.29e-13!49;UBERON:0000033!9.49e-13!63;UBERON:0002346!7.47e-12!71;UBERON:0003075!7.47e-12!71;UBERON:0007284!7.47e-12!71;UBERON:0002020!2.12e-11!34;UBERON:0003080!6.86e-11!40;UBERON:0003056!2.25e-10!49;UBERON:0002780!2.38e-10!39;UBERON:0001890!2.38e-10!39;UBERON:0006240!2.38e-10!39;UBERON:0007811!2.96e-10!86;UBERON:0002791!1.77e-09!29;UBERON:0003528!1.77e-09!29;UBERON:0001893!1.77e-09!29;UBERON:0000153!8.62e-09!94;UBERON:0002021!5.86e-07!10;UBERON:0000411!5.86e-07!10;UBERON:0001950!5.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.79e-22,54;UBERON:0001049,9.16e-21,52;UBERON:0005068,9.16e-21,52;UBERON:0006241,9.16e-21,52;UBERON:0007135,9.16e-21,52;UBERON:0001017,1.07e-19,73;UBERON:0001016,1.11e-18,75;UBERON:0004121,1.69e-18,95;UBERON:0000924,1.69e-18,95;UBERON:0006601,1.69e-18,95;UBERON:0000955,9.44e-18,47;UBERON:0006238,9.44e-18,47;UBERON:0010371,1.33e-17,73;UBERON:0002616,4.78e-17,46;UBERON:0002346,1.62e-16,64;UBERON:0003075,1.62e-16,64;UBERON:0007284,1.62e-16,64;UBERON:0002020,4.58e-16,34;UBERON:0003080,3.88e-15,40;UBERON:0002780,2.39e-14,39;UBERON:0001890,2.39e-14,39;UBERON:0006240,2.39e-14,39;UBERON:0003528,3.00e-13,29;UBERON:0002791,3.00e-13,29;UBERON:0001893,3.00e-13,29;UBERON:0003056,9.29e-12,49;UBERON:0002021,1.80e-09,10;UBERON:0000411,1.80e-09,10;UBERON:0001950,1.80e-09,10;UBERON:0010314,3.61e-09,92;UBERON:0000956,5.03e-08,21;UBERON:0001869,5.03e-08,21;UBERON:0000203,5.03e-08,21;UBERON:0002619,3.30e-07,17;UBERON:0002420,6.34e-07,8;UBERON:0007245,6.34e-07,8;UBERON:0010009,6.34e-07,8;UBERON:0010011,6.34e-07,8;UBERON:0000454,6.34e-07,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0.315462165358238,0.274228867211478,0,1.27564935226605,0.695036658406197,1.30599894569468,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,3.34825304589526,3.906676722619,4.18818995179039,6.47054636834116,2.73218193983378,6.311634589405,0.629484089877886,0.304130793658544,0.550640256485045,0,0,0.439372365468944,0,0.419959264876088,0,0,0.725362142011344,0,0,1.43266719969378,1.03134418455488,1.41621522601718,2.11596391708813,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,1.24427534770173,1.4850653216486,0.420649922702764,1.14260393761521,4.19650227808066,0.61245399607477,1.0543001812006,0,2.20231761998777,3.44755812830007,4.14737639791857,1.31886287730194,2.37867873366265,3.64639359389732,4.18774498502071,5.6276261003168,5.34793867218835,1.47314292736834,3.70166370077668,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0.340860645156116,0.259786004602869,0,0.14084341977668,2.56652954828636,5.09610479413291,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0,0.461230994512117,0.904335843315735,0.705532242814229,0.376999773989026,1.48316980640624,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.92780797011547,6.70229461803056,0.510914110417183,0.11981512450592,0,0.635351135365324,5.24267237916879,5.94750783664214,1.63350657746724,6.25767552692195,6.39288643325826,7.2725815595846,6.48965052271031,0.407357455401265,1.7416975885413,0.505445516867349,0.631325567659422,0.130120442962704,0.229902104433473,0.900310649026746,0.753524089178575,1.08858398642125,0.768682321709099,0.843315521037559,1.29351685369508,0,0,0.703804496655795,0.657587197282725,0,0.348252166522167,1.64625709126355,1.59227413454795,0.702213187313235,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0.946978942340841,0.393528463494808,0.154267112887378,0.465067889500816,0,0.583826711835847,0.329119699826961,0.492502392237286,0,0.292399974850665,1.09775057645525,0.268412837520744,4.41608891984667,1.9551876352064,0,0.528901133327089,0,0.464473343720877,0.77320476793256,0.605050573870028,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.913988100877831,0,0.203651327845314,0.581857461502877,0.350679099451593,0.505892296994058,0.885660887877613,1.09899109488962,1.48076596706161,0.296452627087149,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.837531287209079,0,0,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