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FFCP PHASE1:Mm9::chr8:98201645..98201708,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:98201645..98201708,+
|DHSsupport=NA
|short_description=p2@Ndrg4
|DPIdataset=NA
|description=CAGE_peak_2_at_Ndrg4_5end
|association_with_transcript=-276bp_to_ENSMUST00000041318,uc009mys.2_5end
|EntrezGene=234593
|EntrezGene=234593
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q8BTG7
|UniProt=Q8BTG7
|association_with_transcript=-276bp_to_ENSMUST00000041318,uc009mys.2_5end
|cluster_id=chr8:98201645..98201708,+
|description=CAGE_peak_2_at_Ndrg4_5end
|id=chr8:98201645..98201708,+
|ontology_enrichment_celltype=CL:0000117!1.94e-16!23;CL:0000337!1.94e-16!23;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000221!2.69e-09!44;CL:0000133!2.69e-09!44;CL:0002319!3.54e-09!43;CL:0000393!1.66e-08!39;CL:0000211!1.66e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-20,23;CL:0000337,2.61e-20,23;CL:0000540,2.61e-12,33;CL:0000047,2.61e-12,33;CL:0000031,2.61e-12,33;CL:0000404,2.61e-12,33;CL:0000221,7.06e-09,44;CL:0000133,7.06e-09,44;CL:0000393,7.93e-09,39;CL:0000211,7.93e-09,39;CL:0002319,1.00e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.55e-22!75;UBERON:0001016!5.55e-22!75;UBERON:0001017!9.08e-22!73;UBERON:0005743!9.08e-22!73;UBERON:0002346!3.53e-21!71;UBERON:0003075!3.53e-21!71;UBERON:0007284!3.53e-21!71;UBERON:0001049!1.49e-20!52;UBERON:0005068!1.49e-20!52;UBERON:0006241!1.49e-20!52;UBERON:0007135!1.49e-20!52;UBERON:0004121!1.79e-20!102;UBERON:0000924!1.79e-20!102;UBERON:0006601!1.79e-20!102;UBERON:0000033!1.32e-19!63;UBERON:0000955!6.40e-19!50;UBERON:0006238!6.40e-19!50;UBERON:0002020!1.06e-18!34;UBERON:0002616!3.00e-18!49;UBERON:0003056!4.99e-18!49;UBERON:0003080!1.66e-16!40;UBERON:0002780!6.18e-16!39;UBERON:0001890!6.18e-16!39;UBERON:0006240!6.18e-16!39;UBERON:0002791!5.53e-15!29;UBERON:0003528!5.53e-15!29;UBERON:0001893!5.53e-15!29;UBERON:0000956!6.89e-10!21;UBERON:0001869!6.89e-10!21;UBERON:0000203!6.89e-10!21;UBERON:0007811!1.93e-08!86;UBERON:0000153!4.60e-08!94;UBERON:0002619!9.59e-08!17;UBERON:0000468!1.64e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.19e-25,54;UBERON:0001049,6.72e-24,52;UBERON:0005068,6.72e-24,52;UBERON:0006241,6.72e-24,52;UBERON:0007135,6.72e-24,52;UBERON:0002020,9.66e-23,34;UBERON:0002346,1.85e-22,64;UBERON:0003075,1.85e-22,64;UBERON:0007284,1.85e-22,64;UBERON:0001016,1.97e-22,75;UBERON:0001017,3.84e-22,73;UBERON:0010314,5.52e-20,92;UBERON:0000955,1.61e-19,47;UBERON:0006238,1.61e-19,47;UBERON:0004121,8.24e-19,95;UBERON:0000924,8.24e-19,95;UBERON:0006601,8.24e-19,95;UBERON:0003056,9.55e-19,49;UBERON:0002616,1.03e-18,46;UBERON:0010371,1.66e-18,73;UBERON:0003080,3.79e-18,40;UBERON:0003528,4.52e-18,29;UBERON:0002791,4.52e-18,29;UBERON:0001893,4.52e-18,29;UBERON:0002780,1.91e-17,39;UBERON:0001890,1.91e-17,39;UBERON:0006240,1.91e-17,39;UBERON:0000956,1.11e-11,21;UBERON:0001869,1.11e-11,21;UBERON:0000203,1.11e-11,21;UBERON:0002619,5.29e-09,17;UBERON:0002420,8.34e-08,8;UBERON:0007245,8.34e-08,8;UBERON:0010009,8.34e-08,8;UBERON:0010011,8.34e-08,8;UBERON:0000454,8.34e-08,8;UBERON:0002021,2.89e-07,10;UBERON:0000411,2.89e-07,10;UBERON:0001950,2.89e-07,10
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,55.6370267363894,68.2398363260922,71.6229485961982,0,0,0.449949858640699,0,0,0.599200221036809,1.92109152660777,26.0260926894279,30.7813539396255,26.0802952075714,95.978730759678,76.8622522511615,35.3998409731217,26.2616590589968,61.5876587028714,37.4393995397922,36.9016407066192,34.715076515911,40.7528629086299,40.8034890466747,41.152156273984,41.3190838522044,48.3975844627245,36.977175961988,86.031546958311,76.7383359507165,65.4262054846805,1.4387976733305,2.11600368298999,0,0,0,0,0.649776417447669,0,2.38755514223978,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0,0.68510327831436,0.258937883647172,4.60170631100957,0.173485326766136,0.608930956624282,1.61430848079241,1.20578112442098,3.88042733547826,2.76466500925286,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,5.27005434620785,6.49284791121711,0,0,0,0,25.6141993382247,17.3850229071078,78.0313526620888,19.468323861535,15.5986428971502,29.298114282898,24.0117069340281,0.916554274652847,1.36847667671102,6.82351447770922,0.841767423545896,0.780722657776222,3.44853156650209,3.96136685571768,5.27466862425003,6.05524842446818,6.53379973452734,7.40243624021858,3.88055056108524,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,2.48550927042602,3.51789089971644,3.78130329068131,3.07768156260773,3.93528463494808,4.01094493507183,2.79040733700489,2.41446061259657,2.10177616260905,4.27855609775049,0.985004784474571,0.56748166682099,0.584799949701329,0.878200461164203,0.268412837520744,22.5010244