FFCP PHASE1:Mm9::chr10:51953418..51953478,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66686 | |EntrezGene=66686 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D4J3 | |UniProt=Q9D4J3 | ||
|association_with_transcript=0bp_to_ENSMUST00000069004,ENSMUST00000105476,ENSMUST00000140921,NM_025705,uc007fbc.1,uc007fbd.2,uc007fbe.2_5end | |association_with_transcript=0bp_to_ENSMUST00000069004,ENSMUST00000105476,ENSMUST00000140921,NM_025705,uc007fbc.1,uc007fbd.2,uc007fbe.2_5end | ||
|cluster_id=chr10:51953418..51953478,+ | |||
|description=CAGE_peak_1_at_Dcbld1_5end | |description=CAGE_peak_1_at_Dcbld1_5end | ||
|id=chr10:51953418..51953478,+ | |id=chr10:51953418..51953478,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.42e-07!9;CL:0002251!5.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.33e-07,9;CL:0002251,5.33e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.07e-25!43;UBERON:0005409!5.35e-23!59;UBERON:0001007!2.88e-11!128;UBERON:0001555!2.88e-11!128;UBERON:0007026!2.88e-11!128;UBERON:0004119!1.23e-10!130;UBERON:0000925!1.23e-10!130;UBERON:0006595!1.23e-10!130;UBERON:0000344!1.27e-10!15;UBERON:0004921!2.15e-10!126;UBERON:0004185!2.15e-10!126;UBERON:0001242!1.74e-09!13;UBERON:0000060!1.74e-09!13;UBERON:0001262!1.74e-09!13;UBERON:0004786!1.74e-09!13;UBERON:0002108!1.15e-08!16;UBERON:0000485!1.54e-07!11;UBERON:0003350!5.42e-07!9;UBERON:0004808!5.42e-07!9;UBERON:0001277!5.42e-07!9;UBERON:0001045!6.62e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.15e-19,31;UBERON:0005409,3.28e-17,47;UBERON:0000344,1.24e-10,15;UBERON:0001242,1.70e-09,13;UBERON:0001262,1.70e-09,13;UBERON:0004786,1.70e-09,13;UBERON:0000485,1.51e-07,11;UBERON:0001007,2.93e-07,116;UBERON:0001555,2.93e-07,116;UBERON:0007026,2.93e-07,116;UBERON:0003350,5.33e-07,9;UBERON:0004808,5.33e-07,9;UBERON:0001277,5.33e-07,9;UBERON:0004119,9.12e-07,118;UBERON:0000925,9.12e-07,118;UBERON:0006595,9.12e-07,118 | |||
|phase1_expression=12.4916100741739,67.3522536743967,62.3348957963664,78.338230728469,88.1576484705571,32.5685787509066,32.4721570427781,0,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.666219523631325,0.607425802169478,0,1.73504190947031,3.70208970735495,3.81950686618227,7.99406927420056,0.0992909512008853,0,29.1186209484,30.7408436630008,52.2551087344668,37.0455316696804,33.3980410663128,34.9643091799728,31.5037662199913,31.9291935343639,0,0,0,26.5743490171173,24.7689621584154,27.5628630954198,0,0,0.523523743973798,0,0.683045484958446,0,5.91715044485213,6.2853697356099,7.70896359079063,1.56478268869608,3.48840250208714,2.85592037554813,4.6663175777828,3.21968769738334,4.31257693094915,4.02678254538567,0.725362142011344,0,2.31533492432352,1.14613375975503,1.03134418455488,4.85559506063035,6.34789175126439,4.43681982454325,3.38844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,1.79760066311043,1.53687322128622,5.91030790158323,6.75029691658453,6.52007380189284,7.9982275633065,7.50953039235486,8.57435594504678,7.57179221044067,5.51531271966013,12.1127469099328,5.61824287574826,3.99376986466233,7.12185953743047,7.41049913179518,10.4182674111352,3.90856198601933,6.75315132038016,4.43114918552749,11.1958862479994,10.2507610175354,11.3703661953433,4.01348824665875,4.91215140694106,37.6823835312181,12.0459342777394,8.15965600449301,1.61910957491345,4.54843492213368,5.37632264516803,6.31999890592883,7.32850387085648,8.83272415649754,7.77347063922748,20.4222958676187,6.41