FFCP PHASE1:Mm9::chr7:117911652..117911670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11717 | |EntrezGene=11717 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3588 | |||
|TSSclassifier=NA | |||
|UniProt=O08739 | |UniProt=O08739 | ||
|association_with_transcript=-49bp_to_ENSMUST00000170374,uc009jfl.1_5end | |||
|cluster_id=chr7:117911652..117911670,+ | |||
|description=CAGE_peak_11_at_Ampd3_5end | |||
|id=chr7:117911652..117911670,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.19e-14!43;UBERON:0007100!1.34e-11!18;UBERON:0000948!1.34e-11!18;UBERON:0005498!1.34e-11!18;UBERON:0004140!1.34e-11!18;UBERON:0009881!1.34e-11!18;UBERON:0004141!1.34e-11!18;UBERON:0003084!1.34e-11!18;UBERON:0007005!1.34e-11!18;UBERON:0004139!1.34e-11!18;UBERON:0004291!1.34e-11!18;UBERON:0004535!5.42e-10!23;UBERON:0001009!5.42e-10!23;UBERON:0004872!2.57e-09!33;UBERON:0000489!8.21e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.39e-19,23;UBERON:0001009,8.39e-19,23;UBERON:0007100,4.58e-18,18;UBERON:0000948,4.58e-18,18;UBERON:0005498,4.58e-18,18;UBERON:0004140,4.58e-18,18;UBERON:0009881,4.58e-18,18;UBERON:0004141,4.58e-18,18;UBERON:0003084,4.58e-18,18;UBERON:0007005,4.58e-18,18;UBERON:0004139,4.58e-18,18;UBERON:0004291,4.58e-18,18;UBERON:0004872,9.26e-17,33;UBERON:0003103,2.51e-16,43;UBERON:0005795,7.42e-12,4;UBERON:0000995,7.42e-12,4;UBERON:0003975,1.71e-09,5;UBERON:0005631,2.67e-09,3;UBERON:0000478,2.67e-09,3;UBERON:0000158,2.67e-09,3;UBERON:0006554,3.14e-09,18;UBERON:0001008,1.13e-08,19;UBERON:0004175,7.23e-08,9;UBERON:0003914,8.17e-08,47;UBERON:0002113,5.73e-07,14;UBERON:0003918,5.73e-07,14;UBERON:0011143,5.73e-07,14;UBERON:0005095,5.73e-07,14;UBERON:0007687,5.73e-07,14;UBERON:0001987,7.55e-07,2;UBERON:0003124,7.55e-07,2;UBERON:0004340,7.55e-07,2 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,0.60492842261366,0.500895729946347,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,1.33016393619462,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0,0,0,0,0,0.218025156380447,1.31811709640683,0.58328969722285,1.95980990275508,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0.528990979272033,0,0,0.889294796111139,0.899899717281399,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.763991238884051,0.294628585473668,0.427115042397309,0,0.681535739998656,2.79614772395106,1.15945795480671,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0.593768556259299,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.352766121407114,0.628332956648377,1.73036477414062,1.01219549843938,0,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,1.04853447583376,0,0.125654352112864,0.347648640384553,0,0.41557608911912,0,0.203678727700633,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,1.54267112887378,2.09280550275367,2.95100741539581,1.16765342367169,3.29119699826961,4.92502392237286,3.40489000092594,3.36259971078264,7.02560368931362,5.63666958793561,0,0,0.330418782983798,0.528901133327089,0.213288250535234,0,0,0,0,0.570676878337677,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,0.911765658574141,2.65593455921881,2.80459281161244,2.98297582898612,3.45512058981041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,0.481651769963376,0.586058432961016,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,6.8054795338476,1.27099242518292,0,0.65954501176592,0,0.120625849856312,0.238744688006273,0.820704498725306,0.291480836629851,0.556275906031529,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.743881101528023,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,2.81523713176773,1.28206136987086,0.214368379079066,2.50786052017682,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.128050304809739,0.229741875822453,0,0,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | |phase1_expression=0,0.348975407639361,1.81999695755814,0.60492842261366,0.500895729946347,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,1.33016393619462,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0,0,0,0,0,0.218025156380447,1.31811709640683,0.58328969722285,1.95980990275508,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0.528990979272033,0,0,0.889294796111139,0.899899717281399,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.763991238884051,0.294628585473668,0.427115042397309,0,0.681535739998656,2.79614772395106,1.15945795480671,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0.593768556259299,0.346970653532272,0.304465478312141,0.691846491768175,0.904335843315735,0.352766121407114,0.628332956648377,1.73036477414062,1.01219549843938,0,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,1.04853447583376,0,0.125654352112864,0.347648640384553,0,0.41557608911912,0,0.203678727700633,0,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,1.54267112887378,2.09280550275367,2.95100741539581,1.16765342367169,3.29119699826961,4.92502392237286,3.40489000092594,3.36259971078264,7.02560368931362,5.63666958793561,0,0,0.330418782983798,0.528901133327089,0.213288250535234,0,0,0,0,0.570676878337677,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,0.911765658574141,2.65593455921881,2.80459281161244,2.98297582898612,3.45512058981041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0,0.481651769963376,0.586058432961016,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,6.8054795338476,1.27099242518292,0,0.65954501176592,0,0.120625849856312,0.238744688006273,0.820704498725306,0.291480836629851,0.556275906031529,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.743881101528023,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,2.81523713176773,1.28206136987086,0.214368379079066,2.50786052017682,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.128050304809739,0.229741875822453,0,0,0,0.412085900803307,0.441596760403192,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | ||
|short_description=p11@Ampd3 | |||
}} | }} |
Latest revision as of 17:33, 25 September 2015
Short description: | p11@Ampd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Ampd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3588 |
Association with transcript: | -49bp_to_ENSMUST00000170374, uc009jfl.1_5end |
EntrezGene: | Ampd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.39e-19 | 23 |
circulatory system | 8.39e-19 | 23 |
primary circulatory organ | 4.58e-18 | 18 |
heart | 4.58e-18 | 18 |
primitive heart tube | 4.58e-18 | 18 |
primary heart field | 4.58e-18 | 18 |
anterior lateral plate mesoderm | 4.58e-18 | 18 |
heart tube | 4.58e-18 | 18 |
heart primordium | 4.58e-18 | 18 |
cardiac mesoderm | 4.58e-18 | 18 |
cardiogenic plate | 4.58e-18 | 18 |
heart rudiment | 4.58e-18 | 18 |
splanchnic layer of lateral plate mesoderm | 9.26e-17 | 33 |
compound organ | 2.51e-16 | 43 |
embryonic uterus | 7.42e-12 | 4 |
uterus | 7.42e-12 | 4 |
internal female genitalia | 1.71e-09 | 5 |
extraembryonic membrane | 2.67e-09 | 3 |
extraembryonic structure | 2.67e-09 | 3 |
membranous layer | 2.67e-09 | 3 |
urinary system structure | 3.14e-09 | 18 |
renal system | 1.13e-08 | 19 |
internal genitalia | 7.23e-08 | 9 |
epithelial tube | 8.17e-08 | 47 |
kidney | 5.73e-07 | 14 |
kidney mesenchyme | 5.73e-07 | 14 |
upper urinary tract | 5.73e-07 | 14 |
kidney rudiment | 5.73e-07 | 14 |
kidney field | 5.73e-07 | 14 |
placenta | 7.55e-07 | 2 |
chorion | 7.55e-07 | 2 |
allantois | 7.55e-07 | 2 |