FFCP PHASE1:Mm9::chr9:106331730..106331788,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:106331730..106331788,+ to FFCP PHASE1:Mm9::chr9:106331730..106331788,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100503125,19944,545718,622707,628503,665032,666642 | |EntrezGene=100503125,19944,545718,622707,628503,665032,666642 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=642 | |||
|TSSclassifier=NA | |||
|UniProt=P47915 | |UniProt=P47915 | ||
|association_with_transcript=0bp_to_ENSMUST00000150576_5end | |||
|cluster_id=chr9:106331730..106331788,+ | |||
|description=CAGE_peak_2_at_Gm10913_5end,CAGE_peak_2_at_Gm13141_5end,CAGE_peak_2_at_Gm13841_5end,CAGE_peak_2_at_Gm6344_5end,CAGE_peak_2_at_Gm6887_5end,CAGE_peak_2_at_Gm8210_5end,CAGE_peak_2_at_Rpl29_5end | |||
|id=chr9:106331730..106331788,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.23e-13!54;CL:0000034!1.22e-12!97;CL:0002371!3.15e-12!118;CL:0000144!3.64e-12!121;CL:0000012!3.64e-12!121;CL:0000548!1.94e-11!115;CL:0000004!1.94e-11!115;CL:0000255!1.94e-11!115;CL:0002320!2.05e-11!46;CL:0000134!2.05e-11!46;CL:0000988!2.06e-11!32;CL:0002032!2.06e-11!32;CL:0000037!2.06e-11!32;CL:0000566!2.06e-11!32;CL:0000837!2.06e-11!32;CL:0000723!3.28e-11!91;CL:0000048!3.28e-11!91;CL:0002031!1.49e-08!25;CL:0000063!8.52e-08!66;CL:0000049!1.74e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.13e-13,54;CL:0000034,1.15e-12,97;CL:0000988,1.87e-11,32;CL:0002032,1.87e-11,32;CL:0000037,1.87e-11,32;CL:0000837,1.87e-11,32;CL:0002320,1.89e-11,46;CL:0000134,1.89e-11,46;CL:0000723,3.09e-11,91;CL:0000048,3.09e-11,91;CL:0002031,1.36e-08,25;CL:0000049,1.58e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.05e-11!46;UBERON:0002193!1.12e-10!48;UBERON:0002390!3.09e-10!45;UBERON:0003061!3.09e-10!45;UBERON:0002405!8.01e-09!70;UBERON:0000072!1.68e-07!27;UBERON:0004177!2.21e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.89e-11,46;UBERON:0002193,9.64e-11,48;UBERON:0002405,9.64e-11,48;UBERON:0002390,2.65e-10,45;UBERON:0003061,2.65e-10,45;UBERON:0000072,1.55e-07,27;UBERON:0004177,2.04e-07,29;UBERON:0005057,2.04e-07,29 | |||
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| |phase1_expression=2.88267924788629,1.39590163055744,1.36499771816861,2.11724947914781,0.500895729946347,1.6787927191189,5.37309073369709,10.0716192284429,7.74337971834167,6.78787126333781,13.6974374580404,19.3048624768714,6.67682846731702,10.4030278878607,16.6554880907831,16.6029719259657,11.8925519281785,13.249410945046,11.7918412900935,9.76096199135469,3.82694805679814,8.24114894967348,9.92559198727954,6.07971206614945,5.96464130774642,1.72269589234506,3.01533397311352,5.38678081714723,3.99049180858385,2.52030129759931,6.87364583031445,43.1820857952549,62.1215435460416,31.6963362030877,8.37669697278696,11.3039558843775,5.51257261908397,8.37063261473815,8.5946887897618,9.42342739152837,8.2352408324342,9.56263678941824,4.85510353031154,2.14024590558481,3.14268486780495,3.12029478674859,8.60630478782843,17.2239873540553,2.85592037554813,5.44403717407994,9.65906309215001,18.6878333674463,9.2280433331755,8.70434570413613,14.7881271622684,15.1783067261209,10.3152038377952,2.57836046138721,6.06949382578793,3.70293685490423,6.97214543856797,22.0248945844936,25.789549087223,3.5995988691256,5.93319817540185,4.2628806896766,8.68840320503374,6.53171119046643,10.2652716185393,13.7706057098324,10.3059231062177,7.7125765789027,7.06779331045163,8.45186514583183,12.0765293482978,10.1114066527102,3.30347642998166,1.27687338085188,1.68967186581868,5.93488294785872,4.48289453651807,3.64639359389732,2.51264699101243,1.12552522006336,0.61119299110724,5.00868595305235,4.12877874317399,3.54158947068071,29.4574892066086,12.5448789777264,1.73918693221007,3.44169550792555,7.47968467078526,10.7940638327563,5.19821133958135,2.24013443548668,2.10666630197628,8.35108580632483,11.4305842025262,12.0135455333516,1.83096445709685,7.69958864485907,5.09610479413291,0,26.8448890853906,30.4031838570118,21.7375511356357,5.1382745873577,11.9111426477699,1.03909497345377,9.1947223186052,6.08930956624282,4.61230994512117,2.71300752994721,2.58695155698551,1.38233250462643,2.71914464507811,1.87979163995885,5.30766331169925,3.07357014900077,3.97514733228708,6.30337829075789,3.72783522436244,0.585561594023094,1.04723353406728,3.0654846625031,8.98613433794402,14.3976655438418,9.91147771169905,0.449371918214468,1.37250180