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FFCP PHASE1:Mm9::chr2:180773937..180773987,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:180773937..180773987,-
|DHSsupport=NA
|short_description=p1@Chrna4
|DPIdataset=NA
|description=CAGE_peak_1_at_Chrna4_5end
|association_with_transcript=-7bp_to_ENSMUST00000135766_5end
|EntrezGene=11438
|EntrezGene=11438
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=E0CZ39
|UniProt=E0CZ39
|association_with_transcript=-7bp_to_ENSMUST00000135766_5end
|cluster_id=chr2:180773937..180773987,-
|description=CAGE_peak_1_at_Chrna4_5end
|id=chr2:180773937..180773987,-
|ontology_enrichment_celltype=CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000221!1.12e-14!44;CL:0000133!1.12e-14!44;CL:0002319!1.17e-14!43;CL:0000117!3.12e-12!23;CL:0000337!3.12e-12!23;CL:0000393!2.10e-10!39;CL:0000211!2.10e-10!39;CL:0000055!7.25e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.31e-17,33;CL:0000047,2.31e-17,33;CL:0000031,2.31e-17,33;CL:0000404,2.31e-17,33;CL:0002319,3.58e-16,43;CL:0000221,1.69e-15,44;CL:0000133,1.69e-15,44;CL:0000117,1.11e-13,23;CL:0000337,1.11e-13,23;CL:0000393,6.98e-13,39;CL:0000211,6.98e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.72e-29!102;UBERON:0000924!1.72e-29!102;UBERON:0006601!1.72e-29!102;UBERON:0001017!7.92e-28!73;UBERON:0005743!7.92e-28!73;UBERON:0000073!5.58e-27!75;UBERON:0001016!5.58e-27!75;UBERON:0002346!1.74e-24!71;UBERON:0003075!1.74e-24!71;UBERON:0007284!1.74e-24!71;UBERON:0000033!1.26e-18!63;UBERON:0001049!1.68e-17!52;UBERON:0005068!1.68e-17!52;UBERON:0006241!1.68e-17!52;UBERON:0007135!1.68e-17!52;UBERON:0003056!8.39e-17!49;UBERON:0002616!1.09e-15!49;UBERON:0000955!1.18e-15!50;UBERON:0006238!1.18e-15!50;UBERON:0002020!4.85e-14!34;UBERON:0003080!8.22e-13!40;UBERON:0002780!3.29e-12!39;UBERON:0001890!3.29e-12!39;UBERON:0006240!3.29e-12!39;UBERON:0002791!9.08e-11!29;UBERON:0003528!9.08e-11!29;UBERON:0001893!9.08e-11!29;UBERON:0007811!9.43e-09!86;UBERON:0000153!5.26e-08!94;UBERON:0002021!8.87e-07!10;UBERON:0000411!8.87e-07!10;UBERON:0001950!8.87e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-28,73;UBERON:0001016,2.97e-27,75;UBERON:0004121,1.22e-26,95;UBERON:0000924,1.22e-26,95;UBERON:0006601,1.22e-26,95;UBERON:0002346,1.01e-23,64;UBERON:0003075,1.01e-23,64;UBERON:0007284,1.01e-23,64;UBERON:0010371,2.87e-19,73;UBERON:0000073,4.49e-19,54;UBERON:0001049,3.29e-17,52;UBERON:0005068,3.29e-17,52;UBERON:0006241,3.29e-17,52;UBERON:0007135,3.29e-17,52;UBERON:0003056,1.26e-16,49;UBERON:0002020,7.07e-16,34;UBERON:0010314,3.43e-13,92;UBERON:0002616,1.24e-12,46;UBERON:0003080,2.16e-12,40;UBERON:0000955,4.19e-12,47;UBERON:0006238,4.19e-12,47;UBERON:0003528,8.54e-12,29;UBERON:0002791,8.54e-12,29;UBERON:0001893,8.54e-12,29;UBERON:0002780,1.11e-11,39;UBERON:0001890,1.11e-11,39;UBERON:0006240,1.11e-11,39;UBERON:0002021,2.62e-08,10;UBERON:0000411,2.62e-08,10;UBERON:0001950,2.62e-08,10;UBERON:0002619,7.86e-08,17;UBERON:0002420,2.45e-07,8;UBERON:0007245,2.45e-07,8;UBERON:0010009,2.45e-07,8;UBERON:0010011,2.45e-07,8;UBERON:0000454,2.45e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,0.439372365468944,0,2.37976916763116,2.87505128729943,0,0,0,0,0,0,20.0293296251002,19.0436752537932,15.8457850876545,0.677689064138264,0,0,0,0,3.29560121570245,3.45796474789399,0.103689612308478,0.270011876663381,0.630974884054146,18.852964970651,12.589506834242,1.34739879136449,1.82106394934649,1.83843757322004,22.0231761998777,28.601963731082,26.5739302533301,21.4974649000216,18.5719916512892,12.5019208933622,19.821992929098,9.00420176050688,14.6686317865738,17.0884579574727,16.657486653495,14.5391567743734,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,1.37020655662872,0,3.41416919849097,1.04091196059682,1.52232739156071,0.691846491768175,1.20578112442098,0.940709657085638,0.753999547978053,0,0,0,0.485300549842228,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,12.1330417917906,5.94750783664214,1.50785222535437,7.82209440865244,7.67146371990992,20.3632283668369,11.6813709408785,1.01839363850316,0.124406970610093,0,0.631325567659422,6.63614259109789,8.73627996847197,8.46292010085141,4.82