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FFCP PHASE1:Mm9::chr6:83129562..83129624,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:83129562..83129624,+
|DHSsupport=NA
|short_description=p3@Dctn1
|DPIdataset=NA
|description=CAGE_peak_3_at_Dctn1_5end
|association_with_transcript=0bp_to_ENSMUST00000113918,ENSMUST00000113919,ENSMUST00000141680,NM_007835,uc009cnc.1_5end
|EntrezGene=13191
|EntrezGene=13191
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q3M2,O08788,D3Z2M9,Q3TRF1
|UniProt=E9Q3M2,O08788,D3Z2M9,Q3TRF1
|association_with_transcript=0bp_to_ENSMUST00000113918,ENSMUST00000113919,ENSMUST00000141680,NM_007835,uc009cnc.1_5end
|cluster_id=chr6:83129562..83129624,+
|description=CAGE_peak_3_at_Dctn1_5end
|id=chr6:83129562..83129624,+
|ontology_enrichment_celltype=CL:0000221!2.19e-16!44;CL:0000133!2.19e-16!44;CL:0002319!6.91e-16!43;CL:0000055!2.90e-14!50;CL:0000540!1.21e-13!33;CL:0000047!1.21e-13!33;CL:0000031!1.21e-13!33;CL:0000404!1.21e-13!33;CL:0000117!2.95e-13!23;CL:0000337!2.95e-13!23;CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.43e-17,44;CL:0000133,3.43e-17,44;CL:0002319,1.36e-16,43;CL:0000117,4.17e-16,23;CL:0000337,4.17e-16,23;CL:0000540,1.57e-14,33;CL:0000047,1.57e-14,33;CL:0000031,1.57e-14,33;CL:0000404,1.57e-14,33;CL:0000393,9.26e-13,39;CL:0000211,9.26e-13,39;CL:0002321,1.20e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.22e-35!73;UBERON:0005743!1.22e-35!73;UBERON:0000073!7.22e-35!75;UBERON:0001016!7.22e-35!75;UBERON:0004121!1.62e-31!102;UBERON:0000924!1.62e-31!102;UBERON:0006601!1.62e-31!102;UBERON:0002346!4.38e-31!71;UBERON:0003075!4.38e-31!71;UBERON:0007284!4.38e-31!71;UBERON:0000033!7.31e-29!63;UBERON:0001049!7.50e-28!52;UBERON:0005068!7.50e-28!52;UBERON:0006241!7.50e-28!52;UBERON:0007135!7.50e-28!52;UBERON:0000955!9.21e-27!50;UBERON:0006238!9.21e-27!50;UBERON:0002616!4.51e-26!49;UBERON:0003056!4.25e-22!49;UBERON:0003080!4.02e-20!40;UBERON:0002020!1.20e-19!34;UBERON:0002780!2.34e-19!39;UBERON:0001890!2.34e-19!39;UBERON:0006240!2.34e-19!39;UBERON:0002791!1.38e-16!29;UBERON:0003528!1.38e-16!29;UBERON:0001893!1.38e-16!29;UBERON:0007811!2.24e-13!86;UBERON:0000956!9.31e-12!21;UBERON:0001869!9.31e-12!21;UBERON:0000203!9.31e-12!21;UBERON:0000153!5.62e-11!94;UBERON:0002619!3.30e-10!17;UBERON:0003076!3.40e-08!12;UBERON:0003057!3.40e-08!12;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-40,73;UBERON:0001016,1.13e-38,75;UBERON:0002346,2.15e-35,64;UBERON:0003075,2.15e-35,64;UBERON:0007284,2.15e-35,64;UBERON:0000073,2.97e-35,54;UBERON:0004121,5.00e-35,95;UBERON:0000924,5.00e-35,95;UBERON:0006601,5.00e-35,95;UBERON:0001049,2.66e-33,52;UBERON:0005068,2.66e-33,52;UBERON:0006241,2.66e-33,52;UBERON:0007135,2.66e-33,52;UBERON:0010371,8.62e-31,73;UBERON:0000955,4.93e-29,47;UBERON:0006238,4.93e-29,47;UBERON:0002616,3.38e-28,46;UBERON:0003056,3.19e-26,49;UBERON:0010314,1.55e-24,92;UBERON:0002020,4.58e-24,34;UBERON:0003080,9.96e-24,40;UBERON:0002780,8.75e-23,39;UBERON:0001890,8.75e-23,39;UBERON:0006240,8.75e-23,39;UBERON:0003528,3.00e-20,29;UBERON:0002791,3.00e-20,29;UBERON:0001893,3.00e-20,29;UBERON:0000956,3.06e-14,21;UBERON:0001869,3.06e-14,21;UBERON:0000203,3.06e-14,21;UBERON:0002619,2.59e-12,17;UBERON:0003076,8.18e-10,12;UBERON:0003057,8.18e-10,12;UBERON:0002021,3.47e-09,10;UBERON:0000411,3.47e-09,10;UBERON:0001950,3.47e-09,10;UBERON:0002420,3.33e-07,8;UBERON:0007245,3.33e-07,8;UBERON:0010009,3.33e-07,8;UBERON:0010011,3.33e-07,8;UBERON:0000454,3.33e-07,8
|phase1_expression=15.534438169165,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,12.9265801029626,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.31790010585369,2.9367480345869,3.9119567217402,4.79655344036982,5.4921545683618,3.88859798148567,2.2397827460058,8.62515386189829,0,0,0,0.257259436035947,0.286533439938757,0,16.1853168687678,29.6234948392338,23.4517619297286,2.03306719241479,4.4464739805557,0.449949858640699,0,0.7104801149461,5.09320187881288,7.68436610643109,4.66603255388149,4.59020190327748,4.20649922702764,62.8432165688368,66.9231679083389,4.65465037016825,4.79227355091182,3.67687514644008,93.5984988494804,79.1661496128164,79.4145776934779,24.6627358055462,20.4017445233374,14.5855743755893,100.785062639499,73.1591393041184,71.9679747028776,63.0505172913649,51.5385484492753,27.4007185363192,0.151452386666368,0.226714680320357,0,0,0,0,0,0,2.38755514223978,0.852151612890289,0.779358013808606,2.12003744706204,9.57735254481427,2.56652954828636,0,0,0,0,0,1.7127581957859,0,3.11728492036132,1.73485326766136,2.13125834818499,1.84492397804847,2.26083960828934,1.99900802130698,2.26199864393416,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,41.5748731756397,68.6985198348133,0,0,0,0.127070