FFCP PHASE1:Mm9::chr4:130469179..130469263,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:130469179..130469263,+ to FFCP PHASE1:Mm9::chr4:130469179..130469263,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16792 | |EntrezGene=16792 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=316 | |||
|TSSclassifier=NA | |||
|UniProt=Q61168,B1ASF7,Q544S4 | |UniProt=Q61168,B1ASF7,Q544S4 | ||
|association_with_transcript=0bp_to_ENSMUST00000116245,ENSMUST00000136082,ENSMUST00000139023,ENSMUST00000156170,ENSMUST00000156225,NM_010686,uc008uzu.1,uc008uzv.1,uc012dlx.1,uc012dly.1_5end | |||
|cluster_id=chr4:130469179..130469263,+ | |||
|description=CAGE_peak_1_at_Laptm5_5end | |||
|id=chr4:130469179..130469263,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.30e-10!32;CL:0002032!1.30e-10!32;CL:0000037!1.30e-10!32;CL:0000566!1.30e-10!32;CL:0000837!1.30e-10!32;CL:0000738!5.02e-09!17;CL:0002087!5.02e-09!17;CL:0002031!2.12e-08!25;CL:0000838!2.77e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.93e-11,32;CL:0002032,9.93e-11,32;CL:0000037,9.93e-11,32;CL:0000837,9.93e-11,32;CL:0000738,4.96e-09,17;CL:0002087,4.96e-09,17;CL:0002031,1.63e-08,25;CL:0000838,2.75e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.82e-19!48;UBERON:0002405!5.18e-18!70;UBERON:0002390!1.92e-17!45;UBERON:0003061!1.92e-17!45;UBERON:0002371!9.29e-10!16;UBERON:0003081!4.73e-09!88;UBERON:0004177!5.81e-09!29;UBERON:0001474!6.88e-09!22;UBERON:0004765!6.88e-09!22;UBERON:0001434!6.88e-09!22;UBERON:0005057!1.06e-08!51;UBERON:0001041!1.13e-07!92;UBERON:0000077!1.30e-07!97;UBERON:0000926!1.98e-07!193;UBERON:0004120!1.98e-07!193;UBERON:0006603!1.98e-07!193;UBERON:0003408!6.39e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.21e-19,48;UBERON:0002405,4.21e-19,48;UBERON:0002390,1.40e-17,45;UBERON:0003061,1.40e-17,45;UBERON:0002371,9.16e-10,16;UBERON:0004177,4.50e-09,29;UBERON:0005057,4.50e-09,29;UBERON:0001474,8.10e-09,22;UBERON:0004765,8.10e-09,22;UBERON:0001434,8.10e-09,22;UBERON:0003081,1.00e-08,87;UBERON:0000077,1.29e-07,35;UBERON:0001041,1.60e-07,80;UBERON:0003408,5.04e-07,24;UBERON:0002370,9.02e-07,23;UBERON:0000974,9.02e-07,23;UBERON:0004807,9.02e-07,23;UBERON:0005058,9.02e-07,23;UBERON:0003351,9.02e-07,23;UBERON:0009113,9.02e-07,23;UBERON:0003295,9.02e-07,23;UBERON:0009722,9.02e-07,23;UBERON:0005562,9.02e-07,23;UBERON:0007690,9.02e-07,23 | |||
|phase1_expression=13.2923543096979,0.348975407639361,0,0.30246421130683,0,0,0.467225281191051,1124.2767772058,441.091066501172,418.741437590046,142.45334956362,111.36193395749,1129.75361681603,1235.33770658285,173.883295667776,227.582200546164,115.427709891144,750.169029221889,707.921820706429,566.56018515037,81.9817317056313,598.227980985334,441.68884343394,235.188861506308,198.668437404169,0.57423196411502,0.430761996159075,0.861884930743556,17.4821545899864,24.4469225867133,18.8470934057009,0,0,0,0,0.831173226792462,0,1356.04248358758,761.801960910705,1040.76520301991,1340.57956122268,1288.90683011659,1202.12363410514,0,0,0,40.684349906098,0.436050312760893,0.659058548203415,1.74986909166855,5.45947044338914,2.87505128729943,937.401420044573,969.809183869167,1154.81829385351,13.6347501099052,28.0802771139982,31.455997628924,14.3644687210314,12.6957835025288,10.775133859605,0.338844532069132,0,3322.42975620293,4107.75087010321,3575.84641852372,1201.09684306828,958.624671777279,11.9243054154749,10.9354810048669,10.7265730289205,27.1368435183613,29.3755159465646,8.69684674426174,10.6388472830242,7.35375029288017,34.1359231098105,41.498384877686,36.7119614482422,10.0233578674947,10.7955419450843,10.4182674111352,39.6439858581961,34.3285192119325,39.421947926417,30.0521157183141,32.1759998605973,13.047961207771,24.3838342532853,6.87701196971748,6.37701875143691,44.7420416030321,0.679971333707751,1.07940638327563,13.6453047664011,4.48026887097336,119.939534792516,0,0,