FFCP PHASE1:Mm9::chr2:79096272..79096298,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:79096272..79096298,+ to FFCP PHASE1:Mm9::chr2:79096272..79096298,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16401 | |EntrezGene=16401 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=168bp_to_ENSMUST00000126312_5end | |||
|cluster_id=chr2:79096272..79096298,+ | |||
|description=CAGE_peak_9_at_Itga4_5end | |||
|id=chr2:79096272..79096298,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.05e-11!32;CL:0002032!1.05e-11!32;CL:0000037!1.05e-11!32;CL:0000566!1.05e-11!32;CL:0000837!1.05e-11!32;CL:0002031!1.58e-10!25;CL:0000838!7.77e-09!12;CL:0000084!1.94e-08!11;CL:0000827!1.94e-08!11;CL:0000542!9.35e-08!13;CL:0000051!9.35e-08!13;CL:0000738!4.53e-07!17;CL:0002087!4.53e-07!17;CL:0000791!9.01e-07!9;CL:0000789!9.01e-07!9;CL:0002420!9.01e-07!9;CL:0002419!9.01e-07!9;CL:0000790!9.01e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.64e-15,32;CL:0002032,6.64e-15,32;CL:0000037,6.64e-15,32;CL:0000837,6.64e-15,32;CL:0002031,2.27e-13,25;CL:0000084,9.14e-13,11;CL:0000827,9.14e-13,11;CL:0000838,1.42e-11,12;CL:0000542,1.45e-10,13;CL:0000051,1.45e-10,13;CL:0000738,1.01e-09,17;CL:0002087,1.01e-09,17;CL:0002320,3.47e-09,46;CL:0000134,3.47e-09,46;CL:0000791,9.20e-09,9;CL:0000789,9.20e-09,9;CL:0002420,9.20e-09,9;CL:0002419,9.20e-09,9;CL:0000790,9.20e-09,9;CL:0000219,2.82e-07,54;CL:0000624,5.96e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.47e-17!48;UBERON:0002405!3.50e-15!70;UBERON:0002390!3.97e-15!45;UBERON:0003061!3.97e-15!45;UBERON:0004177!7.06e-14!29;UBERON:0005057!2.83e-11!51;UBERON:0002370!1.19e-10!23;UBERON:0000974!1.19e-10!23;UBERON:0004807!1.19e-10!23;UBERON:0005058!1.19e-10!23;UBERON:0003351!1.19e-10!23;UBERON:0009113!1.19e-10!23;UBERON:0003295!1.19e-10!23;UBERON:0009722!1.19e-10!23;UBERON:0005562!1.19e-10!23;UBERON:0007690!1.19e-10!23;UBERON:0006562!7.78e-10!24;UBERON:0003408!7.78e-10!24;UBERON:0001557!7.78e-10!24;UBERON:0001042!7.78e-10!24;UBERON:0008814!7.78e-10!24;UBERON:0009145!7.78e-10!24;UBERON:0003081!3.62e-09!88;UBERON:0000065!4.96e-09!41;UBERON:0001004!1.52e-08!42;UBERON:0000072!8.44e-08!27;UBERON:0000077!2.69e-07!97;UBERON:0001041!2.94e-07!92;UBERON:0005911!5.59e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-17,48;UBERON:0002405,1.35e-17,48;UBERON:0002390,4.86e-17,45;UBERON:0003061,4.86e-17,45;UBERON:0004177,5.30e-16,29;UBERON:0005057,5.30e-16,29;UBERON:0002370,9.21e-16,23;UBERON:0000974,9.21e-16,23;UBERON:0004807,9.21e-16,23;UBERON:0005058,9.21e-16,23;UBERON:0003351,9.21e-16,23;UBERON:0009113,9.21e-16,23;UBERON:0003295,9.21e-16,23;UBERON:0009722,9.21e-16,23;UBERON:0005562,9.21e-16,23;UBERON:0007690,9.21e-16,23;UBERON:0006562,5.74e-15,24;UBERON:0003408,5.74e-15,24;UBERON:0001557,5.74e-15,24;UBERON:0001042,5.74e-15,24;UBERON:0008814,5.74e-15,24;UBERON:0009145,5.74e-15,24;UBERON:0000072,6.11e-13,27;UBERON:0000077,1.34e-12,35;UBERON:0000065,3.53e-11,41;UBERON:0001004,8.09e-11,42;UBERON:0003081,2.79e-09,87;UBERON:0002384,3.47e-09,46;UBERON:0007811,6.61e-09,36;UBERON:0000153,5.87e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,2.67498572088167,1.40438715793196,0.513653904676515,0.319088635981346,2.22560948910567,1.39872643870396,0.666219523631325,1.41732687172878,0.699561878128147,3.78554598429885,2.74228867211478,0.84877930359606,0.255129870453209,7.14894848646374,4.4403964153619,0.799962113967033,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,15.8481681015439,0,0,0,0.418531630736908,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,3.88406825470758,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0.485300549842228,1.54589062922275,2.90925151881133,0,0,0,0,1.31796636956512,1.19980546198682,0.508280908292259,0,0,0,0.173824320192276,0,0,0,0.611036183101898,1.8661045591514,0,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0.772043721344145,1.42081749697796,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0.246794327843601,0,0.500535317148282,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.179397413521912,0,1.10851914099963,0,0,0.169745085775188,0,0.167506257441816,0.714130922658041,0,0.315270288212382,1.10732344824387,0.478364305972461,0.491589944147214,0.863424909329478,1.01254341007058,1.50791283939272,0.54390568381871,0,0,0,0,0,0.504941854408746,0,0,0.430846795465598,0.955875191810208,0.222798674082394,0.566153061577665,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0.683483523191411,0.412773735926445,0.740778109478847,0.941842285023455,1.91371918809435,1.83022538565218,1.18984900995699,1.39951452323658,1.24379976423981,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0,0,0.288030006257865,0.948033361884535,1.82452693761148,1.54066435747241,0.909445760844565,1.43221356533985,0.596044064343795,1.44234539423963,1.47689527174577,1.9183625490148