227073065,96.9145436949203,71.3700940397057,19.0994615211554,59.2740931855663,72.6231898818139,76.6737884424777,74.4687397481008,0.611036183101898,0,0.252722758433675,1.89397670297827,1.56144531555244,2.29902104433473,3.24111833649629,2.71268672104287,3.19771546011241,3.58718416797579,5.05989312622536,8.53721123438752,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,70.6574227175468,12.3485534855141,0.330418782983798,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,105.160636442004,96.934064811752,0,0.504941854408746,1.26203287766503,0.390438744296638,3.23135096599198,0.477937595905104,1.11399337041197,1.13230612315533,0.404810701674894,4.09158201075837,2.76701444562566,63.6216206515178,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,8.17055053809091,1.62054984628179,0.905510786479282,1.71469628025274,1.77340233642274,5.17269571046005,2.96188237083818,7.00269382963578,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,100.500513689696,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.836353184057875,0.436725127492355,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,1.16670713006429,1.16243841129958,1.01373675294467,1.40828686374905,0.39061315453185,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,56.4751842617067,58.4613050364115,56.7166558305003,40.5573510331103,73.3038296154587,74.7839958415803,67.5022500231806,80.1571741739112,77.9404943452832,79.7350880097803,1.97195960409936,2.79317411380722,2.39027048055788,2.91728060481953,5.65955539095552,4.96377472815038,2.889207461421,4.12070114477788,4.1719497246936,4.04315538822076,4.56262739802432,2.64076877940507,3.7456602987953,4.03358460150676,3.21638626151434,4.28664322154766,4.63537303779422,3.8581844092741,4.12085900803307,4.85756436443511,8.22886205724997,4.08194354166476,2.62279808942053,3.77900683244054,4.42314087952054,4.65380343404221,3.84148743032822,5.78753365163254,3.12349461845482,5.05028044491965,4.62676570684279,3.74317033027141,2.86461730218783,3.71848418846318,3.66522560864169,10.4920442733937,1.87145286756327,3.22306581072447,2.29545998482612,1.98532277207564,2.31867835620421
|phase1_expression=15.534438169165,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,12.9265801029626,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.31790010585369,2.9367480345869,3.9119567217402,4.79655344036982,5.4921545683618,3.88859798148567,2.2397827460058,8.62515386189829,0,0,0,0.257259436035947,0.286533439938757,0,16.1853168687678,29.6234948392338,23.4517619297286,2.03306719241479,4.4464739805557,0.449949858640699,0,0.7104801149461,5.09320187881288,7.68436610643109,4.66603255388149,4.59020190327748,4.20649922702764,62.8432165688368,66.9231679083389,4.65465037016825,4.79227355091182,3.67687514644008,93.5984988494804,79.1661496128164,79.4145776934779,24.6627358055462,20.4017445233374,14.5855743755893,100.785062639499,73.1591393041184,71.9679747028776,63.0505172913649,51.5385484492753,27.4007185363192,0.151452386666368,0.226714680320357,0,0,0,0,0,0,2.38755514223978,0.852151612890289,0.779358013808606,2.12003744706204,9.57735254481427,2.56652954828636,0,0,0,0,0,1.7127581957859,0,3.11728492036132,1.73485326766136,2.13125834818499,1.84492397804847,2.26083960828934,1.99900802130698,2.26199864393416,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,41.5748731756397,68.6985198348133,0,0,0,0.127070227073065,96.9145436949203,71.3700940397057,19.0994615211554,59.2740931855663,72.6231898818139,76.6737884424777,74.4687397481008,0.611036183101898,0,0.252722758433675,1.89397670297827,1.56144531555244,2.29902104433473,3.24111833649629,2.71268672104287,3.19771546011241,3.58718416797579,5.05989312622536,8.53721123438752,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,70.6574227175468,12.3485534855141,0.330418782983798,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,105.160636442004,96.934064811752,0,0.504941854408746,1.26203287766503,0.390438744296638,3.23135096599198,0.477937595905104,1.11399337041197,1.13230612315533,0.404810701674894,4.09158201075837,2.76701444562566,63.6216206515178,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,8.17055053809091,1.62054984628179,0.905510786479282,1.71469628025274,1.77340233642274,5.17269571046005,2.96188237083818,7.00269382963578,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,100.500513689696,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.836353184057875,0.436725127492355,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,1.16670713006429,1.16243841129958,1.01373675294467,1.40828686374905,0.39061315453185,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,56.4751842617067,58.4613050364115,56.7166558305003,40.5573510331103,73.3038296154587,74.7839958