0,0.704217098883403,0,0,0,5.84525810730278,2.53359865475099,4.04419556011827,77.6450382089608,2128.2104656961,187.482421638874,31.921300124969,37.1447883540812,35.0535555829209,27.2807979400247,43.8605877616179,34.8096457983201,19.5284024510155,174.531423802333,666.996356170205,108.869090014606,212.891223795819,197.829103279171,44.7340226923493,14.6390398505774,15.7085030110091,82.7680858875836,607.34286612051,398.335413379623,643.991910806292,46.435098215495,64.5075849974263,8.67015029578764,60.1432147865277,43.4716277461562,56.1027720310812,42.6694521868203,59.4741884885847,261.876673134246,36.1393544560155,50.7164872686402,16.9156575851515,11.2652031172402,16.2055916824814,23.0578371288644,14.2196283226275,20.2419678050063,15.3670828277955,16.298312356558,14.4430555265004,16.2631228944325,18.6508191613786,30.0298153425778,35.0339534024253,65.1231551396451,65.644501514134,17.7140497468459,429.7544706357,442.895748144425,496.4336334441,15.1201813950916,11.7263029990548,17.4660199617184,26.7521551211288,27.1534639811417,20.0547246753592,16.509910077279,12.0723030629829,23.9368951852697,21.228220638839,35.1318373129264,41.9936433447533,41.6669964162197,102.969004071503,70.7267826867159,60.3532152379045,24.6971069710283,96.482284631269,34.3785736662608,25.5945900642281,19.5078804362768,33.8921423277105,28.235693447268,29.5762798313678,33.2894845696978,48.4019642775402,30.469306623942,38.7056221552415,50.7339003704935,49.5208781282565,49.4350674759822,40.6339533764425,34.2522989997512,17.6391147886366,13.481324487948,15.7790829942313,8.5533557695032,12.2190066915604,15.2896087360894,15.3664785211945,20.3702004211851,25.4337939103027,14.9310568345379,58.9940727903426,70.90916992934,68.2059713042814,91.9686039654052,107.718724457295,126.859186029771,125.53054492824,172.329986333036,183.374941482565,101.862284292778,136.579796200987,176.394809194871,113.5817130137,53.0415643688935,48.2579042373944,63.2001012986011,353.987112359215,18.5701583535075,29.6596257124487,20.1996652072474,20.6527418493882,44.8916769944066,77.3641832879545,81.1755975088443,116.965276926794,106.524515721061,106.515785463201,169.106940786642,231.052505736568,223.048848332691,2168.37866304673,1836.22558857196,101.303440241921,111.478445507112,48.8073793562888,38.9142799486115,0,49.4843017320571,1.26203287766503,2.34263246577983,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,0,0,47.8768761468492,81.7574890799627,42.0234824654722,40.2330789603333,131.811128255056,65.0451177865818,27.4342118855129,29.3253850255809,23.5756349694873,45.476491503639,42.7334855642059,49.101375701962,65.0725375764735,44.2056749197054,61.9432045554199,48.4925599444994,45.3796390292022,29.2778060948258,15.665315180724,27.8121170132922,22.9340627483804,26.9557155136256,29.6092237219437,28.4669805641669,52.6724361968257,97.8581022625672,12.2862601101016,24.9197089802107,59.8537098177573,87.6751836958767,47.225020218746,38.7960118010194,26.754966658445,63.5428223853075,72.1304424820883,535.680211301268,201.846356868032,245.197554237498,210.972671845254,315.763666035568,327.61034403174,905.475096577267,1008.07031108731,954.409019093351,51.5522133728161,21.1945115699361,37.614101418467,24.6252177073707,28.0178316659388,29.0422209782416,31.558257054048,57.7747655520098,39.2633912976044,40.9583315602065,115.569112234168,2.81846469342095,10.9147078612105,10.092967917883,18.0839605159964,18.8573342277487,15.5439635451516,25.1144490701913,18.7494314175288,10.6956531314225,8.21386010808421,1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| |phase1_expression=13.2923543096979,0.348975407639361,0,0.30246421130683,0,0,0.467225281191051,1124.2767772058,441.091066501172,418.741437590046,142.45334956362,111.36193395749,1129.75361681603,1235.33770658285,173.883295667776,227.582200546164,115.427709891144,750.169029221889,707.921820706429,566.56018