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FFCP PHASE1:Mm9::chr7:63305505..63305587,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:63305505..63305587,+
|DHSsupport=NA
|short_description=p1@Herc2
|DPIdataset=NA
|description=CAGE_peak_1_at_Herc2_5end
|association_with_transcript=0bp_to_ENSMUST00000041015,ENSMUST00000076226,NM_010418,uc009hdv.1_5end
|EntrezGene=15204
|EntrezGene=15204
|HGNC=
|HGNC=
|MCL_coexpression_id=2020
|TSSclassifier=NA
|UniProt=F8WJE1,Q4U2R1
|UniProt=F8WJE1,Q4U2R1
|association_with_transcript=0bp_to_ENSMUST00000041015,ENSMUST00000076226,NM_010418,uc009hdv.1_5end
|cluster_id=chr7:63305505..63305587,+
|description=CAGE_peak_1_at_Herc2_5end
|id=chr7:63305505..63305587,+
|ontology_enrichment_celltype=CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-09,23;CL:0000337,5.66e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.19e-15,54;UBERON:0001049,6.48e-14,52;UBERON:0005068,6.48e-14,52;UBERON:0006241,6.48e-14,52;UBERON:0007135,6.48e-14,52;UBERON:0002020,8.35e-13,34;UBERON:0000955,1.77e-12,47;UBERON:0006238,1.77e-12,47;UBERON:0002616,5.99e-12,46;UBERON:0002346,9.68e-12,64;UBERON:0003075,9.68e-12,64;UBERON:0007284,9.68e-12,64;UBERON:0003080,1.10e-11,40;UBERON:0003528,2.05e-11,29;UBERON:0002791,2.05e-11,29;UBERON:0001893,2.05e-11,29;UBERON:0002780,3.81e-11,39;UBERON:0001890,3.81e-11,39;UBERON:0006240,3.81e-11,39;UBERON:0003056,6.85e-11,49;UBERON:0001017,1.14e-10,73;UBERON:0010371,4.77e-10,73;UBERON:0001016,4.77e-10,75;UBERON:0004121,1.87e-08,95;UBERON:0000924,1.87e-08,95;UBERON:0006601,1.87e-08,95;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000956,7.74e-08,21;UBERON:0001869,7.74e-08,21;UBERON:0000203,7.74e-08,21
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39.2406571554818,44.9302217818693,39.9358645387635,44.5459630042202,43.6960482286819,47.1124697634415,43.4514863693489,44.5875508123767,44.7364305422586,100.90103602447,47.3967450959413,39.8754962001605,41.8070054939702,42.3644221006958,48.4904080158533,47.2949671742388,65.102192421975,115.345278868282,91.5603817930563,99.9464121714793,67.6263798144302,35.4769126757787,35.6407021361951,37.1573553716494,48.1581811345525,42.3191285684094,53.7273659354261,56.7127784350376,65.2243266665034,58.1457934777649,61.8064514888832,69.9747583711422,67.4445009898709,69.1911260914888,40.3580082835076,22.6425672441546,14.0850754876877,24.5111539891555,52.1611903886914,54.8032828317451,44.6889963212127,35.799519306204,63.6996572124911,124.810157218372,128.430740985502,124.318326416349,129.405446304797,126.055183637798,151.83417337533,136.354545046825,121.58672487054,137.755292331198,134.099920743721,39.2316173868188,53.0703081623371,49.683479274453,54.9421180574345,42.5514720134804,45.7770336040535,57.5619025006183,58.513956255846,59.3700537744858,64.9431834232959,60.3280733738771,52.4381229053292,56.6531120192789,52.3725746671831,53.9319053493209,63.3470609406488,63.8522635956154,51.6996710842729,54.3953389060365,63.5899334980596,67.5452427199268,61.0516773188121,61.7549731963561,62.3536127352689,63.4297223999328,65.4917065081576,65.8540702341981,72.8703100682825,58.5315730675664,67.8982148705863,63.351099678309,61.5653014847272,60.1569633459443,65.0734732981057,47.2621196903796,54.2088954125343,37.4290573512653,43.4039529177563,41.1269913948013,38.1623155076762,38.49006071299
|phase1_expression=41.3184025530368,63.1645487827244,71.4348805841572,133.084252975005,110.197060588196,51.8746950207739,43.2183385101723,67.7897448068275,31.1143075955184,40.0250340010609,40.5786584694447,43.9544596064304,81.3203467173227,76.6676929214607,67.2881718867639,75.9282252711847,66.4583784221739,73.9758777765067,83.3655756322892,78.9364752344336,72.7970563693157,25.120610653824,26.1199789138935,49.7576434887495,44.505400527031,38.4735415957064,58.5836314776342,41.3704766756907,18.812318526181,25.2030129759931,27.4945833212578,33.0215950199008,28.2929802288902,31.6963362030877,23.6858328196045,17.9533416987172,26.542016314108,35.1566569819002,21.8773896466664,46.0700894696943,38.8232782100469,49.8623204019665,40.7828696546169,31.6001013118699