845588,3.64397621127307,1.91206752211504,1.27857728665165,0.41557608911912,0.811206315338788,3.36069900706044,3.6078021476927,1.0108910337347,1.26265113531884,8.58794923553845,8.04657365517155,8.64298223065676,4.52114453507145,4.150226448231,4.99643509110914,6.27801554550183,1.29351685369508,15.3053274982318,9.26619792822314,5.27853372491847,6.35667624039967,4.44875598760957,2.78601733217733,2.88094990971121,7.56330213910274,11.937624184325,13.1247432628505,9.94572247884574,8.07790512888457,7.03578179943289,4.32148947506436,6.39210786080068,2.95146347621106,3.5481435964097,2.32533944750408,2.68273401399619,2.10177616260905,2.13927804887525,1.47750717671186,1.29710095273369,1.46199987425332,2.41505126820156,0.805238512562231,0.630869845692382,5.04232600658494,0.991256348951394,5.28901133327089,11.9441420299731,6.27039014023184,7.34544529535932,6.05050573870028,4.00280478920767,2.28270751335071,2.84717436926707,2.9645811850322,1.75934646160189,0.596869416123452,1.75467678407208,3.59527763461689,3.02593269824572,3.38540164532424,16.5011073829181,9.71112357182695,6.76246414038483,5.29493452397817,3.87904974335251,3.29638353484497,1.51767689098217,1.03327103585722,1.56998727841375,1.48076596706161,2.66807364378434,18.3529616287703,22.4077254429051,14.8408994174003,10.1430060694251,8.68237775108701,4.07401362850272,4.89083433666378,2.7562988551756,7.13859674289012,4.31304619582064,1.11642284300551,2.18426371180192,2.27320990152401,5.38192240565737,3.37710464954357,1.29327233116623,11.3694847062291,9.12603868075345,7.46878377410828,7.51008794523207,5.52770649557992,3.57065461329021,1.95133647857799,2.04925687338048,3.98636441367795,1.91345722388985,2.29408640602033,1.72684981865896,1.01254341007058,0,8.15858525728064,6.39293554924747,2.20749397043786,0.80275294993896,1.05490517932983,11.3115112309906,2.01976741763498,6.94118082715765,13.2749173060857,6.24727853425117,8.36390792833932,7.5751549188014,5.09537755419898,7.69140333182299,7.59865230569411,7.11518000303742,1.28528526568723,2.55492153374884,3.5613120733451,3.25773918707152,2.3095817216155,2.65490276679926,10.9251286269742,8.46505959501303,8.67583366877131,4.72483028609236,3.99665692327106,1.55056975900933,2.18120237686503,2.49548164869305,2.84433082142234,1.05418608574999,1.03135543248187,0.340439605753788,8.10274923140896,10.6074120701859,4.07240366560025,2.6601035046341,3.0322698992352,3.29098041204242,3.04464949114599,9.62154003061212,0.63549621259146,1.54369878638473,2.80306630000516,3.22928853391811,5.48847616846218,3.81991500810037,2.79039529566604,4.37221254944776,1.11255181206306,8.03093139749908,7.63631411463923,13.519200497989,6.96963290917357,8.74843057414561,3.88922894451088,5.09935289981566,4.75834937900437,4.42239916174156,5.72802370809068,8.85740782027179,9.35269548783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| ||
|short_description=p2@Gm10913,p2@Gm13141,p2@Gm13841,p2@Gm6344,p2@Gm6887,p2@Gm8210,p2@Rpl29 | |||
}} | }} |
Latest revision as of 02:50, 26 September 2015
Short description: | p2@Gm10913, p2@Gm13141, p2@Gm13841, p2@Gm6344, p2@Gm6887, p2@Gm8210, p2@Rpl29 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm10913_5end, CAGE_peak_2_at_Gm13141_5end, CAGE_peak_2_at_Gm13841_5end, CAGE_peak_2_at_Gm6344_5end, CAGE_peak_2_at_Gm6887_5end, CAGE_peak_2_at_Gm8210_5end, CAGE_peak_2_at_Rpl29_5end |
Coexpression cluster: | MCL_coexpression_mm9:642 |
Association with transcript: | 0bp_to_ENSMUST00000150576_5end |
EntrezGene: | 100503125,19944,545718,622707,628503,665032,666642 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.13e-13 | 54 |
stem cell | 1.15e-12 | 97 |
hematopoietic cell | 1.87e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.87e-11 | 32 |
hematopoietic stem cell | 1.87e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.87e-11 | 32 |
connective tissue cell | 1.89e-11 | 46 |
mesenchymal cell | 1.89e-11 | 46 |
somatic stem cell | 3.09e-11 | 91 |
multi fate stem cell | 3.09e-11 | 91 |
hematopoietic lineage restricted progenitor cell | 1.36e-08 | 25 |
common myeloid progenitor | 1.58e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.89e-11 | 46 |
hemolymphoid system | 9.64e-11 | 48 |
immune system | 9.64e-11 | 48 |
hematopoietic system | 2.65e-10 | 45 |
blood island | 2.65e-10 | 45 |
segment of respiratory tract | 1.55e-07 | 27 |
hemopoietic organ | 2.04e-07 | 29 |
immune organ | 2.04e-07 | 29 |