FFCP PHASE1:Mm9::chr7:82846851..82846900,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:82846851..82846900,+ to FFCP PHASE1:Mm9::chr7:82846851..82846900,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75547 | |EntrezGene=75547 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=E9PVD4,Q8BYV7,Q3UZK5 | |UniProt=E9PVD4,Q8BYV7,Q3UZK5 | ||
|association_with_transcript=0bp_to_ENSMUST00000094307,ENSMUST00000132656,uc009hwv.1,uc009hww.2_5end | |||
|cluster_id=chr7:82846851..82846900,+ | |||
|description=CAGE_peak_2_at_Akap13_5end | |||
|id=chr7:82846851..82846900,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.62e-10!32;CL:0002032!2.62e-10!32;CL:0000037!2.62e-10!32;CL:0000566!2.62e-10!32;CL:0000837!2.62e-10!32;CL:0002031!1.70e-08!25;CL:0000738!8.88e-08!17;CL:0002087!8.88e-08!17;CL:0000838!2.62e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.16e-10,32;CL:0002032,1.16e-10,32;CL:0000037,1.16e-10,32;CL:0000837,1.16e-10,32;CL:0002031,6.72e-09,25;CL:0000738,9.03e-08,17;CL:0002087,9.03e-08,17;CL:0000838,2.27e-07,12;CL:0000084,9.74e-07,11;CL:0000827,9.74e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.37e-19!48;UBERON:0002405!1.66e-18!70;UBERON:0002390!1.81e-17!45;UBERON:0003061!1.81e-17!45;UBERON:0005057!1.45e-09!51;UBERON:0004177!1.87e-09!29;UBERON:0002371!3.96e-09!16;UBERON:0001474!2.07e-08!22;UBERON:0004765!2.07e-08!22;UBERON:0001434!2.07e-08!22;UBERON:0003081!2.34e-08!88;UBERON:0001041!8.36e-08!92;UBERON:0000077!1.45e-07!97;UBERON:0000926!5.18e-07!193;UBERON:0004120!5.18e-07!193;UBERON:0006603!5.18e-07!193;UBERON:0003408!7.15e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.26e-19,48;UBERON:0002405,2.26e-19,48;UBERON:0002390,5.11e-18,45;UBERON:0003061,5.11e-18,45;UBERON:0004177,7.26e-10,29;UBERON:0005057,7.26e-10,29;UBERON:0002371,3.27e-09,16;UBERON:0001474,1.84e-08,22;UBERON:0004765,1.84e-08,22;UBERON:0001434,1.84e-08,22;UBERON:0001041,2.66e-08,80;UBERON:0000077,7.27e-08,35;UBERON:0003081,1.11e-07,87;UBERON:0003408,3.17e-07,24;UBERON:0002370,6.24e-07,23;UBERON:0000974,6.24e-07,23;UBERON:0004807,6.24e-07,23;UBERON:0005058,6.24e-07,23;UBERON:0003351,6.24e-07,23;UBERON:0009113,6.24e-07,23;UBERON:0003295,6.24e-07,23;UBERON:0009722,6.24e-07,23;UBERON:0005562,6.24e-07,23;UBERON:0007690,6.24e-07,23 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,0.30246421130683,0,0.16787927191189,0.467225281191051,69.5974713350096,35.056391815765,36.982195158875,15.923271044972,11.0883301003518,119.669310221913,112.072955901155,24.3170126125434,46.56931149966,18.88817070946,194.482424943354,216.22946179625,152.780274647291,5.6128571499706,23.1347916298063,20.112383763698,15.359272588167,11.2410547722913,0.57423196411502,0,0.215471232685889,2.09025761402011,3.02436155711917,3.10422714917427,0,0,0,0,0,0,161.134677833709,90.6348999647608,156.533599448166,178.234140873397,165.297007359944,127.203712494162,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,131.877128361381,60.2050577869416,95.4506389564598,0.257259436035947,1.43266719969378,1.54701627683233,0.202316460859598,0,0,0,0,29.2467408116455,58.3431153914515,18.4724829885986,7.78960287347852,10.7581125490035,0.311068836925433,0.810035629990144,0.210324961351382,1.42825492201902,1.10434270475807,0.244981598429908,0.766763768145891,1.83843757322004,2.20231761998777,3.31987079021488,2.61131106535614,0.791317726381163,0.548925861614458,2.08365348222704,2.23346399201105,4.50210088025344,1.83357897332172,1.76777151284201,2.13557521198654,0.745597783301202,0.605809546665472,0.377