,32.2378641278056,34.5067894063961,32.8604364626176,21.3664653252838,11.643367684927,28.7756250629939,18.8981669194239,14.3752564364972,62.4151294534779,79.7898356212479,84.023449785616,25.7259436035947,46.9914841499561,37.1283906439758,81.7358501872775,83.5805747249812,71.6229485961982,15.2480039431109,11.5608323494448,14.8483453351431,10.8775299882367,8.5257613793532,8.38880309451533,16.9056054341484,71.3384532682326,62.7777613242362,66.6730127483881,50.845875223877,56.5423464836131,63.8177063909911,59.1366556182518,69.8606277823616,100.205451709444,97.8085009732538,99.9978531498145,85.726087024626,80.3261510829157,86.9925328829789,66.1663707633273,98.483456755544,99.777255798257,109.601833796204,101.51100840976,97.6733096124575,34.8340489332647,46.4765094656731,75.9444960398396,35.2773789562368,17.6792546764015,26.9851595818909,51.3323369783659,42.5625542742469,37.4986601751777,16.7021716126497,9.61208217030615,11.6602059588412,41.9713390934508,46.1975318691544,152.883143823987,127.9920065676,19.4841936910093,20.2687892380079,18.704404465547,41.7912999771759,80.5296818142704,49.4312323085867,44.5857289788969,47.1921491383819,40.5883275170663,43.2573978386027,43.1550555188037,34.8096457983201,41.2815596116404,40.6324192944952,59.2689069806416,39.147577687273,56.3145872074004,66.4279096795254,44.7340226923493,96.0321014197875,85.0353629662628,38.5740153364973,26.1196971422906,19.196887391789,21.3477981482749,109.64674804433,120.780159144117,87.8323921268922,131.585010385553,173.119364612634,92.8812559181234,132.226629400222,35.4400986199101,59.8397528634547,47.2591558270972,77.6530448221089,32.7903516266013,28.7377630541841,39.6136685571768,51.6917525176503,59.7360462548659,65.5942247858431,62.9675589041378,92.6158067245676,31.0417909823293,48.6002626031296,51.3777282558731,30.6874025398605,61.4484420788571,34.8252166522167,43.2142486456681,45.3798128346164,16.8531164955176,20.5878325691772,18.4706274607135,36.4541359662483,39.1658520168431,33.8516675546708,37.8791576936336,48.4040010098613,35.9442373027591,40.2283724418206,40.5092836113425,41.334931197978,42.2918814277645,47.2802296547794,58.7748869207454,55.4097952342009,53.1311279004343,53.0115354103468,111.663962687552,82.6324037405654,73.3529698224032,51.5678604993911,38.6051733468773,47.6085177313899,37.6292987060513,35.6979838583316,41.5846941989907,38.4255764747369,44.6057317851841,41.3394376357267,53.2830642656571,38.7965120480244,45.6215963858741,51.2327062932906,50.1440275709291,58.9458168832927,18.3977863924489,44.0999258673553,41.7018621990398,41.1375682247535,42.0876897153748,41.0294546358364,49.5774451054177,43.9878240979214,44.1166425234263,43.5591988643956,36.7601257588065,48.3850806576673,43.4395379200179,51.4934237361315,67.75528054376,58.1236955003325,49.6520410973769,51.7853047411459,33.0755862621072,34.0456152353221,34.5043695665651,33.8648262378338,39.6287844855492,41.1703571053792,46.2845326886533,32.806159452709,53.3936719581488,31.4555743539005,38.1338044874341,48.716839617479,49.5196423888739,48.4093084006848,41.4195935141664,68.2967767502296,69.359463406724,68.2111244118227,71.7546458958692,68.82259218061,57.3314139794773,65.0920763616802,36.1899081454253,52.2149456465961,35.4070276573706,38.0792709900531,92.7982410129437,116.039569726281,20.0000633359544,56.0485458393708,32.8128548192907,29.6733445665445,47.8239942966814,38.951914066266,36.9845798976774,56.8983826885553,46.148419990938,45.007402118342,60.4790300258181,106.357355735618,54.5049927199751,36.5034487517873,38.9299832855047,54.1102003349916,38.4960901185892,31.3187020639926,33.8602383800521,38.2868311904473,49.0201142182083,48.5747533751405,41.3485269069154,51.6217895858058,47.7706487035527,60.9950942816125,51.6551182017494,56.7245487865028,66.7261627277424,43.3947236615458,37.6433769807816,52.9412476528033,52.492709158113,57.2563904502647,58.4149023137529,46.8876021636483,53.0358060223985,43.8492386688108,67.7022182028733,83.2675577354474,42.788073074415,50.7834827895072,47.271448225242,50.7195380212239,53.9239547765224,91.9709497972128,72.9618661006831,48.9136877072837