FFCP PHASE1:Mm9::chr4:134676555..134676575,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:134676555..134676575,+ to FFCP PHASE1:Mm9::chr4:134676555..134676575,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12399 | |EntrezGene=12399 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=187 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U1Q3 | |UniProt=Q3U1Q3 | ||
|association_with_transcript=0bp_to_ENSMUST00000056977,NM_019732,uc008vgb.1_5end | |||
|cluster_id=chr4:134676555..134676575,+ | |||
|description=CAGE_peak_2_at_Runx3_5end | |||
|id=chr4:134676555..134676575,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.87e-15!48;UBERON:0002390!2.49e-13!45;UBERON:0003061!2.49e-13!45;UBERON:0004177!5.44e-11!29;UBERON:0002405!6.71e-10!70;UBERON:0002370!3.78e-08!23;UBERON:0000974!3.78e-08!23;UBERON:0004807!3.78e-08!23;UBERON:0005058!3.78e-08!23;UBERON:0003351!3.78e-08!23;UBERON:0009113!3.78e-08!23;UBERON:0003295!3.78e-08!23;UBERON:0009722!3.78e-08!23;UBERON:0005562!3.78e-08!23;UBERON:0007690!3.78e-08!23;UBERON:0003081!8.82e-08!88;UBERON:0006562!1.73e-07!24;UBERON:0003408!1.73e-07!24;UBERON:0001557!1.73e-07!24;UBERON:0001042!1.73e-07!24;UBERON:0008814!1.73e-07!24;UBERON:0009145!1.73e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.82e-22,48;UBERON:0002405,7.82e-22,48;UBERON:0002390,2.28e-18,45;UBERON:0003061,2.28e-18,45;UBERON:0004177,3.92e-17,29;UBERON:0005057,3.92e-17,29;UBERON:0000077,1.02e-14,35;UBERON:0002370,2.82e-12,23;UBERON:0000974,2.82e-12,23;UBERON:0004807,2.82e-12,23;UBERON:0005058,2.82e-12,23;UBERON:0003351,2.82e-12,23;UBERON:0009113,2.82e-12,23;UBERON:0003295,2.82e-12,23;UBERON:0009722,2.82e-12,23;UBERON:0005562,2.82e-12,23;UBERON:0007690,2.82e-12,23;UBERON:0006562,1.45e-11,24;UBERON:0003408,1.45e-11,24;UBERON:0001557,1.45e-11,24;UBERON:0001042,1.45e-11,24;UBERON:0008814,1.45e-11,24;UBERON:0009145,1.45e-11,24;UBERON:0003081,5.22e-11,87;UBERON:0000072,9.32e-10,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0,0,0.171200729931206,0.174840804837995,0.999329285446988,1.61980213911861,0.699561878128147,2.68142840554502,2.60517423850904,1.27316895539409,0.595303031057488,36.9362338467293,26.3811787030325,7.1996590257033,5.73523202667925,0,0,0,1.14014051673824,1.76421090831952,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.8661032344956,0,0,0,0,0,0,0,0,1.3498495759221,3.9554654502679,2.8419204597844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,6.81721290312231,3.89679006904303,4.24007489412408,0,5.13305909657271,7.64415719119937,0,0,0,0,0.79928715803342,31.5904218049549,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,1.29413479957927,1.54589062922275,1.45462575940567,0,0,0,2.04365644166873,9.34557971146178,2.99951365496704,4.82866862877646,0,0,0,0,0,0,0,0,1.49288364732112,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.39300866608867,0.823128545631774,0,0.702213187313235,1.28673953557358,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,1.05780226665418,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.949058123089023,0.164698954724011,0,0.596869416123452,0.19496408711912,0.898819408654221,0.648414149624083,1.99141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,2.58654466233247,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.797273843287435,1.14704320301017,0.863424909329478,0.578596234326046,0,0,1.47529281905711,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,1.64970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0.614870295887855,0.775284879504663,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,7.27482294997502,0,0.441056796109924,2.80306630000516,0.968786560175433,1.74907482291652,1.3130957840345,1.31312719796049,0,0,2.56306321196779,1.23832120777933,1.66675074632741,1.31857919903284,1.91371918809435,1.60144721244566,7.13909405974192,6.9975726161829,7.32459861163446,0,0,0.406638934253697,0.108005340821801,0,0,0,0.165306911450672,0,0.518459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,1.58005560314089,4.25722952109345,6.26536838705446,4.67714962720062,2.68540043501222,2.98022032171897,5.64918612743854,5.46451250545936,4.2405908978222,2.89585865288999,2.92395936896837,6.62713589030316,4.71438024037614,8.99952146798081,0,0,0,0,0.386379188064381,7.88266396894964,0.73260649706906,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0,0.320919209591815,0,0.760437899670719,0.377252682772152,0.280924522409647,0.128050304809739,0.402048282689293,0.476293691283074,0.347652977834566,0,0.412085900803307,0,0.342869252385415,1.06485483695