415803,67.5022500231806,80.1571741739112,77.9404943452832,79.7350880097803,1.97195960409936,2.79317411380722,2.39027048055788,2.91728060481953,5.65955539095552,4.96377472815038,2.889207461421,4.12070114477788,4.1719497246936,4.04315538822076,4.56262739802432,2.64076877940507,3.7456602987953,4.03358460150676,3.21638626151434,4.28664322154766,4.63537303779422,3.8581844092741,4.12085900803307,4.85756436443511,8.22886205724997,4.08194354166476,2.62279808942053,3.77900683244054,4.42314087952054,4.65380343404221,3.84148743032822,5.78753365163254,3.12349461845482,5.05028044491965,4.62676570684279,3.74317033027141,2.86461730218783,3.71848418846318,3.66522560864169,10.4920442733937,1.87145286756327,3.22306581072447,2.29545998482612,1.98532277207564,2.31867835620421
|short_description=p3@Dctn1
}}
}}

Latest revision as of 19:02, 1 October 2015

Short description:p3@Dctn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dctn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000113918, ENSMUST00000113919, ENSMUST00000141680, NM_007835, uc009cnc.1_5end
EntrezGene:Dctn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dctn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F162.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D566.92
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D393.60
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F379.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D779.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4100.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E573.16
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I671.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D663.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.40
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B241.57
cerebellum, neonate N30.CNhs11135.1395-42I268.70
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A496.91
corpus striatum, adult.CNhs10487.19-21D871.37
corpus striatum, neonate N00.CNhs11226.630-43F119.10
cortex, adult.CNhs10473.12-14D559.27
cortex, neonate N30.CNhs11107.1392-42F272.62
diencephalon, adult.CNhs10482.20-12F276.67
diencephalon, neonate N30.CNhs11201.1388-42B274.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G85.06
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E870.66
hippocampus, neonate N00.CNhs11228.627-43G112.35
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2105.16
medulla oblongata, neonate N30.CNhs11200.1396-42A396.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I963.62
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9100.50
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A156.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A473.30
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A574.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A667.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A780.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A877.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A979.74
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.43e-1744
neurectodermal cell3.43e-1744
neural cell1.36e-1643
CNS neuron (sensu Vertebrata)4.17e-1623
neuroblast (sensu Vertebrata)4.17e-1623
neuron1.57e-1433
neuronal stem cell1.57e-1433
neuroblast1.57e-1433
electrically signaling cell1.57e-1433
electrically responsive cell9.26e-1339
electrically active cell9.26e-1339
embryonic cell1.20e-0770

Uber anatomy
Ontology termp-valuen
central nervous system1.56e-4073
nervous system1.13e-3875
neurectoderm2.15e-3564
neural plate2.15e-3564
presumptive neural plate2.15e-3564
regional part of nervous system2.97e-3554
ectoderm-derived structure5.00e-3595
ectoderm5.00e-3595
presumptive ectoderm5.00e-3595
neural tube2.66e-3352
neural rod2.66e-3352
future spinal cord2.66e-3352
neural keel2.66e-3352
ecto-epithelium8.62e-3173
brain4.93e-2947
future brain4.93e-2947
regional part of brain3.38e-2846
pre-chordal neural plate3.19e-2649
structure with developmental contribution from neural crest1.55e-2492
gray matter4.58e-2434
anterior neural tube9.96e-2440
regional part of forebrain8.75e-2339
forebrain8.75e-2339
future forebrain8.75e-2339
brain grey matter3.00e-2029
regional part of telencephalon3.00e-2029
telencephalon3.00e-2029
cerebral cortex3.06e-1421
cerebral hemisphere3.06e-1421
pallium3.06e-1421
regional part of cerebral cortex2.59e-1217
posterior neural tube8.18e-1012
chordal neural plate8.18e-1012
occipital lobe3.47e-0910
visual cortex3.47e-0910
neocortex3.47e-0910
basal ganglion3.33e-078
nuclear complex of neuraxis3.33e-078
aggregate regional part of brain3.33e-078
collection of basal ganglia3.33e-078
cerebral subcortex3.33e-078
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