857800533928,0.289864488701678,4.30211938490693,0,0,3.24888208723835,1.79210754838934,8.00533194750986,0,0,0,0,0,0,0,0,0.506719730950197,0,11.9893073705013,202.748362895735,10.3909497345377,1.38788261412909,2.43572382649713,2.99800146432876,2.71300752994721,3.64524992120685,1.75933227861546,0.741584903203122,12.1463459812726,63.6919597403909,6.47067399789637,25.3967746229453,34.4261429726008,11.1835056730873,1.17112318804619,2.30391377494801,9.19645398750929,26.5989576403143,16.197373736822,30.1156438163163,2.69623150928681,7.32000964509802,0.628271760564322,4.51943232499919,2.81287003063364,3.1168206683934,5.84068547043927,3.86989582631202,31.9725914467939,2.77995034277042,5.05060454127538,1.82168620147785,0.689706313300419,1.26043490863744,2.26057226753573,1.29269348387523,1.66547836370305,1.87403449119458,3.10444044886819,0.862271971731369,0.756424320671277,0.703804496655795,1.97276159184817,1.94633074457919,1.39300866608867,3.90986059175093,1.39323986772945,34.4084461783485,34.7419674604865,38.9303994171962,1.03562886267751,1.64168241986767,2.16074473753218,2.84093682702252,2.55793501271625,0.617068451549513,2.09280550275367,1.07309360559848,1.63471479314037,1.48103864922132,3.2833492815819,3.72916523910936,3.50879969820798,9.00155472693308,4.42881181909227,3.99550902271842,1.64647379806855,15.5296828002385,4.49565963328025,0.426576501070468,1.85789337488351,2.44848176511977,1.81515172161008,1.33426826306922,2.66315876557583,9.96511029243474,2.47048432086016,4.02136334080431,7.36138946552258,6.23885078781184,0.898819408654221,5.61958929674205,6.17337947088538,0.379335801906163,1.48523066392647,2.25415471346161,1.4255592949172,0.387904974335251,1.54298803758701,1.70738650235495,2.06654207171443,2.82597710114475,1.35736880313981,6.52195779591728,2.8363667971736,2.75182593158484,7.42044970870017,9.73728582664814,10.8529721888588,10.4396599230382,14.9601991474422,20.1047681201044,12.3552635934637,31.629005436018,26.0498663367952,13.4176199439261,7.07220858251913,5.9201146462231,6.75420929908714,37.5048976038208,1.32643988239339,0.814824882210129,1.18821560042632,2.34690248288502,4.02015017860358,8.33152743101048,10.7323506321789,17.339865851681,15.9454576547118,11.0023790373666,26.0542670398023,24.6939524068231,18.370430439852,161.346673815021,262.162539600618,9.83528546038072,12.9690270763224,3.37156238974363,3.28192722458169,0,3.53459298086122,0,0,0,0,0,0,0,0,0,4.4984984299053,4.82596289708113,2.67098405500883,2.76907830901079,13.857490329693,9.2921596837974,1.94224508923985,1.209294227859,1.13163047853539,1.47650946440386,3.68922177532713,4.65170927702798,7.99774204850512,7.48644494607915,4.74055136903724,4.21674434299995,3.09406629744561,1.36175842301515,1.44048875225048,1.4229455216103,0.857348140126369,2.6601035046341,2.31879462882692,1.48094118541909,1.8267896946876,5.86679270159276,0.63549621259146,1.32317038832977,9.72828892354732,3.22928853391811,3.25689794612042,2.98430860007841,2.29797259643086,4.95517422270746,5.93360966433631,58.6087121136635,20.2259130603958,35.3721547276149,33.3412168898303,59.735377514088,53.5340925303263,18.1876920093425,21.9723780148143,18.9333964112061,2.86401185404534,0.632671987162271,2.84647253977588,2.37611749807963,1.88179466413022,1.9652630737156,4.45052343069908,4.46328660916814,4.4498510137285,3.49960427887841,14.9121435140862,0,0.598066184175915,0.496375471371293,1.55560950675238,1.93739735216597,2.02747350588934,1.64300134104056,1.0416350787516,1.15345278868282,0.241584120826006,1.15212002503