,52.4100512456284,74.970645887867,86.937528830572,75.2680189849459,30.4261389689001,32.1888340344413,30.2657942631688,8.59203556213602,32.5826073388569,39.2406571554818,44.9302217818693,39.9358645387635,44.5459630042202,43.6960482286819,47.1124697634415,43.4514863693489,44.5875508123767,44.7364305422586,100.90103602447,47.3967450959413,39.8754962001605,41.8070054939702,42.3644221006958,48.4904080158533,47.2949671742388,65.102192421975,115.345278868282,91.5603817930563,99.9464121714793,67.6263798144302,35.4769126757787,35.6407021361951,37.1573553716494,48.1581811345525,42.3191285684094,53.7273659354261,56.7127784350376,65.2243266665034,58.1457934777649,61.8064514888832,69.9747583711422,67.4445009898709,69.1911260914888,40.3580082835076,22.6425672441546,14.0850754876877,24.5111539891555,52.1611903886914,54.8032828317451,44.6889963212127,35.799519306204,63.6996572124911,124.810157218372,128.430740985502,124.318326416349,129.405446304797,126.055183637798,151.83417337533,136.354545046825,121.58672487054,137.755292331198,134.099920743721,39.2316173868188,53.0703081623371,49.683479274453,54.9421180574345,42.5514720134804,45.7770336040535,57.5619025006183,58.513956255846,59.3700537744858,64.9431834232959,60.3280733738771,52.4381229053292,56.6531120192789,52.3725746671831,53.9319053493209,63.3470609406488,63.8522635956154,51.6996710842729,54.3953389060365,63.5899334980596,67.5452427199268,61.0516773188121,61.7549731963561,62.3536127352689,63.4297223999328,65.4917065081576,65.8540702341981,72.8703100682825,58.5315730675664,67.8982148705863,63.351099678309,61.5653014847272,60.1569633459443,65.0734732981057,47.2621196903796,54.2088954125343,37.4290573512653,43.4039529177563,41.1269913948013,38.1623155076762,38.49006071299
|short_description=p1@Herc2
}}
}}

Latest revision as of 23:45, 26 September 2015

Short description:p1@Herc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Herc2_5end
Coexpression cluster:MCL_coexpression_mm9:2020
Association with transcript: 0bp_to_ENSMUST00000041015, ENSMUST00000076226, NM_010418, uc009hdv.1_5end
EntrezGene:Herc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Herc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I563.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I671.43
CD326+ enterocyte, pool1.CNhs13542.11848-124I3133.08
CD326+ enterocyte, pool2.CNhs13197.11849-124I4110.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I751.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I843.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E967.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E731.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F240.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E640.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F143.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E481.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E876.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A167.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A375.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A566.46
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A273.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A483.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A678.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A372.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.12
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D149.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D244.51
GP2+ M cell, pool1.CNhs13228.11845-124H938.47
GP2+ M cell, pool2.CNhs13231.11846-124I158.58
GP2+ M cell, pool3.CNhs13240.11847-124I241.37
Ileum epithelium, pool1.CNhs13199.10252-104B918.81
Ileum epithelium, pool2.CNhs13232.10253-104C125.20
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I333.02
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G628.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.95
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H346.07