963616,47.6448355316087,0,0,0.426576501070468,0,0.644337306610467,1.00841762311671,0.667134131534611,0.951128130562796,0,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.49095073923223,0.505892296994058,1.18088118383682,0.627994911365499,0.863780147452604,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,32.1101179975584,27.3103229759833,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,41.1291285019913,0.425820255624806,1.6025904330053,2.11753047159649,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.258428293168221,0,1.06949213515416,0,0,0,1.36175842301515,0.720244376125241,0.388076051348264,0.643011105094777,2.12808280370728,3.38900753443934,5.92376474167636,4.87143918583359,3.28540391289194,3.1774810629573,0.882113592219848,0.16488625294148,0.322928853391811,0.361877549568935,0.119372344003136,0,0,22.2510362412612,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.909188012978695,0.26175594198403,0,0,3.38215763210514,0.598066184175915,0.496375471371293,13.0282296190512,7.23295011475294,5.57555214119568,4.10750335260139,5.208175393758,10.3810750981454,7.24752362478018,5.47257011889944,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0,0,0,0,0,0.233753804363138,0.226730383615211,0.221985953374065,0.0897138566094757,1.17519231454855,4.056981474676,0.375364950902364,0,0.214368379079066,0,24.8490810751509,21.1749608793301,20.0513429703789,31.4491323688948,10.2762377965596,7.55393897389701,15.5255175053315,15.7612421128477,8.15656336171568,15.5328093525546,0.830298780673413,6.3843979744165,3.92687293234509,8.75184181445858,6.07878171621149,10.6629234901008,6.66740183404846,6.38708677440572,5.45562656306086,7.83361356467772,7.35089969681695,8.29955902098735,8.14681114987977,8.64339557465735,7.63891737109657,8.57328644309533,8.45955579397445,7.33055037762079,9.47797571847605,6.03515572551029,5.48590803816665,7.27650805253284,7.62995807831427,8.43009216467505,6.11710972699649,6.34609559187574,8.41468675214754,7.3659519202596,4.88894809845102,6.73370725989286,6.8808310512021,7.68334962529395,9.41231399290286,7.7468420592983,7.9091710502268,18.2361721894701,5.6143586026898,7.73535794573874,5.35607329792761,2.8676884485537,1.62307484934295
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,55.6370267363894,68.2398363260922,71.6229485961982,0,0,0.449949858640699,0,0,0.599200221036809,1.92109152660777,26.0260926894279,30.7813539396255,26.0802952075714,95.978730759678,76.8622522511615,35.3998409731217,26.2616590589968,61.5876587028714,37.4393995397922,36.9016407066192,34.715076515911,40.7528629086299,40.8034890466747,41.152156273984,41.3190838522044,48.3975844627245,36.977175961988,86.031546958311,76.7383359507165,65.4262054846805,1.4387976733305,2.11600368298999,0,0,0,0,0.649776417447669,0,2.38755514223978,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0,0.68510327831436,0.258937883647172,4.60170631100957,0.173485326766136,0.608930956624282,1.61430848079241,1.20578112442098,3.88042733547826,2.76466500925286,0.247194967734374,0.144599356919912,0,0.647067399789637,0,0,0,5.27005434620785,6.49284791121711,0,0,0,0,25.6141993382247,17.3850229071078,78.0313526620888,19.468323861535,15.5986428971502,29.298114282898,24.0117069340281,0.916554274652847,1.36847667671102,6.82351447770922,0.841767423545896,0.780722657776222,3.44853156650209,3.96136685571768,5.27466862425003,6.05524842446818,6.53379973452734,7.40243624021858,3.88055056108524,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,2.48550927042602,3.51789089971644,3.78130329068131,3.07768156260773,3.93528463494808,4.01094493507183,2.79040733700489,2.41446061259657,2.10177616260905,4.27855609775049,0.985004784474571,0.56748166682099,0.584799949701329,0.878200461164203,0.268412837520744,22.5010244963616,47.6448355316087,0,0,0.426576501070468,0,0.644337306610467,1.00841762311671,0.667134131534611,0.951128130562796,0,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.49095073923223,0.505892296994058,1.18088118383682,0.627994911365499,0.863780147452604,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0,32.1101179975584,27.3103229759833,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,1.16902343164525,0.395287777946524,41.1291285019913,0.425820255624806,1.6025904330053,2.11753047159649,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.258428293168221,0,1.06949213515416,0,0,0,1.36175842301515,0.720244376125241,0.388076051348264,0.643011105094777,2.12808280370728,3.38900753443934,5.92376474167636,4.87143918583359,3.28540391289194,3.1774810629573,0.882113592219848,0.16488625294148,0.322928853391811,0.361877549568935,0.119372344003136,0,0,22.2510362412612,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.909188012978695,0.26175594198403,0,0,3.38215763