FFCP PHASE1:Mm9::chr6:144158267..144158282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20678 | |EntrezGene=20678 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TBA9,B2KFM4,P35710,Q8C4K8,B2KFM9 | |UniProt=Q2TBA9,B2KFM4,P35710,Q8C4K8,B2KFM9 | ||
|association_with_transcript=-179bp_to_ENSMUST00000150087,NM_001113559,NM_001243163,NM_011444_5end | |||
|cluster_id=chr6:144158267..144158282,- | |||
|description=CAGE_peak_16_at_Sox5_5end | |||
|id=chr6:144158267..144158282,- | |||
|ontology_enrichment_celltype=CL:0002609!1.16e-08!6;CL:0000540!4.59e-07!33;CL:0000047!4.59e-07!33;CL:0000031!4.59e-07!33;CL:0000404!4.59e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.65e-53,6;CL:0002608,4.66e-27,3;CL:0000117,6.67e-14,23;CL:0000337,6.67e-14,23;CL:0000540,1.18e-09,33;CL:0000047,1.18e-09,33;CL:0000031,1.18e-09,33;CL:0000404,1.18e-09,33;CL:0000393,3.82e-08,39;CL:0000211,3.82e-08,39;CL:0000182,7.62e-08,5;CL:0002321,1.07e-07,70;CL:0002319,2.28e-07,43;CL:0000221,3.39e-07,44;CL:0000133,3.39e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.79e-07!21;UBERON:0001869!1.79e-07!21;UBERON:0000203!1.79e-07!21;UBERON:0002791!2.85e-07!29;UBERON:0003528!2.85e-07!29;UBERON:0001893!2.85e-07!29;UBERON:0002020!4.79e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.12e-15,21;UBERON:0001869,3.12e-15,21;UBERON:0000203,3.12e-15,21;UBERON:0001954,5.26e-12,7;UBERON:0003022,5.26e-12,7;UBERON:0002421,5.26e-12,7;UBERON:0000349,5.26e-12,7;UBERON:0002600,5.26e-12,7;UBERON:0003528,5.25e-11,29;UBERON:0002791,5.25e-11,29;UBERON:0001893,5.25e-11,29;UBERON:0002020,2.29e-09,34;UBERON:0002780,3.82e-08,39;UBERON:0001890,3.82e-08,39;UBERON:0006240,3.82e-08,39;UBERON:0003080,6.18e-08,40;UBERON:0002616,7.13e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,5.49554945234932,7.69533848490637,5.04779907243317,0,0.220868540951614,2.20483438586917,1.43768206527355,7.35375029288017,0,0,0,0,0.457438218012048,0.52091337055676,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,0,1.61910957491345,1.29955283489534,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0.431135985865684,1.13463648100692,1.58356011747554,0.219195732427575,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.252697211763798,0,0.377252682772152,0.468207537349412,0.320125762024346,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.872078499793971,0.846984423737976,0.338458431566706,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,5.49554945234932,7.69533848490637,5.04779907243317,0,0.220868540951614,2.20483438586917,1.43768206527355,7.35375029288017,0,0,0,0,0.457438218012048,0.52091337055676,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,0,1.61910957491345,1.29955283489534,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0.431135985865684,1.13463648100692,1.58356011747554,0.219195732427575,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.252697211763798,0,0.377252682772152,0.468207537349412,0.320125762024346,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.872078499793971,0.846984423737976,0.338458431566706,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p16@Sox5 | |||
}} | }} |
Latest revision as of 21:47, 26 September 2015
Short description: | p16@Sox5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Sox5_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -179bp_to_ENSMUST00000150087, NM_001113559, NM_001243163, NM_011444_5end |
EntrezGene: | Sox5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.65e-53 | 6 |
hippocampal neuron | 4.66e-27 | 3 |
CNS neuron (sensu Vertebrata) | 6.67e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.67e-14 | 23 |
neuron | 1.18e-09 | 33 |
neuronal stem cell | 1.18e-09 | 33 |
neuroblast | 1.18e-09 | 33 |
electrically signaling cell | 1.18e-09 | 33 |
electrically responsive cell | 3.82e-08 | 39 |
electrically active cell | 3.82e-08 | 39 |
hepatocyte | 7.62e-08 | 5 |
embryonic cell | 1.07e-07 | 70 |
neural cell | 2.28e-07 | 43 |
ectodermal cell | 3.39e-07 | 44 |
neurectodermal cell | 3.39e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.12e-15 | 21 |
cerebral hemisphere | 3.12e-15 | 21 |
pallium | 3.12e-15 | 21 |
Ammon's horn | 5.26e-12 | 7 |
lobe parts of cerebral cortex | 5.26e-12 | 7 |
hippocampal formation | 5.26e-12 | 7 |
limbic system | 5.26e-12 | 7 |
limbic lobe | 5.26e-12 | 7 |
brain grey matter | 5.25e-11 | 29 |
regional part of telencephalon | 5.25e-11 | 29 |
telencephalon | 5.25e-11 | 29 |
gray matter | 2.29e-09 | 34 |
regional part of forebrain | 3.82e-08 | 39 |
forebrain | 3.82e-08 | 39 |
future forebrain | 3.82e-08 | 39 |
anterior neural tube | 6.18e-08 | 40 |
regional part of brain | 7.13e-07 | 46 |