0,0,0,0,0.983528546038072,0,4.97706828962155,6.91548950893999,0.163934945376675,1.51482556322624,0.315508219416257,1.56175497718655,0.646270193198397,0.716906393857656,0.891194696329576,0.566153061577665,1.21443210502468,1.46127928955656,0.790575555893047,3.21321316421807,0.567760340833074,0.712262414669021,0.651547837414304,0.329940245945071,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0.614870295887855,1.03371317267288,1.09060118843252,0.712994756769443,0.316036757935816,0,0,5.44703369206061,0,0.517434735131018,0.214337035031592,0.532020700926821,1.42695054081656,1.31639216481697,2.13125464380219,5.63212099352905,2.75381692122966,1.7642271844397,5.60613260001032,1.93757312035087,1.68876189798836,1.90995750405018,2.62625439592098,1.45740418314925,4.26478194624172,0.512612642393558,0.82554747185289,1.85194527369712,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.690999869022119,0.954670618015114,0,0.813277868507395,1.29606408986162,0.627264888043406,1.31017538247707,0.404593039154462,1.07449492442937,1.30877970992015,1.16653475962614,0.621339313086926,0,0.598066184175915,0,0.388902376688095,0.774958940866387,0,0.234714477291508,0.13020438484395,0,0.241584120826006,0.576060012515731,0.316011120628178,1.82452693761148,0.821687657318618,1.03936658382236,1.61124026100733,1.58945083825012,0.480781798079875,1.32920574457119,0.605798699688886,0.533447646584999,0.302478555410522,0.292373642219257,0.288635524920988,0.818138315270983,1.81384306892169,0,0,0.335769232728157,2.31827512838629,2.25218970541418,0.183151624267265,2.35805216986972,6.52043735245972,4.51801474093653,3.68260189205742,5.15605962095457,2.749650917499,1.37016503954128,9.06472676867641,10.8003600037089,7.20513925158753,2.71885445390523,8.28416498802912,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.628839487883947,1.10306105070008,0.888986911206461,1.03017528619447,1.28367683836726,1.26348605881899,1.52087579934144,2.07488975524684,0.749132059759059,0.768301828858431,0.861532034334199,0,1.15884325944855,1.35036454324594,1.23625770240992,1.47198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.872078499793971,0.376437521661322,0.846146078916765,0.182927972872773,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,1.18205378850676,1.22769312950907,0.929621047115796,0.771626443924566,1.49886346762768,1.16965804222704,0.429742108096597,0.57386499620653,1.32354851471709,1.15933917810211 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0.315462165358238,0.274228867211478,0,1.27564935226605,0.695036658406197,1.30599894569468,0.319984845586813,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,3.34825304589526,3.906676722619,4.18818995179039,6.47054636834116,2.73218193983378,6.311634589405,0.629484089877886,0.304130793658544,0.550640256485045,0,0,0.439372365468944,0,0.419959264876088,0,0,0.725362142011344,0,0,1.43266719969378,1.03134418455488,1.41621522601718,2.11596391708813,1.26766280701236,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,1.24427534770173,1.4850653216486,0.420649922702764,1.14260393761521,4.19650227808066,0.61245399607477,1.0543001812006,0,2.20231761998777,3.44755812830007,4.14737639791857,1.31886287730194,2.37867873366265,3.64639359389732,4.18774498502071,5.6276261003168,5.34793867218835,1.47314292736834,3.70166370077668,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0.340860645156116,0.259786004602869,0,0.14084341977668,2.56652954828636,5.09610479413291,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0,0.461230994512117,0.904335843315735,0.705532242814229,0.376999773989026,1.48316980640624,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.92780797011547,6.70229461803056,0.510914110417183,0.11981512450592,0,0.635351135365324,5.24267237916879,5.94750783664214,1.63350657746724,6.25767552692195,6.39288643325826,7.2725815595846,6.48965052271031,0.407357455401265,1.7416975885413,0.505445516867349,0.631325567659422,0.130120442962704,