FFCP PHASE1:Mm9::chr7:148930582..148930596,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:148930582..148930596,+ to FFCP PHASE1:Mm9::chr7:148930582..148930596,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:148930582..148930596,+ | |||
|description=CAGE_peak_at_chr7:148930582..148930596,+ | |||
|id=chr7:148930582..148930596,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.94e-07!6;CL:0000677!6.94e-07!6;CL:0000212!6.94e-07!6;CL:0000584!6.94e-07!6 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.84e-28!43;UBERON:0005409!5.02e-21!59;UBERON:0000344!1.75e-15!15;UBERON:0001242!1.84e-11!13;UBERON:0000060!1.84e-11!13;UBERON:0001262!1.84e-11!13;UBERON:0004786!1.84e-11!13;UBERON:0004923!6.84e-09!24;UBERON:0000331!1.28e-08!3;UBERON:0002116!1.28e-08!3;UBERON:0001204!1.28e-08!3;UBERON:0001168!1.28e-08!3;UBERON:0001007!2.52e-08!128;UBERON:0001555!2.52e-08!128;UBERON:0007026!2.52e-08!128;UBERON:0004119!4.20e-08!130;UBERON:0000925!4.20e-08!130;UBERON:0006595!4.20e-08!130;UBERON:0004921!9.00e-07!126;UBERON:0004185!9.00e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.57e-33,31;UBERON:0005409,1.13e-23,47;UBERON:0000344,1.32e-17,15;UBERON:0002108,1.43e-17,4;UBERON:0000331,1.20e-13,3;UBERON:0002116,1.20e-13,3;UBERON:0001204,1.20e-13,3;UBERON:0001168,1.20e-13,3;UBERON:0001242,1.23e-11,13;UBERON:0001262,1.23e-11,13;UBERON:0004786,1.23e-11,13;UBERON:0004923,1.31e-10,24;UBERON:0001007,1.87e-10,116;UBERON:0001555,1.87e-10,116;UBERON:0007026,1.87e-10,116;UBERON:0004119,3.17e-10,118;UBERON:0000925,3.17e-10,118;UBERON:0006595,3.17e-10,118;UBERON:0001962,1.00e-09,2;UBERON:0001961,1.00e-09,2;UBERON:0001744,1.00e-09,2;UBERON:0001155,1.81e-09,2;UBERON:0000059,1.81e-09,2;UBERON:0004921,4.33e-08,114;UBERON:0002465,9.45e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,4.36486106970913,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,3.89995777814189,0,1.29228598847722,1.939241094173,10.8313349090133,1.51218077855958,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,1.32225283331772,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,1.4822905925161,0.251335208800269,1.79060824837036,1.55971269695296,4.49409704327111,15.1296634912286,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.30246421130683,0.500895729946347,4.36486106970913,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,3.89995777814189,0,1.29228598847722,1.939241094173,10.8313349090133,1.51218077855958,3.54768817048488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.65209391491899,1.32225283331772,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0.949058123089023,1.4822905925161,0.251335208800269,1.79060824837036,1.55971269695296,4.49409704327111,15.1296634912286,7.56736838366595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07383957266869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:148930582..148930596,+ | |||
}} | }} |
Latest revision as of 13:22, 4 August 2015
Short description: | p@chr7:148930582..148930596, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148930582..148930596, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.57e-33 | 31 |
gastrointestinal system | 1.13e-23 | 47 |
mucosa | 1.32e-17 | 15 |
small intestine | 1.43e-17 | 4 |
ileal mucosa | 1.20e-13 | 3 |
ileum | 1.20e-13 | 3 |
mucosa of small intestine | 1.20e-13 | 3 |
wall of small intestine | 1.20e-13 | 3 |
intestinal mucosa | 1.23e-11 | 13 |
wall of intestine | 1.23e-11 | 13 |
gastrointestinal system mucosa | 1.23e-11 | 13 |
organ component layer | 1.31e-10 | 24 |
digestive system | 1.87e-10 | 116 |
digestive tract | 1.87e-10 | 116 |
primitive gut | 1.87e-10 | 116 |
endoderm-derived structure | 3.17e-10 | 118 |
endoderm | 3.17e-10 | 118 |
presumptive endoderm | 3.17e-10 | 118 |
gut-associated lymphoid tissue | 1.00e-09 | 2 |
mucosa-associated lymphoid tissue | 1.00e-09 | 2 |
lymphoid tissue | 1.00e-09 | 2 |
colon | 1.81e-09 | 2 |
large intestine | 1.81e-09 | 2 |
subdivision of digestive tract | 4.33e-08 | 114 |
lymphoid system | 9.45e-07 | 3 |