FFCP PHASE1:Mm9::chr6:138371034..138371043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109593 | |EntrezGene=109593 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BZL8 | |UniProt=Q8BZL8 | ||
|association_with_transcript=347bp_to_uc009enl.1_5end | |||
|cluster_id=chr6:138371034..138371043,- | |||
|description=CAGE_peak_18_at_Lmo3_5end | |||
|id=chr6:138371034..138371043,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.13e-08,3;CL:0002613,1.34e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.17e-23!50;UBERON:0006238!1.17e-23!50;UBERON:0003080!1.61e-23!40;UBERON:0001049!5.65e-23!52;UBERON:0005068!5.65e-23!52;UBERON:0006241!5.65e-23!52;UBERON:0007135!5.65e-23!52;UBERON:0002616!1.83e-22!49;UBERON:0002780!4.09e-22!39;UBERON:0001890!4.09e-22!39;UBERON:0006240!4.09e-22!39;UBERON:0002020!3.53e-20!34;UBERON:0002791!6.62e-20!29;UBERON:0003528!6.62e-20!29;UBERON:0001893!6.62e-20!29;UBERON:0003056!2.11e-19!49;UBERON:0001017!9.09e-19!73;UBERON:0005743!9.09e-19!73;UBERON:0000033!2.06e-18!63;UBERON:0000073!5.19e-18!75;UBERON:0001016!5.19e-18!75;UBERON:0002346!7.15e-17!71;UBERON:0003075!7.15e-17!71;UBERON:0007284!7.15e-17!71;UBERON:0002619!3.70e-15!17;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0004121!2.09e-13!102;UBERON:0000924!2.09e-13!102;UBERON:0006601!2.09e-13!102;UBERON:0007811!3.50e-11!86;UBERON:0002021!6.55e-11!10;UBERON:0000411!6.55e-11!10;UBERON:0001950!6.55e-11!10;UBERON:0000153!1.58e-09!94;UBERON:0002420!1.27e-07!8;UBERON:0007245!1.27e-07!8;UBERON:0010009!1.27e-07!8;UBERON:0010011!1.27e-07!8;UBERON:0000454!1.27e-07!8;UBERON:0000025!2.46e-07!114;UBERON:0002950!3.16e-07!4;UBERON:0001891!3.16e-07!4;UBERON:0009616!3.16e-07!4;UBERON:0002298!6.03e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002619,2.19e-12,17;UBERON:0002020,4.50e-11,34;UBERON:0000956,3.37e-10,21;UBERON:0001869,3.37e-10,21;UBERON:0000203,3.37e-10,21;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0.122490799214954,2.87536413054709,0.919218786610021,0,0.127687338085188,0.153606533256243,0,2.01272815925301,0,0.837548997004143,0.56276261003168,0.15279824777681,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0.599162557619291,0.915001205637253,0.502617408451458,0.347648640384553,0.511430914660661,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0.122490799214954,2.87536413054709,0.919218786610021,0,0.127687338085188,0.153606533256243,0,2.01272815925301,0,0.837548997004143,0.56276261003168,0.15279824777681,0,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0.599162557619291,0.915001205637253,0.502617408451458,0.347648640384553,0.511430914660661,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.17230640686684,0.476293691283074,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p18@Lmo3 | |||
}} | }} |
Latest revision as of 20:57, 26 September 2015
Short description: | p18@Lmo3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Lmo3_5end |
Coexpression cluster: | NA |
Association with transcript: | 347bp_to_uc009enl.1_5end |
EntrezGene: | Lmo3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.13e-08 | 3 |
striatum neuron | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
regional part of cerebral cortex | 2.19e-12 | 17 |
gray matter | 4.50e-11 | 34 |
cerebral cortex | 3.37e-10 | 21 |
cerebral hemisphere | 3.37e-10 | 21 |
pallium | 3.37e-10 | 21 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
occipital lobe | 1.14e-09 | 10 |
visual cortex | 1.14e-09 | 10 |
neocortex | 1.14e-09 | 10 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |