FFCP PHASE1:Mm9::chr9:120954001..120954018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=209012 | |EntrezGene=209012 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENSMUST00000169176_5end | |||
|cluster_id=chr9:120954001..120954018,- | |||
|description=CAGE_peak_6_at_Ulk4_5end | |||
|id=chr9:120954001..120954018,- | |||
|ontology_enrichment_celltype=CL:0000117!2.93e-18!23;CL:0000337!2.93e-18!23;CL:0002609!7.05e-18!6;CL:0000540!7.50e-12!33;CL:0000047!7.50e-12!33;CL:0000031!7.50e-12!33;CL:0000404!7.50e-12!33;CL:0000393!1.36e-09!39;CL:0000211!1.36e-09!39;CL:0002608!1.52e-09!3;CL:0002613!7.75e-09!3;CL:0002319!1.93e-08!43;CL:0000221!3.47e-08!44;CL:0000133!3.47e-08!44;CL:0000055!7.07e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.11e-52,6;CL:0002608,2.82e-17,3;CL:0000117,5.91e-14,23;CL:0000337,5.91e-14,23;CL:0000540,8.00e-10,33;CL:0000047,8.00e-10,33;CL:0000031,8.00e-10,33;CL:0000404,8.00e-10,33;CL:0000393,2.37e-08,39;CL:0000211,2.37e-08,39;CL:0002319,1.35e-07,43;CL:0000221,1.99e-07,44;CL:0000133,1.99e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.15e-18!34;UBERON:0001049!2.93e-17!52;UBERON:0005068!2.93e-17!52;UBERON:0006241!2.93e-17!52;UBERON:0007135!2.93e-17!52;UBERON:0002791!1.87e-16!29;UBERON:0003528!1.87e-16!29;UBERON:0001893!1.87e-16!29;UBERON:0000955!3.25e-16!50;UBERON:0006238!3.25e-16!50;UBERON:0002616!1.27e-14!49;UBERON:0001017!8.45e-14!73;UBERON:0005743!8.45e-14!73;UBERON:0000073!2.68e-13!75;UBERON:0001016!2.68e-13!75;UBERON:0002780!2.73e-13!39;UBERON:0001890!2.73e-13!39;UBERON:0006240!2.73e-13!39;UBERON:0003080!7.14e-13!40;UBERON:0000956!4.65e-12!21;UBERON:0001869!4.65e-12!21;UBERON:0000203!4.65e-12!21;UBERON:0000033!5.70e-12!63;UBERON:0002346!2.02e-11!71;UBERON:0003075!2.02e-11!71;UBERON:0007284!2.02e-11!71;UBERON:0003056!6.91e-10!49;UBERON:0004121!1.78e-08!102;UBERON:0000924!1.78e-08!102;UBERON:0006601!1.78e-08!102;UBERON:0007811!1.24e-07!86;UBERON:0000025!5.55e-07!114;UBERON:0001954!9.32e-07!7;UBERON:0003022!9.32e-07!7;UBERON:0002421!9.32e-07!7;UBERON:0000349!9.32e-07!7;UBERON:0002600!9.32e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.01e-15,21;UBERON:0001869,3.01e-15,21;UBERON:0000203,3.01e-15,21;UBERON:0003528,3.88e-11,29;UBERON:0002791,3.88e-11,29;UBERON:0001893,3.88e-11,29;UBERON:0000955,8.06e-10,47;UBERON:0006238,8.06e-10,47;UBERON:0002020,1.53e-09,34;UBERON:0002780,2.37e-08,39;UBERON:0001890,2.37e-08,39;UBERON:0006240,2.37e-08,39;UBERON:0003080,3.78e-08,40;UBERON:0001954,5.68e-08,7;UBERON:0003022,5.68e-08,7;UBERON:0002421,5.68e-08,7;UBERON:0000349,5.68e-08,7;UBERON:0002600,5.68e-08,7;UBERON:0002616,4.10e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22137673850866,5.94026128659439,8.2026734927039,0.285650984403804,0.220868540951614,1.46988959057945,1.0543001812006,0.919218786610021,0,0,0.153606533256243,0.395658863190582,0.182975287204819,0.52091337055676,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22137673850866,5.94026128659439,8.2026734927039,0.285650984403804,0.220868540951614,1.46988959057945,1.0543001812006,0.919218786610021,0,0,0.153606533256243,0.395658863190582,0.182975287204819,0.52091337055676,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Ulk4 | |||
}} | }} |
Latest revision as of 08:18, 26 September 2015
Short description: | p6@Ulk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ulk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 31bp_to_ENSMUST00000169176_5end |
EntrezGene: | Ulk4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.11e-52 | 6 |
hippocampal neuron | 2.82e-17 | 3 |
CNS neuron (sensu Vertebrata) | 5.91e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.91e-14 | 23 |
neuron | 8.00e-10 | 33 |
neuronal stem cell | 8.00e-10 | 33 |
neuroblast | 8.00e-10 | 33 |
electrically signaling cell | 8.00e-10 | 33 |
electrically responsive cell | 2.37e-08 | 39 |
electrically active cell | 2.37e-08 | 39 |
neural cell | 1.35e-07 | 43 |
ectodermal cell | 1.99e-07 | 44 |
neurectodermal cell | 1.99e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 3.01e-15 | 21 |
cerebral hemisphere | 3.01e-15 | 21 |
pallium | 3.01e-15 | 21 |
brain grey matter | 3.88e-11 | 29 |
regional part of telencephalon | 3.88e-11 | 29 |
telencephalon | 3.88e-11 | 29 |
brain | 8.06e-10 | 47 |
future brain | 8.06e-10 | 47 |
gray matter | 1.53e-09 | 34 |
regional part of forebrain | 2.37e-08 | 39 |
forebrain | 2.37e-08 | 39 |
future forebrain | 2.37e-08 | 39 |
anterior neural tube | 3.78e-08 | 40 |
Ammon's horn | 5.68e-08 | 7 |
lobe parts of cerebral cortex | 5.68e-08 | 7 |
hippocampal formation | 5.68e-08 | 7 |
limbic system | 5.68e-08 | 7 |
limbic lobe | 5.68e-08 | 7 |
regional part of brain | 4.10e-07 | 46 |