602,0.238436189947321,0.436039249896986,0.0941093804153306,0.507687647350059,0.365855945745545,0.526139422875686,0.407412341537585,2.24456908663095,0,0.197008964751127,1.63692417267876,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0,0.57386499620653,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0,0,0.171200729931206,0.174840804837995,0.999329285446988,1.61980213911861,0.699561878128147,2.68142840554502,2.60517423850904,1.27316895539409,0.595303031057488,36.9362338467293,26.3811787030325,7.1996590257033,5.73523202667925,0,0,0,1.14014051673824,1.76421090831952,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.8661032344956,0,0,0,0,0,0,0,0,1.3498495759221,3.9554654502679,2.8419204597844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,6.81721290312231,3.89679006904303,4.24007489412408,0,5.13305909657271,7.64415719119937,0,0,0,0,0.79928715803342,31.5904218049549,0.445326417194474,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,1.29413479957927,1.54589062922275,1.45462575940567,0,0,0,2.04365644166873,9.34557971146178,2.99951365496704,4.82866862877646,0,0,0,0,0,0,0,0,1.49288364732112,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.39300866608867,0.823128545631774,0,0.702213187313235,1.28673953557358,0.284163499395593,0,0,0.540186184383045,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,1.05780226665418,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.949058123089023,0.164698954724011,0,0.596869416123452,0.19496408711912,0.898819408654221,0.648414149624083,1.99141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,2.58654466233247,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.797273843287435,1.14704320301017,0.863424909329478,0.578596234326046,0,0,1.47529281905711,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,1.64970122972535,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0.614870295887855,0.775284879504663,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,7.27482294997502,0,0.441056796109924,2.80306630000516,0.968786560175433,1.74907482291652,1.3130957840345,1.31312719796049,0,0,2.56306321196779,1.23832120777933,1.66675074632741,1.31857919903284,1.91371918809435,1.60144721244566,7.13909405974192,6.9975726161829,7.32459861163446,0,0,0.406638934253697,0.108005340821801,0,0,0,0.165306911450672,0,0.518459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,1.58005560314089,4.25722952109345,6.26536838705446,4.67714962720062,2.68540043501222,2.98022032171897,5.64918612743854,5.46451250545936,4.2405908978222,2.89585865288999,2.92395936896837,6.62713589030316,4.71438024037614,8.99952146798081,0,0,0,0,0.386379188064381,7.88266396894964,0.73260649706906,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0,0.320919209591815,0,0.760437899670719,0.377252682772152,0.280924522409647,0.128050304809739,0.402048282689293,0.476293691283074,0.347652977834566,0,0.412085900803307,0,0.342869252385415,1.06485483695602,0.238436189947321,0.436039249896986,0.0941093804153306,0.507687647350059,0.365855945745545,0.526139422875686,0.407412341537585,2.24456908663095,0,0.197008964751127,1.63692417267876,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0,0.57386499620653,0.441182838239031,0.231867835620421 | ||
|short_description=p2@Runx3 | |||
}} | }} |
Latest revision as of 12:28, 26 September 2015
Short description: | p2@Runx3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Runx3_5end |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | 0bp_to_ENSMUST00000056977, NM_019732, uc008vgb.1_5end |
EntrezGene: | Runx3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.82e-22 | 48 |
immune system | 7.82e-22 | 48 |
hematopoietic system | 2.28e-18 | 45 |
blood island | 2.28e-18 | 45 |
hemopoietic organ | 3.92e-17 | 29 |
immune organ | 3.92e-17 | 29 |
mixed endoderm/mesoderm-derived structure | 1.02e-14 | 35 |
thymus | 2.82e-12 | 23 |
neck | 2.82e-12 | 23 |
respiratory system epithelium | 2.82e-12 | 23 |
hemolymphoid system gland | 2.82e-12 | 23 |
pharyngeal epithelium | 2.82e-12 | 23 |
thymic region | 2.82e-12 | 23 |
pharyngeal gland | 2.82e-12 | 23 |
entire pharyngeal arch endoderm | 2.82e-12 | 23 |
thymus primordium | 2.82e-12 | 23 |
early pharyngeal endoderm | 2.82e-12 | 23 |
pharynx | 1.45e-11 | 24 |
gland of gut | 1.45e-11 | 24 |
upper respiratory tract | 1.45e-11 | 24 |
chordate pharynx | 1.45e-11 | 24 |
pharyngeal arch system | 1.45e-11 | 24 |
pharyngeal region of foregut | 1.45e-11 | 24 |
lateral plate mesoderm | 5.22e-11 | 87 |
segment of respiratory tract | 9.32e-10 | 27 |