210514,0.598066184175915,0.496375471371293,13.0282296190512,7.23295011475294,5.57555214119568,4.10750335260139,5.208175393758,10.3810750981454,7.24752362478018,5.47257011889944,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0,0,0,0,0,0.233753804363138,0.226730383615211,0.221985953374065,0.0897138566094757,1.17519231454855,4.056981474676,0.375364950902364,0,0.214368379079066,0,24.8490810751509,21.1749608793301,20.0513429703789,31.4491323688948,10.2762377965596,7.55393897389701,15.5255175053315,15.7612421128477,8.15656336171568,15.5328093525546,0.830298780673413,6.3843979744165,3.92687293234509,8.75184181445858,6.07878171621149,10.6629234901008,6.66740183404846,6.38708677440572,5.45562656306086,7.83361356467772,7.35089969681695,8.29955902098735,8.14681114987977,8.64339557465735,7.63891737109657,8.57328644309533,8.45955579397445,7.33055037762079,9.47797571847605,6.03515572551029,5.48590803816665,7.27650805253284,7.62995807831427,8.43009216467505,6.11710972699649,6.34609559187574,8.41468675214754,7.3659519202596,4.88894809845102,6.73370725989286,6.8808310512021,7.68334962529395,9.41231399290286,7.7468420592983,7.9091710502268,18.2361721894701,5.6143586026898,7.73535794573874,5.35607329792761,2.8676884485537,1.62307484934295
|short_description=p2@Ndrg4
}}
}}

Latest revision as of 01:06, 26 September 2015

Short description:p2@Ndrg4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ndrg4_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -276bp_to_ENSMUST00000041318, uc009mys.2_5end
EntrezGene:Ndrg4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ndrg4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C355.64
Mouse Granule cells, donor2.CNhs12357.11731-123E368.24
Mouse Granule cells, donor3.CNhs12108.11636-122C771.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F195.98
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D576.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D661.59
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F440.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D841.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E441.32
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D686.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E165.43
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C13.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A425.61
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F178.03
cortex, adult.CNhs10473.12-14D519.47
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F229.30
diencephalon, neonate N30.CNhs11201.1388-42B224.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G87.40
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E822.50
hippocampus, neonate N00.CNhs11228.627-43G147.64
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C232.11
medulla oblongata, neonate N30.CNhs11200.1396-42A327.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I941.13
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C922.25
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G513.03
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I45.21
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F97.91
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.61e-2023
neuroblast (sensu Vertebrata)2.61e-2023
neuron2.61e-1233
neuronal stem cell2.61e-1233
neuroblast2.61e-1233
electrically signaling cell2.61e-1233
ectodermal cell7.06e-0944
neurectodermal cell7.06e-0944
electrically responsive cell7.93e-0939
electrically active cell7.93e-0939
neural cell1.00e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.19e-2554
neural tube6.72e-2452
neural rod6.72e-2452
future spinal cord6.72e-2452
neural keel6.72e-2452
gray matter9.66e-2334
neurectoderm1.85e-2264
neural plate1.85e-2264
presumptive neural plate1.85e-2264
nervous system1.97e-2275
central nervous system3.84e-2273
structure with developmental contribution from neural crest5.52e-2092
brain1.61e-1947
future brain1.61e-1947
ectoderm-derived structure8.24e-1995
ectoderm8.24e-1995
presumptive ectoderm8.24e-1995
pre-chordal neural plate9.55e-1949
regional part of brain1.03e-1846
ecto-epithelium1.66e-1873
anterior neural tube3.79e-1840
brain grey matter4.52e-1829
regional part of telencephalon4.52e-1829
telencephalon4.52e-1829
regional part of forebrain1.91e-1739
forebrain1.91e-1739
future forebrain1.91e-1739
cerebral cortex1.11e-1121
cerebral hemisphere1.11e-1121
pallium1.11e-1121
regional part of cerebral cortex5.29e-0917
basal ganglion8.34e-088
nuclear complex of neuraxis8.34e-088
aggregate regional part of brain8.34e-088
collection of basal ganglia8.34e-088
cerebral subcortex8.34e-088
occipital lobe2.89e-0710
visual cortex2.89e-0710
neocortex2.89e-0710
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