515037,81.9817317056313,598.227980985334,441.68884343394,235.188861506308,198.668437404169,0.57423196411502,0.430761996159075,0.861884930743556,17.4821545899864,24.4469225867133,18.8470934057009,0,0,0,0,0.831173226792462,0,1356.04248358758,761.801960910705,1040.76520301991,1340.57956122268,1288.90683011659,1202.12363410514,0,0,0,40.684349906098,0.436050312760893,0.659058548203415,1.74986909166855,5.45947044338914,2.87505128729943,937.401420044573,969.809183869167,1154.81829385351,13.6347501099052,28.0802771139982,31.455997628924,14.3644687210314,12.6957835025288,10.775133859605,0.338844532069132,0,3322.42975620293,4107.75087010321,3575.84641852372,1201.09684306828,958.624671777279,11.9243054154749,10.9354810048669,10.7265730289205,27.1368435183613,29.3755159465646,8.69684674426174,10.6388472830242,7.35375029288017,34.1359231098105,41.498384877686,36.7119614482422,10.0233578674947,10.7955419450843,10.4182674111352,39.6439858581961,34.3285192119325,39.421947926417,30.0521157183141,32.1759998605973,13.047961207771,24.3838342532853,6.87701196971748,6.37701875143691,44.7420416030321,0.679971333707751,1.07940638327563,13.6453047664011,4.48026887097336,119.939534792516,0,0,0,0.704217098883403,0,0,0,5.84525810730278,2.53359865475099,4.04419556011827,77.6450382089608,2128.2104656961,187.482421638874,31.921300124969,37.1447883540812,35.0535555829209,27.2807979400247,43.8605877616179,34.8096457983201,19.5284024510155,174.531423802333,666.996356170205,108.869090014606,212.891223795819,197.829103279171,44.7340226923493,14.6390398505774,15.7085030110091,82.7680858875836,607.34286612051,398.335413379623,643.991910806292,46.435098215495,64.5075849974263,8.67015029578764,60.1432147865277,43.4716277461562,56.1027720310812,42.6694521868203,59.4741884885847,261.876673134246,36.1393544560155,50.7164872686402,16.9156575851515,11.2652031172402,16.2055916824814,23.0578371288644,14.2196283226275,20.2419678050063,15.3670828277955,16.298312356558,14.4430555265004,16.2631228944325,18.6508191613786,30.0298153425778,35.0339534024253,65.1231551396451,65.644501514134,17.7140497468459,429.7544706357,442.895748144425,496.4336334441,15.1201813950916,11.7263029990548,17.4660199617184,26.7521551211288,27.1534639811417,20.0547246753592,16.509910077279,12.0723030629829,23.9368951852697,21.228220638839,35.1318373129264,41.9936433447533,41.6669964162197,102.969004071503,70.7267826867159,60.3532152379045,24.6971069710283,96.482284631269,34.3785736662608,25.5945900642281,19.5078804362768,33.8921423277105,28.235693447268,29.5762798313678,33.2894845696978,48.4019642775402,30.469306623942,38.7056221552415,50.7339003704935,49.5208781282565,49.4350674759822,40.6339533764425,34.2522989997512,17.6391147886366,13.481324487948,15.7790829942313,8.5533557695032,12.2190066915604,15.2896087360894,15.3664785211945,20.3702004211851,25.4337939103027,14.9310568345379,58.9940727903426,70.90916992934,68.2059713042814,91.9686039654052,107.718724457295,126.859186029771,125.53054492824,172.329986333036,183.374941482565,101.862284292778,136.579796200987,176.394809194871,113.5817130137,53.0415643688935,48.2579042373944,63.2001012986011,353.987112359215,18.5701583535075,29.6596257124487,20.1996652072474,20.6527418493882,44.8916769944066,77.3641832879545,81.1755975088443,116.965276926794,106.524515721061,106.515785463201,169.106940786642,231.052505736568,223.048848332691,2168.37866304673,1836.22558857196,101.303440241921,111.478445507112,48.8073793562888,38.9142799486115,0,49.4843017320571,1.26203287766503,2.34263246577983,0.215423397732799,0.477937595905104,0.445597348164788,0.849229592366497,0,0,0,47.8768761468492,81.7574890799627,42.0234824654722,40.2330789603333,131.811128255056,65.0451177865818,27.4342118855129,29.3253850255809,23.5756349694873,45.476491503639,42.7334855642059,49.101375701962,65.0725375764735,44.2056749197054,61.9432045554199