FFCP PHASE1:Mm9::chr2:119798171..119798185,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:119798171..119798185,+ to FFCP PHASE1:Mm9::chr2:119798171..119798185,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26390 | |EntrezGene=26390 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=933 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NS57,E9QJR3 | |UniProt=Q6NS57,E9QJR3 | ||
|association_with_transcript=-249bp_to_ENSMUST00000066058,ENSMUST00000102506,NM_011941,uc008luw.2,uc008lux.2_5end | |||
|cluster_id=chr2:119798171..119798185,+ | |||
|description=CAGE_peak_2_at_Mapkbp1_5end | |||
|id=chr2:119798171..119798185,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.81e-13!63;UBERON:0003056!4.43e-12!49;UBERON:0001049!4.54e-12!52;UBERON:0005068!4.54e-12!52;UBERON:0006241!4.54e-12!52;UBERON:0007135!4.54e-12!52;UBERON:0000955!5.68e-12!50;UBERON:0006238!5.68e-12!50;UBERON:0002616!2.24e-11!49;UBERON:0003080!6.14e-11!40;UBERON:0002780!1.64e-10!39;UBERON:0001890!1.64e-10!39;UBERON:0006240!1.64e-10!39;UBERON:0002346!5.47e-10!71;UBERON:0003075!5.47e-10!71;UBERON:0007284!5.47e-10!71;UBERON:0002020!3.00e-08!34;UBERON:0002791!5.14e-08!29;UBERON:0003528!5.14e-08!29;UBERON:0001893!5.14e-08!29;UBERON:0004121!5.16e-08!102;UBERON:0000924!5.16e-08!102;UBERON:0006601!5.16e-08!102;UBERON:0000153!1.70e-07!94;UBERON:0007811!4.72e-07!86;UBERON:0002021!7.59e-07!10;UBERON:0000411!7.59e-07!10;UBERON:0001950!7.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,7.91e-15,73;UBERON:0001049,2.72e-12,52;UBERON:0005068,2.72e-12,52;UBERON:0006241,2.72e-12,52;UBERON:0007135,2.72e-12,52;UBERON:0003056,2.80e-12,49;UBERON:0000955,3.22e-12,47;UBERON:0006238,3.22e-12,47;UBERON:0000073,6.13e-12,54;UBERON:0002346,1.24e-11,64;UBERON:0003075,1.24e-11,64;UBERON:0007284,1.24e-11,64;UBERON:0002616,1.34e-11,46;UBERON:0003080,4.21e-11,40;UBERON:0002780,1.15e-10,39;UBERON:0001890,1.15e-10,39;UBERON:0006240,1.15e-10,39;UBERON:0004121,1.81e-09,95;UBERON:0000924,1.81e-09,95;UBERON:0006601,1.81e-09,95;UBERON:0002020,2.40e-08,34;UBERON:0003528,4.23e-08,29;UBERON:0002791,4.23e-08,29;UBERON:0001893,4.23e-08,29;UBERON:0010314,4.03e-07,92;UBERON:0002021,5.34e-07,10;UBERON:0000411,5.34e-07,10;UBERON:0001950,5.34e-07,10;UBERON:0001017,9.49e-07,73 | |||
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| ||
|short_description=p2@Mapkbp1 | |||
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Latest revision as of 14:20, 25 September 2015
Short description: | p2@Mapkbp1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mapkbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:933 |
Association with transcript: | -249bp_to_ENSMUST00000066058, ENSMUST00000102506, NM_011941, uc008luw.2, uc008lux.2_5end |
EntrezGene: | Mapkbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 7.91e-15 | 73 |
neural tube | 2.72e-12 | 52 |
neural rod | 2.72e-12 | 52 |
future spinal cord | 2.72e-12 | 52 |
neural keel | 2.72e-12 | 52 |
pre-chordal neural plate | 2.80e-12 | 49 |
brain | 3.22e-12 | 47 |
future brain | 3.22e-12 | 47 |
regional part of nervous system | 6.13e-12 | 54 |
neurectoderm | 1.24e-11 | 64 |
neural plate | 1.24e-11 | 64 |
presumptive neural plate | 1.24e-11 | 64 |
regional part of brain | 1.34e-11 | 46 |
anterior neural tube | 4.21e-11 | 40 |
regional part of forebrain | 1.15e-10 | 39 |
forebrain | 1.15e-10 | 39 |
future forebrain | 1.15e-10 | 39 |
ectoderm-derived structure | 1.81e-09 | 95 |
ectoderm | 1.81e-09 | 95 |
presumptive ectoderm | 1.81e-09 | 95 |
gray matter | 2.40e-08 | 34 |
brain grey matter | 4.23e-08 | 29 |
regional part of telencephalon | 4.23e-08 | 29 |
telencephalon | 4.23e-08 | 29 |
structure with developmental contribution from neural crest | 4.03e-07 | 92 |
occipital lobe | 5.34e-07 | 10 |
visual cortex | 5.34e-07 | 10 |
neocortex | 5.34e-07 | 10 |
central nervous system | 9.49e-07 | 73 |