0.229902104433473,0.900310649026746,0.753524089178575,1.08858398642125,0.768682321709099,0.843315521037559,1.29351685369508,0,0,0.703804496655795,0.657587197282725,0,0.348252166522167,1.64625709126355,1.59227413454795,0.702213187313235,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0.946978942340841,0.393528463494808,0.154267112887378,0.465067889500816,0,0.583826711835847,0.329119699826961,0.492502392237286,0,0.292399974850665,1.09775057645525,0.268412837520744,4.41608891984667,1.9551876352064,0,0.528901133327089,0,0.464473343720877,0.77320476793256,0.605050573870028,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,0.189667900953082,0.913988100877831,0,0.203651327845314,0.581857461502877,0.350679099451593,0.505892296994058,0.885660887877613,1.09899109488962,1.48076596706161,0.296452627087149,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0.486405680325106,0,1.43768206527355,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.837531287209079,0,0,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0,0,0,0,0.983528546038072,0,4.97706828962155,6.91548950893999,0.163934945376675,1.51482556322624,0.315508219416257,1.56175497718655,0.646270193198397,0.716906393857656,0.891194696329576,0.566153061577665,1.21443210502468,1.46127928955656,0.790575555893047,3.21321316421807,0.567760340833074,0.712262414669021,0.651547837414304,0.329940245945071,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0.614870295887855,1.03371317267288,1.09060118843252,0.712994756769443,0.316036757935816,0,0,5.44703369206061,0,0.517434735131018,0.214337035031592,0.532020700926821,1.42695054081656,1.31639216481697,2.13125464380219,5.63212099352905,2.75381692122966,1.7642271844397,5.60613260001032,1.93757312035087,1.68876189798836,1.90995750405018,2.62625439592098,1.45740418314925,4.26478194624172,0.512612642393558,0.82554747185289,1.85194527369712,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.690999869022119,0.954670618015114,0,0.813277868507395,1.29606408986162,0.627264888043406,1.31017538247707,0.404593039154462,1.07449492442937,1.30877970992015,1.16653475962614,0.621339313086926,0,0.598066184175915,0,0.388902376688095,0.774958940866387,0,0.234714477291508,0.13020438484395,0,0.241584120826006,0.576060012515731,0.316011120628178,1.82452693761148,0.821687657318618,1.03936658382236,1.61124026100733,1.58945083825012,0.480781798079875,1.32920574457119,0.605798699688886,0.533447646584999,0.302478555410522,0.292373642219257,0.288635524920988,0.818138315270983,1.81384306892169,0,0,0.335769232728157,2.31827512838629,2.25218970541418,0.183151624267265,2.35805216986972,6.52043735245972,4.51801474093653,3.68260189205742,5.15605962095457,2.749650917499,1.37016503954128,9.06472676867641,10.8003600037089,7.20513925158753,2.71885445390523,8.28416498802912,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.628839487883947,1.10306105070008,0.888986911206461,1.03017528619447,1.28367683836726,1.26348605881899,1.52087579934144,2.07488975524684,0.749132059759059,0.768301828858431,0.861532034334199,0,1.15884325944855,1.35036454324594,1.23625770240992,1.47198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.872078499793971,0.376437521661322,0.846146078916765,0.182927972872773,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,1.18205378850676,1.22769312950907,0.929621047115796,0.771626443924566,1.49886346762768,1.16965804222704,0.429742108096597,0.57386499620653,1.32354851471709,1.15933917810211 | ||
|short_description=p1@Gm16894 | |||
}} | }} |
Latest revision as of 03:20, 27 September 2015
Short description: | p1@Gm16894 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm16894_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000122879, NR_037980, uc007att.1_5end |
EntrezGene: | Gm16894 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-09 | 23 |
neuron | 4.82e-07 | 33 |
neuronal stem cell | 4.82e-07 | 33 |
neuroblast | 4.82e-07 | 33 |
electrically signaling cell | 4.82e-07 | 33 |