146,41.0814456816632,10.7444364103787,14.5849559174055,16.2401028722244,16.6494826970758,19.6694541233452,29.8084714809523,29.8332844892646,29.8860691846517,25.6054870360799,28.8362889491364,42.7840096447513,36.752923506605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|phase1_expression=0.640595388419176,0.697950815278722,0.909998478779072,0.30246421130683,0,0.16787927191189,0.467225281191051,69.5974713350096,35.056391815765,36.982195158875,15.923271044972,11.0883301003518,119.669310221913,112.072955901155,24.3170126125434,46.56931149966,18.88817070946,194.482424943354,216.22946179625,152.780274647291,5.6128571499706,23.1347916298063,20.112383763698,15.359272588167,11.2410547722913,0.57423196411502,0,0.215471232685889,2.09025761402011,3.02436155711917,3.10422714917427,0,0,0,0,0,0,161.134677833709,90.6348999647608,156.533599448166,178.234140873397,165.297007359944,127.203712494162,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,131.877128361381,60.2050577869416,95.4506389564598,0.257259436035947,1.43266719969378,1.54701627683233,0.202316460859598,0,0,0,0,29.2467408116455,58.3431153914515,18.4724829885986,7.78960287347852,10.7581125490035,0.311068836925433,0.810035629990144,0.210324961351382,1.42825492201902,1.10434270475807,0.244981598429908,0.766763768145891,1.83843757322004,2.20231761998777,3.31987079021488,2.61131106535614,0.791317726381163,0.548925861614458,2.08365348222704,2.23346399201105,4.50210088025344,1.83357897332172,1.76777151284201,2.13557521198654,0.745597783301202,0.605809546665472,0.377857800533928,0.289864488701678,4.30211938490693,0,0,3.24888208723835,1.79210754838934,8.00533194750986,0,0,0,0,0,0,0,0,0.506719730950197,0,11.9893073705013,202.748362895735,10.3909497345377,1.38788261412909,2.43572382649713,2.99800146432876,2.71300752994721,3.64524992120685,1.75933227861546,0.741584903203122,12.1463459812726,63.6919597403909,6.47067399789637,25.3967746229453,34.4261429726008,11.1835056730873,1.17112318804619,2.30391377494801,9.19645398750929,26.5989576403143,16.197373736822,30.1156438163163,2.69623150928681,7.32000964509802,0.628271760564322,4.51943232499919,2.81287003063364,3.1168206683934,5.84068547043927,3.86989582631202,31.9725914467939,2.77995034277042,5.05060454127538,1.82168620147785,0.689706313300419,1.26043490863744,2.26057226753573,1.29269348387523,1.66547836370305,1.87403449119458,3.10444044886819,0.862271971731369,0.756424320671277,0.703804496655795,1.97276159184817,1.94633074457919,1.39300866608867,3.90986059175093,1.39323986772945,34.4084461783485,34.7419674604865,38.9303994171962,1.03562886267751,1.64168241986767,2.16074473753218,2.84093682702252,2.55793501271625,0.617068451549513,2.09280550275367,1.07309360559848,1.63471479314037,1.48103864922132,3.2833492815819,3.72916523910936,3.50879969820798,9.00155472693308,4.42881181909227,3.99550902271842,1.64647379806855,15.5296828002385,4.49565963328025,0.426576501070468,1.85789337488351,2.44848176511977,1.81515172161008,1.33426826306922,2.66315876557583,9.96511029243474,2.47048432086016,4.02136334080431,7.36138946552258,6.23885078781184,0.898819408654221,5.61958929674205,6.17337947088538,0.379335801906163,1.48523066392647,2.25415471346161,1.4255592949172,0.387904974335251,1.54298803758701,1.70738650235495,2.06654207171443,2.82597710114475,1.35736880313981,6.52195779591728,2.8363667971736,2.75182593158484,7.42044970870017,9.73728582664814,10.8529721888588,10.4396599230382,14.9601991474422,20.1047681201044,12.3552635934637,31.629005436018,26.0498663367952