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G938.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H249.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H440.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D932.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B334.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A262.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I979.79
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A184.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E146.99
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C537.13
Mouse Granule cells, donor1.CNhs12131.11713-123C381.74
Mouse Granule cells, donor2.CNhs12357.11731-123E383.58
Mouse Granule cells, donor3.CNhs12108.11636-122C771.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.25
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D571.34
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F562.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D966.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F150.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D556.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D263.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.14
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D669.86
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3100.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F397.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7100.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D485.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F480.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D886.99
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E466.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E598.48
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I699.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6109.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6101.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E197.67
Mouse Schwann, donor1.CNhs12507.11728-123D934.83
Mouse Schwann, donor2.CNhs12573.11746-123F946.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G375.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.33
Mouse hepatocyte, donor8.CNhs13091.11824-124F642.56
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A737.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G641.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H146.20
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8152.88
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6127.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B641.79
accessory axillary lymph node, adult.CNhs10475.1063-29H980.53
adrenal gland, adult.CNhs10508.49-24D749.43
adrenal gland, embryo E14.CNhs11038.406-44C544.59
adrenal gland, embryo E16.CNhs11004.1254-43D647.19
adrenal gland, embryo E17.CNhs11043.1263-45I140.59
adrenal gland, embryo E18.CNhs11026.1262-18F543.26
adrenal gland, neonate N00.CNhs11191.1311-23C143.16
adrenal gland, neonate N25.CNhs11223.1377-27I334.81
amnion, adult pregnant day17.5.CNhs10488.583-22A841.28
aorta, adult.CNhs10498.46-23H140.63
bone (os femoris), adult.CNhs10483.56-12G259.27
bone (os femoris), neonate N02.CNhs11227.1985-43F539.15
bone (os femoris), neonate N16.CNhs11225.1525-43A656.31
bone (os femoris), neonate N20.CNhs11195.1350-25C366.43
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B296.03
cerebellum, neonate N30.CNhs11135.1395-42I285.04
colon, adult.CNhs10468.36-18H738.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.35
corpora quadrigemina, adult.CNhs10501.16-22A4109.65
corpus striatum, adult.CNhs10487.19-21D8120.78
corpus striatum, neonate N00.CNhs11226.630-43F187.83
cortex, adult.CNhs10473.12-14D5131.59
cortex, neonate N30.CNhs11107.1392-42F2173.12
diencephalon, adult.CNhs10482.20-12F292.88
diencephalon, neonate N30.CNhs11201.1388-42B2132.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B135.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A259.84
epididymis, adult.CNhs10490.58-23B247.26
eyeball, adult.CNhs10484.31-12G477.65
eyeball, embryo E12.CNhs11016.345-16C632.79
eyeball, embryo E14.CNhs10521.399-16E228.74
eyeball, embryo E15.CNhs10593.426-16C939.61
eyeball, embryo E17.CNhs11023.1261-18D451.69