632387071589,12.7402619853323,7.11066703153331,2.59789249213457,3.29367825117628,3.53867111510348,10.1623652949963,3.10725460376606,3.11728492036132,5.72501578328248,5.1759131313064,6.91846491768175,7.68685466818375,9.8774513993992,3.89566433121994,7.41584903203122,2.16899035379867,1.76922110389975,6.30890714794896,4.19598885074748,4.84875253135222,26.0948465705371,5.5628351432194,5.65506108396329,29.6330184041966,0.479260498023681,0.599902730993408,0.508280908292259,4.04434726393021,5.94750783664214,8.04187853522332,7.30062144807561,6.13717097592793,5.194701113989,5.02947915510049,8.35082783572594,6.22034853050465,9.85618757891331,6.73413938836717,9.10843100738926,6.66716102857071,7.20248519221397,7.23383125611432,6.25935792192216,5.89323113310309,7.40243624021858,6.20888089773638,12.287375597172,10.5899404893979,10.9089696981648,5.47989331068937,8.61946472599353,6.96504333044333,6.1734640922383,9.15557627365069,1.40442637462647,0,0.284163499395593,5.79952163099405,5.15957331958412,4.32148947506436,3.31442629819294,4.9191057936851,4.9365476123961,7.44108623201305,6.9751084363901,6.07179780309281,5.59503489705834,7.88003827579657,8.10688095458557,7.60239934611728,4.83010253640311,6.30770168173747,6.09840850835969,9.05560588937703,41.3023478729747,34.6430242329243,13.4371597837197,17.6499870613933,22.6806731926884,26.4205417256579,26.9077433052293,29.4849720474467,31.7934471234823,29.1517149861499,35.1869292320377,34.0215567190368,31.5841821132975,26.9645822596266,24.6397376857151,27.2823544358483,12.7077493638565,13.1385789501188,20.2873924211545,17.7176655225423,12.8008641530633,16.0611027548829,17.453284246295,15.941895981797,17.1128613347099,13.3268937035545,8.59712618552732,4.50481785433454,5.11053387294328,4.49724224769707,3.85434230638156,7.47649195232492,7.63877555344259,6.32931502391783,12.1601420081277,9.60964946158285,14.3768206527355,11.5363693777236,11.2333562321242,9.09283960609602,8.25228102200796,13.0259750768109,8.86815312799702,7.95863929436036,13.5260930446881,15.1073126339917,14.7854856421756,21.1057884376688,16.1869675802489,17.9522956029175,17.0245955634686,17.9386398615508,19.9318460821859,16.3863314715738,13.9874835311375,15.0435020924772,0,0,4.42587845717133,3.03530420935206,4.17431533968259,7.85318300167761,4.09837363441689,4.54447668967871,5.36363973007636,6.24701990874622,4.73931475012158,9.79772071605463,7.12955757063661,4.81230102341015,8.09621403349789,6.72188473196017,5.53402889125133,3.85585579706168,3.69044221541498,8.19101776869374,10.2618784392753,3.13443233647817,18.5843193675948,19.1796702562435,25.0928552280743,18.483297816078,16.832207894204,17.2163682848599,28.9439688348408,24.3567598749929,20.3203505679291,18.0140952023415,22.1379078007497,16.5016869197099,3.40439605753788,8.8229936075342,8.66703181344455,4.71541477069503,7.27094957933322,6.0645397984704,5.59466670047211,5.48036908406279,4.4587624532105,2.54198485036584,2.8668691747145,15.0046490176747,11.6254387221052,14.9576053821827,19.5770644165144,18.2196398717018,21.8610627472388,5.00648315428376,1.36696704638282,4.74689796315412,6.11141940320049,1.50694765603753,2.46049609897845,3.43167259809784,0.679913719975421,0.419854356970974,0.967399816630967,10.5013767981662,20.8781755763549,19.9253077784312,16.6328224865574,13.1725626489115,19.4342681734098,13.4864346384821,16.7786515122432,17.799404054914,21.1272406465622,6.83473244395618,0.56369293868419,7.7748603942869