,1.06689529317,1.51239277705261,0.877120926657772,1.34696578296461,2.10378423926824,0,0,0,0,0,1.31377732815827,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0.628839487883947,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0,0.37456602987953,0.0640251524048693,0.402048282689293,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,2.32421982194837,2.67498572088167,1.40438715793196,0.513653904676515,0.319088635981346,2.22560948910567,1.39872643870396,0.666219523631325,1.41732687172878,0.699561878128147,3.78554598429885,2.74228867211478,0.84877930359606,0.255129870453209,7.14894848646374,4.4403964153619,0.799962113967033,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,15.8481681015439,0,0,0,0.418531630736908,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,3.88406825470758,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0.485300549842228,1.54589062922275,2.90925151881133,0,0,0,0,1.31796636956512,1.19980546198682,0.508280908292259,0,0,0,0.173824320192276,0,0,0,0.611036183101898,1.8661045591514,0,0,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0.772043721344145,1.42081749697796,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0.246794327843601,0,0.500535317148282,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.179397413521912,0,1.10851914099963,0,0,0.169745085775188,0,0.167506257441816,0.714130922658041,0,0.315270288212382,1.10732344824387,0.478364305972461,0.491589944147214,0.863424909329478,1.01254341007058,1.50791283939272,0.54390568381871,0,0,0,0,0,0.504941854408746,0,0,0.430846795465598,0.955875191810208,0.222798674082394,0.566153061577665,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0.683483523191411,0.412773735926445,0.740778109478847,0.941842285023455,1.91371918809435,1.83022538565218,1.18984900995699,1.39951452323658,1.24379976423981,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0,0,0.288030006257865,0.948033361884535,1.82452693761148,1.54066435747241,0.909445760844565,1.43221356533985,0.596044064343795,1.44234539423963,1.47689527174577,1.9183625490148,1.06689529317,1.51239277705261,0.877120926657772,1.34696578296461,2.10378423926824,0,0,0,0,0,1.31377732815827,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0.628839487883947,0.183843508450014,0,0.412070114477788,0.64183841918363,0.252697211763798,0,0,0.37456602987953,0.0640251524048693,0.402048282689293,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0.695603506861264 | ||
|short_description=p9@Itga4 | |||
}} | }} |
Latest revision as of 00:47, 27 September 2015
Short description: | p9@Itga4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Itga4_5end |
Coexpression cluster: | NA |
Association with transcript: | 168bp_to_ENSMUST00000126312_5end |
EntrezGene: | Itga4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.64e-15 | 32 |
hematopoietic oligopotent progenitor cell | 6.64e-15 | 32 |
hematopoietic stem cell | 6.64e-15 | 32 |
hematopoietic multipotent progenitor cell | 6.64e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 2.27e-13 | 25 |
T cell | 9.14e-13 | 11 |
pro-T cell | 9.14e-13 | 11 |
lymphoid lineage restricted progenitor cell | 1.42e-11 | 12 |
lymphocyte | 1.45e-10 | 13 |
common lymphoid progenitor | 1.45e-10 | 13 |
leukocyte | 1.01e-09 | 17 |
nongranular leukocyte | 1.01e-09 | 17 |
connective tissue cell | 3.47e-09 | 46 |
mesenchymal cell | 3.47e-09 | 46 |
mature alpha-beta T cell | 9.20e-09 | 9 |
alpha-beta T cell | 9.20e-09 | 9 |
immature T cell | 9.20e-09 | 9 |
mature T cell | 9.20e-09 | 9 |
immature alpha-beta T cell | 9.20e-09 | 9 |
motile cell | 2.82e-07 | 54 |
CD4-positive, alpha-beta T cell | 5.96e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.35e-17 | 48 |
immune system | 1.35e-17 | 48 |
hematopoietic system | 4.86e-17 | 45 |
blood island | 4.86e-17 | 45 |
hemopoietic organ | 5.30e-16 | 29 |
immune organ | 5.30e-16 | 29 |
thymus | 9.21e-16 | 23 |
neck | 9.21e-16 | 23 |
respiratory system epithelium | 9.21e-16 | 23 |
hemolymphoid system gland | 9.21e-16 | 23 |
pharyngeal epithelium | 9.21e-16 | 23 |
thymic region | 9.21e-16 | 23 |
pharyngeal gland | 9.21e-16 | 23 |
entire pharyngeal arch endoderm | 9.21e-16 | 23 |
thymus primordium | 9.21e-16 | 23 |
early pharyngeal endoderm | 9.21e-16 | 23 |
pharynx | 5.74e-15 | 24 |
gland of gut | 5.74e-15 | 24 |
upper respiratory tract | 5.74e-15 | 24 |
chordate pharynx | 5.74e-15 | 24 |
pharyngeal arch system | 5.74e-15 | 24 |
pharyngeal region of foregut | 5.74e-15 | 24 |
segment of respiratory tract | 6.11e-13 | 27 |
mixed endoderm/mesoderm-derived structure | 1.34e-12 | 35 |
respiratory tract | 3.53e-11 | 41 |
respiratory system | 8.09e-11 | 42 |
lateral plate mesoderm | 2.79e-09 | 87 |
connective tissue | 3.47e-09 | 46 |
craniocervical region | 6.61e-09 | 36 |
anterior region of body | 5.87e-07 | 43 |