eyeball, neonate N00.CNhs11207.633-15C659.74
eyeball, neonate N01.CNhs11140.1532-43E765.59
eyeball, neonate N02.CNhs11205.1551-44G862.97
eyeball, neonate N16.CNhs11188.777-19A292.62
forelimb, embryo E11.CNhs10596.335-25E231.04
forelimb, embryo E12.CNhs10600.359-14H248.60
forelimb, embryo E13.CNhs10589.384-1E251.38
forelimb, embryo E14.CNhs10577.413-26A830.69
forelimb, embryo E15.CNhs11007.437-20E761.45
forelimb, embryo E17.CNhs10598.1517-43C434.83
forelimb, embryo E18.CNhs11008.1520-43B543.21
gonad, embryo E13.CNhs11044.1564-45I645.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.59
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.47
heart, embryo E11.CNhs10586.331-24E936.45
heart, embryo E12.CNhs11015.353-12F539.17
heart, embryo E13.CNhs11013.376-3I933.85
heart, embryo E14.CNhs10597.403-26D437.88
heart, embryo E15.CNhs11017.431-16C848.40
heart, embryo E16.CNhs11021.457-17C635.94
heart, embryo E17.CNhs11025.479-18E540.23
heart, embryo E18.CNhs11030.1283-20G340.51
heart, neonate N00.CNhs11213.639-21E341.33
heart, neonate N03.CNhs11221.1349-25I242.29
heart, neonate N10.CNhs11118.749-24G147.28
heart, neonate N16.CNhs11209.782-15G158.77
heart, neonate N20.CNhs11127.821-26I655.41
heart, neonate N25.CNhs11196.1351-25D353.13
heart, neonate N30.CNhs11202.1390-42D253.01
hippocampus, adult.CNhs10478.13-16E8111.66
hippocampus, neonate N00.CNhs11228.627-43G182.63
intestinal mucosa, adult.CNhs10506.860-29I373.35
intestine, adult.CNhs10496.178-9A351.57
intestine, embryo E12.CNhs11019.1251-16I538.61
intestine, embryo E13.CNhs11010.381-16D547.61
intestine, embryo E15.CNhs10602.976-16D837.63
intestine, embryo E16.CNhs10585.463-22H435.70
intestine, embryo E17.CNhs10582.482-18D341.58
intestine, embryo E18.CNhs10526.1289-20F738.43
intestine, neonate N00.CNhs11126.644-26D144.61
intestine, neonate N01.CNhs11192.1322-23E941.34
intestine, neonate N06.CNhs11102.688-20B853.28
intestine, neonate N07.CNhs11095.720-20F238.80
intestine, neonate N10.CNhs11098.755-23A545.62
intestine, neonate N20.CNhs11187.827-18D151.23
intestine, neonate N25.CNhs11121.1352-25E350.14
intestine, neonate N30.CNhs11131.1384-42G158.95
kidney, embryo E14.CNhs10606.411-4I918.40
kidney, embryo E15.CNhs10997.434-16F844.10
kidney, embryo E16.CNhs10584.464-22A541.70
kidney, embryo E17.CNhs11028.483-18I241.14
kidney, embryo E18.CNhs11001.1288-20C742.09
kidney, neonate N00.CNhs11214.646-21G741.03
kidney, neonate N10.CNhs11206.758-6D549.58
kidney, neonate N20.CNhs11113.832-19I143.99
kidney, neonate N25.CNhs11122.1353-25F344.12
kidney, neonate N30.CNhs11203.1385-42H143.56
liver, adult pregnant day01.CNhs10466.508-5B236.76
liver, embryo E12.CNhs10601.355-15F848.39
liver, embryo E13.CNhs10524.378-3H643.44
liver, embryo E14.CNhs10594.409-16E151.49
liver, embryo E15.CNhs10520.433-16D767.76
liver, embryo E16.CNhs10523.462-17F558.12
liver, embryo E17.CNhs10510.481-18A349.65
liver, embryo E18.CNhs10579.499-43G451.79
liver, neonate N00.CNhs11117.641-24F433.08
liver, neonate N03.CNhs11123.1345-25G234.05
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B939.63
liver, neonate N20.CNhs11220.823-25A341.17
liver, neonate N25.CNhs11198.1368-26H146.28
liver, neonate N30.CNhs11106.1382-42D132.81
lung, adult.CNhs10474.28-22B153.39
lung, embryo E12.CNhs10522.354-16G231.46
lung, embryo E14.CNhs10604.404-26F838.13
lung, embryo E15.CNhs11020.432-17C548.72
lung, embryo E16.CNhs10998.458-17B649.52
lung, embryo E17.CNhs10605.480-44A648.41
lung, embryo E18.CNhs10583.1287-20I641.42
lung, neonate N00.CNhs11224.640-42C668.30
lung, neonate N06.CNhs11212.683-20E569.36
lung, neonate N07.CNhs11111.715-19A368.21
lung, neonate N10.CNhs11219.750-23E671.75
lung, neonate N20.CNhs11109.822-18A468.82
lung, neonate N25.CNhs11119.1359-25C757.33
lung, neonate N30.CNhs11133.1394-42H265.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A152.21
mammary gland, adult lactating day02.CNhs10480.595-22B635.41
mammary gland, adult pregnant day19.CNhs10476.588-5H238.08
medulla oblongata, adult.CNhs10477.17-12C292.80
medulla oblongata, neonate N30.CNhs11200.1396-42A3116.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C256.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.81