,5.12921320417003,5.44463327363333,5.29555276258697,4.39285926276023,8.09764946655702,10.2861464026721,9.54220034273969,7.9722759872582,3.45636007509439,0,4.66267995167378,2.87590680061516,2.98817892848929,4.11761400035207,2.38417625737518,2.88469078847925,2.80610101631697,1.31256384932592,1.06689529317,0.705783295957884,0.584747284438515,0.192423683280659,0.233753804363138,5.21479882314986,4.21773311410723,1.88399098879899,2.18250001273302,3.86379188064381,1.31377732815827,2.38097111547445,5.14484109789758,6.01886524842436,3.3885110557024,4.14292712856459,2.86447756719698,4.98374228796694,4.7955776383945,5.2877572817279,4.05013500139084,1.35096360967266,3.17199686288943,2.07104124700728,4.98179268404048,6.3843979744165,8.70741389346084,7.53630822911712,3.5634237646757,1.83843508450014,13.3348036680969,7.62329711783909,6.4183841918363,10.1078884705519,7.35089969681695,12.0720858487089,9.36415074698824,9.98792377515961,9.24711050185374,10.9547548995107,8.45955579397445,10.6100071255038,4.94503080963968,8.68473628792944,7.20025430009372,8.87379030796687,9.77588378784016,9.44751708110135,10.4461412261017,10.4922113785679,10.426894453748,11.0489278803894,8.69146328613515,8.97827634652382,13.1684870117833,10.145961684683,9.41231399290286,11.3103894065755,7.71626443924566,9.242991383704,8.18760629558929,11.1732948105115,5.54736162999646,5.7353768971074,4.17362104116759 | |phase1_expression=12.4916100741739,67.3522536743967,62.3348957963664,78.338230728469,88.1576484705571,32.5685787509066,32.4721570427781,0,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0.666219523631325,0.607425802169478,0,1.73504190947031,3.70208970735495,3.81950686618227,7.99406927420056,0.0992909512008853,0,29.1186209484,30.7408436630008,52.2551087344668,37.0455316696804,33.3980410663128,34.9643091799728,31.5037662199913,31.9291935343639,0,0,0,26.5743490171173,24.7689621584154,27.5628630954198,0,0,0.523523743973798,0,0.683045484958446,0,5.91715044485213,6.2853697356099,7.70896359079063,1.56478268869608,3.48840250208714,2.85592037554813,4.6663175777828,3.21968769738334,4.31257693094915,4.02678254538567,0.725362142011344,0,2.31533492432352,1.14613375975503,1.03134418455488,4.85559506063035,6.34789175126439,4.43681982454325,3.38844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,1.79760066311043,1.53687322128622,5.91030790158323,6.75029691658453,6.52007380189284,7.9982275633065,7.50953039235486,8.57435594504678,7.57179221044067,5.51531271966013,12.1127469099328,5.61824287574826,3.99376986466233,7.12185953743047,7.41049913179518,10.4182674111352,3.90856198601933,6.75315132038016,4.43114918552749,11.1958862479994,10.2507610175354,11.3703661953433,4.01348824665875,4.91215140694106,37.6823835312181,12.0459342777394,8.15965600449301,1.61910957491345,4.54843492213368,5.37632264516803,6.31999890592883,7.32850387085648,8.83272415649754,7.77347063922748,20.4222958676187,6.41632387071589,12.7402619853323,7.11066703153331,2.59789249213457,3.29367825117628,3.53867111510348,10.1623652949963,3.10725460376606,3.11728492036132,5.72501578328248,5.1759131313064,6.91846491768175,7.68685466818375,9.8774513993992,3.89566433121994,7.41584903203122,2.16899035379867,1.76922110389975,6.30890714794896,4.19598885074748,4.84875253135222,26.0948465705371,5.5628351432194,5.65506108396329,29.6330184041966,0.479260498023681,0.599902730993408,0.508280908292259,4.04434726393021,5.94750783664214,8.04187853522332,7.30062144