255417074288,7.34794190834341,4.09963904911519,5.43470002446427,2.32833033665114,0,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,2.73376933133365,1.74937841044784,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,1.14248512609729,2.25415471346161,0.610953983535943,1.35766741017338,0.701358198903186,5.50157872981038,6.4948465111025,4.55296310739987,3.08492909804501,0.296452627087149,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,8.34863067936518,12.5416504653657,0,0.252470927204373,4.41711507182759,6.24701990874622,4.73931475012158,2.15071918157297,1.78238939265915,2.54768877709949,3.64329631507405,2.63030272120181,3.55759000151871,0.642642632843614,2.2710413633323,2.31485284767432,1.14020871547503,0.494910368917606,0,4.61283208694465,2.41858845571801,0.377210159511796,0.590603785761546,1.22974059177571,0,0,1.06949213515416,0,0,0,0.680879211507576,2.16073312837572,1.68166288917581,1.07168517515796,0.177340233642274,1.07021290561242,0.658196082408484,0.608929898229199,0.469343416127421,0.42366414172764,0,0.98931751764888,0,0.361877549568935,0.954978752025092,1.96969079694074,0,12.0526446306831,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,1.21991680276109,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.247960367176008,0,0,0,0,1.04661582230785,0.827292452285488,0.972255941720238,1.54991788173277,0.337912250981556,1.05621514781179,1.8228613878153,1.67774951081137,0.241584120826006,0.576060012515731,0,1.01362607645082,0.410843828659309,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,1.33191572024439,0.448569283047378,0.167884616364078,0,0,0.183151624267265,0,0,11.8597886949584,7.82552902062201,10.8850147553485,8.93636548187176,7.53590771747707,2.2661816921691,8.10027000278167,7.20513925158753,6.79713613476307,11.9084871702919,2.38710899443606,7.18244772121856,2.39027048055788,1.94485373654635,2.72497111416377,1.10306105070008,0.222246727801615,1.64828045791115,3.20919209591815,1.76888048234658,2.28131369901216,1.13175804831646,1.591905626988,1.40855335290712,1.83793500657962,0.952587382566147,1.50649623728312,2.89363830695558,2.06042950401653,0.735994600671987,1.02860775715625,1.77475806159337,0.476872379894642,1.0174249164263,1.50575008664529,1.4384483341585,2.0122077016005,0.789209134313529,1.7654534799962,2.24456908663095,2.25406534435931,1.18205378850676,2.45538625901814,1.85924209423159,1.35034627686799,4.24677982494508,1.16965804222704,1.71896843238639,0.57386499620653,1.98532277207564,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,0.439372365468944,0,2.37976916763116,2.87505128729943,0,0,0,0,0,0,20.0293296251002,19.0436752537932,15.8457850876545,0.677689064138264,0,0,0,0,3.29560121570245,3.45796474789399,0.103689612308478,0.270011876663381,0.630974884054146,18.852964970651,12.589506834242,1.34739879136449,1.82106394934649,1.83843757322004,22.0231761998777,28.601963731082,26.5739302533301,21.4974649000216,18.5719916512892,12.5019208933622,19.821992929098,9.00420176050688,14.6686317865738,17.0884579574727,16.657486653495,14.5391567743734,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,1.37020655662872,0,3.41416919849097,1.04091196059682,1.52232739156071,0.691846491768175,1.20578112442098,0.940709657085638,0.753999547978053,0,0,0,0.485300549842228,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,12.1330417917906,5.94750783664214,1.50785222535437,7.82209440865244,7.67146371990992,20.3632283668369,11.6813709408785,1.01839363850316,0.124406970610093,0,0.631325567659422,6.63614259109789,8.73627996847197,8.46292010085141,4.82255417074288,7.34794190834341,4.09963904911519,5.43470002446427,2.32833033665114,0,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,2.73376933133365,1.74937841044784,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,1.14248512609729,2.25415471346161,0.610953983535943,1.35766741017338,0.701358198903186,5.50157872981038,6.4948465111025,4.55296310739987,3.08492909804501,0.296452627087149,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,8.34863067936518,12.5416504653657,0,0.252470927204373,4.41711507182759,6.24701990874622,4.73931475012158,2.15071918157297,1.78238939265