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E229.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E347.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D738.95
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.98
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D956.90
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D446.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D545.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.48
olfactory brain, adult.CNhs10489.18-22I9106.36
ovary, adult.CNhs10507.91-2I754.50
ovary, embryo E18.CNhs11040.505-44H736.50
ovary, neonate N00.CNhs11217.1299-22I438.93
oviduct, adult pregnant day01.CNhs10500.988-6G654.11
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F431.32
pancreas, embryo E15.CNhs11042.1556-45F233.86
pancreas, embryo E16.CNhs11003.460-26E538.29
pancreas, embryo E17.CNhs10599.1558-45G349.02
pancreas, embryo E18.CNhs10580.1535-43I748.57
pancreas, neonate N00.CNhs11105.645-26G941.35
pancreas, neonate N01.CNhs11138.1531-43D751.62
pancreas, neonate N02.CNhs11139.1539-43D847.77
pancreas, neonate N16.CNhs11136.787-43B661.00
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H556.72
pituitary gland, adult.CNhs10493.21-1G866.73
pituitary gland, embryo E12.CNhs11018.346-16E643.39
pituitary gland, embryo E13.CNhs11009.370-44C737.64
pituitary gland, embryo E14.CNhs11037.398-44A552.94
pituitary gland, embryo E15.CNhs10592.427-16B952.49
pituitary gland, embryo E16.CNhs11036.449-43F657.26
pituitary gland, embryo E17.CNhs11039.1265-44F558.41
pituitary gland, neonate N00.CNhs11190.1308-22E946.89
placenta, adult pregnant day10.CNhs10472.539-13I753.04
placenta, adult pregnant day17.CNhs10464.577-18G343.85
prostate, adult.CNhs10470.859-1F867.70
skin, adult.CNhs10492.30-1C383.27
skin, neonate N00.CNhs11124.650-25G442.79
skin, neonate N03.CNhs11215.662-22H350.78
skin, neonate N06.CNhs11097.693-20I547.27
skin, neonate N10.CNhs11108.762-6C450.72
small intestine, neonate N16.CNhs11114.790-21I153.92
spinal cord, adult.CNhs10505.24-13C991.97
spleen, adult.CNhs10465.25-2G272.96
spleen, embryo E16.CNhs11035.461-43C148.91
spleen, embryo E18.CNhs11011.1271-21F252.41
spleen, neonate N10.CNhs11116.752-24D174.97
spleen, neonate N20.CNhs11112.824-19H186.94
spleen, neonate N25.CNhs11099.1354-25G375.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D330.27
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E332.58
stomach, embryo E15.CNhs10603.1252-16G839.24
stomach, embryo E16.CNhs11022.459-17D444.93
stomach, embryo E17.CNhs11006.1035-18D539.94
stomach, embryo E18.CNhs10999.1286-20C644.55
stomach, neonate N03.CNhs11193.1340-24B843.70
stomach, neonate N07.CNhs11210.718-18A947.11
stomach, neonate N25.CNhs11104.1355-25E443.45
stomach, neonate N30.CNhs11134.1386-42I144.59
submandibular gland, adult.CNhs10469.59-29C144.74
testis, adult.CNhs10504.57-7G5100.90
testis, embryo E13.CNhs11031.389-23F547.40
testis, embryo E15.CNhs11034.443-27C539.88
testis, embryo E16.CNhs11033.470-26G541.81
testis, embryo E17.CNhs11029.486-18I542.36
testis, embryo E18.CNhs11027.503-18G548.49
testis, neonate N00.CNhs11189.1300-22B747.29
testis, neonate N07.CNhs11222.726-26I465.10
testis, neonate N10.CNhs11204.763-44D9115.35
testis, neonate N20.CNhs11110.839-18H391.56
testis, neonate N30.CNhs11130.1391-42E299.95
thymus, adult.CNhs10471.38-12B567.63
thymus, embryo E14.CNhs11041.402-44I435.48
thymus, embryo E15.CNhs11005.430-45I235.64
thymus, embryo E16.CNhs11002.456-26C537.16
thymus, embryo E17.CNhs10581.478-18C148.16
thymus, embryo E18.CNhs10595.1273-19G442.32
thymus, neonate N02.CNhs11181.1541-43F853.73
thymus, neonate N03.CNhs11137.2104-43C756.71
thymus, neonate N06.CNhs11197.681-26C465.22
thymus, neonate N07.CNhs11211.713-19D358.15
thymus, neonate N10.CNhs11194.748-24E461.81
thymus, neonate N20.CNhs11186.820-7A269.97
thymus, neonate N25.CNhs11125.1362-25G767.44
thymus, neonate N30.CNhs11132.1393-42G269.19
tongue, adult.CNhs10499.32-1B440.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.51