,13.4176199439261,7.07220858251913,5.9201146462231,6.75420929908714,37.5048976038208,1.32643988239339,0.814824882210129,1.18821560042632,2.34690248288502,4.02015017860358,8.33152743101048,10.7323506321789,17.339865851681,15.9454576547118,11.0023790373666,26.0542670398023,24.6939524068231,18.370430439852,161.346673815021,262.162539600618,9.83528546038072,12.9690270763224,3.37156238974363,3.28192722458169,0,3.53459298086122,0,0,0,0,0,0,0,0,0,4.4984984299053,4.82596289708113,2.67098405500883,2.76907830901079,13.857490329693,9.2921596837974,1.94224508923985,1.209294227859,1.13163047853539,1.47650946440386,3.68922177532713,4.65170927702798,7.99774204850512,7.48644494607915,4.74055136903724,4.21674434299995,3.09406629744561,1.36175842301515,1.44048875225048,1.4229455216103,0.857348140126369,2.6601035046341,2.31879462882692,1.48094118541909,1.8267896946876,5.86679270159276,0.63549621259146,1.32317038832977,9.72828892354732,3.22928853391811,3.25689794612042,2.98430860007841,2.29797259643086,4.95517422270746,5.93360966433631,58.6087121136635,20.2259130603958,35.3721547276149,33.3412168898303,59.735377514088,53.5340925303263,18.1876920093425,21.9723780148143,18.9333964112061,2.86401185404534,0.632671987162271,2.84647253977588,2.37611749807963,1.88179466413022,1.9652630737156,4.45052343069908,4.46328660916814,4.4498510137285,3.49960427887841,14.9121435140862,0,0.598066184175915,0.496375471371293,1.55560950675238,1.93739735216597,2.02747350588934,1.64300134104056,1.0416350787516,1.15345278868282,0.241584120826006,1.15212002503146,41.0814456816632,10.7444364103787,14.5849559174055,16.2401028722244,16.6494826970758,19.6694541233452,29.8084714809523,29.8332844892646,29.8860691846517,25.6054870360799,28.8362889491364,42.7840096447513,36.752923506605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| ||
|short_description=p2@Akap13 | |||
}} | }} |
Latest revision as of 02:31, 27 September 2015
Short description: | p2@Akap13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Akap13_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_ENSMUST00000094307, ENSMUST00000132656, uc009hwv.1, uc009hww.2_5end |
EntrezGene: | Akap13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.16e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.16e-10 | 32 |
hematopoietic stem cell | 1.16e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.16e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 6.72e-09 | 25 |
leukocyte | 9.03e-08 | 17 |
nongranular leukocyte | 9.03e-08 | 17 |
lymphoid lineage restricted progenitor cell | 2.27e-07 | 12 |
T cell | 9.74e-07 | 11 |
pro-T cell | 9.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.26e-19 | 48 |
immune system | 2.26e-19 | 48 |
hematopoietic system | 5.11e-18 | 45 |
blood island | 5.11e-18 | 45 |
hemopoietic organ | 7.26e-10 | 29 |
immune organ | 7.26e-10 | 29 |
bone marrow | 3.27e-09 | 16 |
bone element | 1.84e-08 | 22 |
skeletal element | 1.84e-08 | 22 |
skeletal system | 1.84e-08 | 22 |
foregut | 2.66e-08 | 80 |
mixed endoderm/mesoderm-derived structure | 7.27e-08 | 35 |
lateral plate mesoderm | 1.11e-07 | 87 |
gland of gut | 3.17e-07 | 24 |
thymus | 6.24e-07 | 23 |
neck | 6.24e-07 | 23 |
respiratory system epithelium | 6.24e-07 | 23 |
hemolymphoid system gland | 6.24e-07 | 23 |
pharyngeal epithelium | 6.24e-07 | 23 |
thymic region | 6.24e-07 | 23 |
pharyngeal gland | 6.24e-07 | 23 |
entire pharyngeal arch endoderm | 6.24e-07 | 23 |
thymus primordium | 6.24e-07 | 23 |
early pharyngeal endoderm | 6.24e-07 | 23 |