FFCP PHASE1:Mm9::chr2:172973544..172973561,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:172973544..172973561,- to FFCP PHASE1:Mm9::chr2:172973544..172973561,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=120 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:172973544..172973561,- | |||
|description=CAGE_peak_at_chr2:172973544..172973561,- | |||
|id=chr2:172973544..172973561,- | |||
|ontology_enrichment_celltype=CL:0000181!7.00e-08!5;CL:0000417!7.00e-08!5;CL:0000668!7.00e-08!5;CL:0000412!7.00e-08!5;CL:0000182!7.00e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.16e-13,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.66e-24!22;UBERON:0007499!8.66e-24!22;UBERON:0006925!8.66e-24!22;UBERON:0009497!8.66e-24!22;UBERON:0000015!8.66e-24!22;UBERON:0002423!8.66e-24!22;UBERON:0006235!8.66e-24!22;UBERON:0008835!8.66e-24!22;UBERON:0003894!8.66e-24!22;UBERON:0004161!8.66e-24!22;UBERON:0008836!8.66e-24!22;UBERON:0009854!1.17e-22!23;UBERON:0009856!1.17e-22!23;UBERON:0002365!1.14e-20!25;UBERON:0002330!1.14e-20!25;UBERON:0005172!6.57e-13!49;UBERON:0005173!6.57e-13!49;UBERON:0002417!6.57e-13!49;UBERON:0000916!6.57e-13!49;UBERON:0005256!1.09e-11!47;UBERON:0003914!5.90e-10!47;UBERON:0005057!5.32e-09!51;UBERON:0009569!6.63e-09!66;UBERON:0002368!1.25e-08!60;UBERON:0003929!3.48e-08!55;UBERON:0000949!5.54e-08!72;UBERON:0002530!8.87e-08!65;UBERON:0004921!1.71e-07!126;UBERON:0004185!1.71e-07!126;UBERON:0005177!2.10e-07!85;UBERON:0001007!2.55e-07!128;UBERON:0001555!2.55e-07!128;UBERON:0007026!2.55e-07!128;UBERON:0004119!3.75e-07!130;UBERON:0000925!3.75e-07!130;UBERON:0006595!3.75e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-36,22;UBERON:0007499,2.09e-36,22;UBERON:0006925,2.09e-36,22;UBERON:0009497,2.09e-36,22;UBERON:0000015,2.09e-36,22;UBERON:0002423,2.09e-36,22;UBERON:0006235,2.09e-36,22;UBERON:0008835,2.09e-36,22;UBERON:0003894,2.09e-36,22;UBERON:0004161,2.09e-36,22;UBERON:0008836,2.09e-36,22;UBERON:0009854,8.73e-35,23;UBERON:0009856,8.73e-35,23;UBERON:0002365,6.20e-32,25;UBERON:0002330,6.20e-32,25;UBERON:0005256,2.56e-17,45;UBERON:0003914,1.55e-16,47;UBERON:0005172,8.07e-16,49;UBERON:0005173,8.07e-16,49;UBERON:0002417,8.07e-16,49;UBERON:0000916,8.07e-16,49;UBERON:0003929,5.60e-14,55;UBERON:0002368,1.01e-12,60;UBERON:0003104,1.70e-12,61;UBERON:0009142,1.70e-12,61;UBERON:0002530,1.17e-11,65;UBERON:0000490,1.83e-11,66;UBERON:0009569,1.83e-11,66;UBERON:0005911,6.45e-11,69;UBERON:0000949,2.05e-10,72;UBERON:0005177,2.18e-09,79;UBERON:0001041,2.96e-09,80;UBERON:0002100,4.30e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,6.47643829965381,7.79731700937203,9.40856462904405,1.68533304158102,0,0,0,0,0,0,0,0,0,0,4.68153906848146,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754005626400808,0.596869416123452,0.779856348476481,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,23.6717431091552,3.0201755450689,0,4.09355042435354,1.87222603868736,4.54641980304801,2.15276896226295,48.2443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,6.47643829965381,7.79731700937203,9.40856462904405,1.68533304158102,0,0,0,0,0,0,0,0,0,0,4.68153906848146,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754005626400808,0.596869416123452,0.779856348476481,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,23.6717431091552,3.0201755450689,0,4.09355042435354,1.87222603868736,4.54641980304801,2.15276896226295,48.2443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr2:172973544..172973561,- | |||
}} | }} |
Latest revision as of 15:51, 4 August 2015
Short description: | p@chr2:172973544..172973561, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:172973544..172973561, - |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.16e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-36 | 22 |
epithelial sac | 2.09e-36 | 22 |
digestive gland | 2.09e-36 | 22 |
epithelium of foregut-midgut junction | 2.09e-36 | 22 |
anatomical boundary | 2.09e-36 | 22 |
hepatobiliary system | 2.09e-36 | 22 |
foregut-midgut junction | 2.09e-36 | 22 |
hepatic diverticulum | 2.09e-36 | 22 |
liver primordium | 2.09e-36 | 22 |
septum transversum | 2.09e-36 | 22 |
liver bud | 2.09e-36 | 22 |
digestive tract diverticulum | 8.73e-35 | 23 |
sac | 8.73e-35 | 23 |
exocrine gland | 6.20e-32 | 25 |
exocrine system | 6.20e-32 | 25 |
trunk mesenchyme | 2.56e-17 | 45 |
epithelial tube | 1.55e-16 | 47 |
abdomen element | 8.07e-16 | 49 |
abdominal segment element | 8.07e-16 | 49 |
abdominal segment of trunk | 8.07e-16 | 49 |
abdomen | 8.07e-16 | 49 |
gut epithelium | 5.60e-14 | 55 |
endocrine gland | 1.01e-12 | 60 |
mesenchyme | 1.70e-12 | 61 |
entire embryonic mesenchyme | 1.70e-12 | 61 |
gland | 1.17e-11 | 65 |
unilaminar epithelium | 1.83e-11 | 66 |
subdivision of trunk | 1.83e-11 | 66 |
endo-epithelium | 6.45e-11 | 69 |
endocrine system | 2.05e-10 | 72 |
trunk region element | 2.18e-09 | 79 |
foregut | 2.96e-09 | 80 |
trunk | 4.30e-08 | 90 |