urinary bladder, adult.CNhs10481.879-12E452.16
uterus, adult pregnant day19.CNhs10497.590-15F554.80
uterus, adult.CNhs10509.92-27E544.69
vagina, adult.CNhs10502.89-27D535.80
vesicular gland, adult.CNhs10491.51-27F863.70
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1124.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2128.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3124.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7129.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4126.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5151.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6136.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7121.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8137.76
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9134.10
whole body, embryo E11.CNhs11014.324-5I839.23
whole body, embryo E12.CNhs10587.857-27C953.07
whole body, embryo E13.CNhs10512.372-23H249.68
whole body, embryo E14.5.CNhs10578.420-27D254.94
whole body, embryo E14.CNhs10519.395-14B142.55
whole body, embryo E16.CNhs10514.453-14F245.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G557.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G558.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G559.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G564.94
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G560.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G552.44
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G556.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G552.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G553.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G563.35
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G563.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G551.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G554.40
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G563.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G567.55
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G561.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G561.75
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G562.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G563.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G565.49
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G565.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G572.87
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G558.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G567.90
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G563.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G561.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G560.16
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G565.07
whole body, embryo E17.5.CNhs10513.490-9F947.26
whole body, embryo E17.CNhs10517.475-3I554.21
whole body, embryo E18.CNhs10516.493-3B337.43
whole body, neonate N00.CNhs10525.657-19C243.40
whole body, neonate N01.CNhs10576.659-23C641.13
whole body, neonate N06.CNhs10515.692-21D138.16
whole body, neonate N10.CNhs10518.761-6B438.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.66e-0923
neuroblast (sensu Vertebrata)5.66e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.19e-1554
neural tube6.48e-1452
neural rod6.48e-1452
future spinal cord6.48e-1452
neural keel6.48e-1452
gray matter8.35e-1334
brain1.77e-1247
future brain1.77e-1247
regional part of brain5.99e-1246
neurectoderm9.68e-1264
neural plate9.68e-1264
presumptive neural plate9.68e-1264
anterior neural tube1.10e-1140
brain grey matter2.05e-1129
regional part of telencephalon2.05e-1129
telencephalon2.05e-1129
regional part of forebrain3.81e-1139
forebrain3.81e-1139
future forebrain3.81e-1139
pre-chordal neural plate6.85e-1149
central nervous system1.14e-1073
ecto-epithelium4.77e-1073
nervous system4.77e-1075
ectoderm-derived structure1.87e-0895
ectoderm1.87e-0895
presumptive ectoderm1.87e-0895
occipital lobe6.52e-0810
visual cortex6.52e-0810
neocortex6.52e-0810
cerebral cortex7.74e-0821
cerebral hemisphere7.74e-0821
pallium7.74e-0821
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