,48.4925599444994,45.3796390292022,29.2778060948258,15.665315180724,27.8121170132922,22.9340627483804,26.9557155136256,29.6092237219437,28.4669805641669,52.6724361968257,97.8581022625672,12.2862601101016,24.9197089802107,59.8537098177573,87.6751836958767,47.225020218746,38.7960118010194,26.754966658445,63.5428223853075,72.1304424820883,535.680211301268,201.846356868032,245.197554237498,210.972671845254,315.763666035568,327.61034403174,905.475096577267,1008.07031108731,954.409019093351,51.5522133728161,21.1945115699361,37.614101418467,24.6252177073707,28.0178316659388,29.0422209782416,31.558257054048,57.7747655520098,39.2633912976044,40.9583315602065,115.569112234168,2.81846469342095,10.9147078612105,10.092967917883,18.0839605159964,18.8573342277487,15.5439635451516,25.1144490701913,18.7494314175288,10.6956531314225,8.21386010808421,14.977560325409,813.728635617559,158.733843572199,166.802594435679,212.68038721465,335.854081072195,554.320979839729,456.021535478762,501.258255230515,505.639981340323,432.245007347159,593.059620974896,686.883143453775,635.767849559297,685.36615439272,37.1837829128947,63.9319545717306,5.02397597013064,6.54750003819906,78.0485959890049,234.790776789429,118.682252525188,54.2351999070037,57.1792198600314,45.7448992519824,31.7624413189952,37.2382083735608,35.5736087451433,27.4033007908257,33.9927253825365,39.8263275136765,29.2708782095743,29.4542565839733,34.1721805756201,2.59468368960442,26.7346665178691,24.0734384113329,52.5110508867515,20.5420899375423,24.4511866238519,34.2259960814487,36.2621700740454,39.1521435702015,38.4099761880972,30.1640366869385,36.0276312047406,39.2357916298807,38.9913178145654,42.617117965065,38.1034953026459,32.3317269386147,36.8456611085677,34.2031297666745,33.2669559503738,36.0012715004686,37.9798225180982,31.7120132629937,32.5575973256416,35.6674551774103,35.5381353145041,26.1587001208065,35.2513413326709,31.2349461845482,50.5028044491965,32.9805350385204,31.5214343601803,39.2861801442902,31.6071156019371,61.5372089029841,66.9492348873695,71.3491405758496,89.8161005921887,79.9585228047765,101.692644214097,94.8339447687524 | ||
|short_description=p1@Laptm5 | |||
}} | }} |
Latest revision as of 10:16, 26 September 2015
Short description: | p1@Laptm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Laptm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 0bp_to_ENSMUST00000116245, ENSMUST00000136082, ENSMUST00000139023, ENSMUST00000156170, ENSMUST00000156225, NM_010686, uc008uzu.1, uc008uzv.1, uc012dlx.1, uc012dly.1_5end |
EntrezGene: | Laptm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.93e-11 | 32 |
hematopoietic oligopotent progenitor cell | 9.93e-11 | 32 |
hematopoietic stem cell | 9.93e-11 | 32 |
hematopoietic multipotent progenitor cell | 9.93e-11 | 32 |
leukocyte | 4.96e-09 | 17 |
nongranular leukocyte | 4.96e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 1.63e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.75e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.21e-19 | 48 |
immune system | 4.21e-19 | 48 |
hematopoietic system | 1.40e-17 | 45 |
blood island | 1.40e-17 | 45 |
bone marrow | 9.16e-10 | 16 |
hemopoietic organ | 4.50e-09 | 29 |
immune organ | 4.50e-09 | 29 |
bone element | 8.10e-09 | 22 |
skeletal element | 8.10e-09 | 22 |
skeletal system | 8.10e-09 | 22 |
lateral plate mesoderm | 1.00e-08 | 87 |
mixed endoderm/mesoderm-derived structure | 1.29e-07 | 35 |
foregut | 1.60e-07 | 80 |
gland of gut | 5.04e-07 | 24 |
thymus | 9.02e-07 | 23 |
neck | 9.02e-07 | 23 |
respiratory system epithelium | 9.02e-07 | 23 |
hemolymphoid system gland | 9.02e-07 | 23 |
pharyngeal epithelium | 9.02e-07 | 23 |
thymic region | 9.02e-07 | 23 |
pharyngeal gland | 9.02e-07 | 23 |
entire pharyngeal arch endoderm | 9.02e-07 | 23 |
thymus primordium | 9.02e-07 | 23 |
early pharyngeal endoderm | 9.02e-07 | 23 |