915,2.54768877709949,3.64329631507405,2.63030272120181,3.55759000151871,0.642642632843614,2.2710413633323,2.31485284767432,1.14020871547503,0.494910368917606,0,4.61283208694465,2.41858845571801,0.377210159511796,0.590603785761546,1.22974059177571,0,0,1.06949213515416,0,0,0,0.680879211507576,2.16073312837572,1.68166288917581,1.07168517515796,0.177340233642274,1.07021290561242,0.658196082408484,0.608929898229199,0.469343416127421,0.42366414172764,0,0.98931751764888,0,0.361877549568935,0.954978752025092,1.96969079694074,0,12.0526446306831,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,1.21991680276109,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.247960367176008,0,0,0,0,1.04661582230785,0.827292452285488,0.972255941720238,1.54991788173277,0.337912250981556,1.05621514781179,1.8228613878153,1.67774951081137,0.241584120826006,0.576060012515731,0,1.01362607645082,0.410843828659309,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,1.33191572024439,0.448569283047378,0.167884616364078,0,0,0.183151624267265,0,0,11.8597886949584,7.82552902062201,10.8850147553485,8.93636548187176,7.53590771747707,2.2661816921691,8.10027000278167,7.20513925158753,6.79713613476307,11.9084871702919,2.38710899443606,7.18244772121856,2.39027048055788,1.94485373654635,2.72497111416377,1.10306105070008,0.222246727801615,1.64828045791115,3.20919209591815,1.76888048234658,2.28131369901216,1.13175804831646,1.591905626988,1.40855335290712,1.83793500657962,0.952587382566147,1.50649623728312,2.89363830695558,2.06042950401653,0.735994600671987,1.02860775715625,1.77475806159337,0.476872379894642,1.0174249164263,1.50575008664529,1.4384483341585,2.0122077016005,0.789209134313529,1.7654534799962,2.24456908663095,2.25406534435931,1.18205378850676,2.45538625901814,1.85924209423159,1.35034627686799,4.24677982494508,1.16965804222704,1.71896843238639,0.57386499620653,1.98532277207564,0
|short_description=p1@Chrna4
}}
}}

Latest revision as of 07:52, 26 September 2015

Short description:p1@Chrna4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chrna4_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: -7bp_to_ENSMUST00000135766_5end
EntrezGene:Chrna4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chrna4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C320.03
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F220.36
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C67.35
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D55.50
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A312.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.94
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.31e-1733
neuronal stem cell2.31e-1733
neuroblast2.31e-1733
electrically signaling cell2.31e-1733
neural cell3.58e-1643
ectodermal cell1.69e-1544
neurectodermal cell1.69e-1544
CNS neuron (sensu Vertebrata)1.11e-1323
neuroblast (sensu Vertebrata)1.11e-1323
electrically responsive cell6.98e-1339
electrically active cell6.98e-1339

Uber anatomy
Ontology termp-valuen
central nervous system1.20e-2873
nervous system2.97e-2775
ectoderm-derived structure1.22e-2695
ectoderm1.22e-2695
presumptive ectoderm1.22e-2695
neurectoderm1.01e-2364
neural plate1.01e-2364
presumptive neural plate1.01e-2364
ecto-epithelium2.87e-1973
regional part of nervous system4.49e-1954
neural tube3.29e-1752
neural rod3.29e-1752
future spinal cord3.29e-1752
neural keel3.29e-1752
pre-chordal neural plate1.26e-1649
gray matter7.07e-1634
structure with developmental contribution from neural crest3.43e-1392
regional part of brain1.24e-1246
anterior neural tube2.16e-1240
brain4.19e-1247
future brain4.19e-1247
brain grey matter8.54e-1229
regional part of telencephalon8.54e-1229
telencephalon8.54e-1229
regional part of forebrain1.11e-1139
forebrain1.11e-1139
future forebrain1.11e-1139
occipital lobe2.62e-0810
visual cortex2.62e-0810
neocortex2.62e-0810
regional part of cerebral cortex7.86e-0817
basal ganglion2.45e-078
nuclear complex of neuraxis2.45e-078
aggregate regional part of brain2.45e-078
collection of basal ganglia2.45e-078
cerebral subcortex2.45e-078
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