807561,6.13717097592793,5.194701113989,5.02947915510049,8.35082783572594,6.22034853050465,9.85618757891331,6.73413938836717,9.10843100738926,6.66716102857071,7.20248519221397,7.23383125611432,6.25935792192216,5.89323113310309,7.40243624021858,6.20888089773638,12.287375597172,10.5899404893979,10.9089696981648,5.47989331068937,8.61946472599353,6.96504333044333,6.1734640922383,9.15557627365069,1.40442637462647,0,0.284163499395593,5.79952163099405,5.15957331958412,4.32148947506436,3.31442629819294,4.9191057936851,4.9365476123961,7.44108623201305,6.9751084363901,6.07179780309281,5.59503489705834,7.88003827579657,8.10688095458557,7.60239934611728,4.83010253640311,6.30770168173747,6.09840850835969,9.05560588937703,41.3023478729747,34.6430242329243,13.4371597837197,17.6499870613933,22.6806731926884,26.4205417256579,26.9077433052293,29.4849720474467,31.7934471234823,29.1517149861499,35.1869292320377,34.0215567190368,31.5841821132975,26.9645822596266,24.6397376857151,27.2823544358483,12.7077493638565,13.1385789501188,20.2873924211545,17.7176655225423,12.8008641530633,16.0611027548829,17.453284246295,15.941895981797,17.1128613347099,13.3268937035545,8.59712618552732,4.50481785433454,5.11053387294328,4.49724224769707,3.85434230638156,7.47649195232492,7.63877555344259,6.32931502391783,12.1601420081277,9.60964946158285,14.3768206527355,11.5363693777236,11.2333562321242,9.09283960609602,8.25228102200796,13.0259750768109,8.86815312799702,7.95863929436036,13.5260930446881,15.1073126339917,14.7854856421756,21.1057884376688,16.1869675802489,17.9522956029175,17.0245955634686,17.9386398615508,19.9318460821859,16.3863314715738,13.9874835311375,15.0435020924772,0,0,4.42587845717133,3.03530420935206,4.17431533968259,7.85318300167761,4.09837363441689,4.54447668967871,5.36363973007636,6.24701990874622,4.73931475012158,9.79772071605463,7.12955757063661,4.81230102341015,8.09621403349789,6.72188473196017,5.53402889125133,3.85585579706168,3.69044221541498,8.19101776869374,10.2618784392753,3.13443233647817,18.5843193675948,19.1796702562435,25.0928552280743,18.483297816078,16.832207894204,17.2163682848599,28.9439688348408,24.3567598749929,20.3203505679291,18.0140952023415,22.1379078007497,16.5016869197099,3.40439605753788,8.8229936075342,8.66703181344455,4.71541477069503,7.27094957933322,6.0645397984704,5.59466670047211,5.48036908406279,4.4587624532105,2.54198485036584,2.8668691747145,15.0046490176747,11.6254387221052,14.9576053821827,19.5770644165144,18.2196398717018,21.8610627472388,5.00648315428376,1.36696704638282,4.74689796315412,6.11141940320049,1.50694765603753,2.46049609897845,3.43167259809784,0.679913719975421,0.419854356970974,0.967399816630967,10.5013767981662,20.8781755763549,19.9253077784312,16.6328224865574,13.1725626489115,19.4342681734098,13.4864346384821,16.7786515122432,17.799404054914,21.1272406465622,6.83473244395618,0.56369293868419,7.7748603942869,5.12921320417003,5.44463327363333,5.29555276258697,4.39285926276023,8.09764946655702,10.2861464026721,9.54220034273969,7.9722759872582,3.45636007509439,0,4.66267995167378,2.87590680061516,2.98817892848929,4.11761400035207,2.38417625737518,2.88469078847925,2.80610101631697,1.31256384932592,1.06689529317,0.705783295957884,0.584747284438515,0.192423683280659,0.233753804363138,5.21479882314986,4.21773311410723,1.88399098879899,2.18250001273302,3.86379188064381,1.31377732815827,2.38097111547445,5.14484109789758,6.01886524842436,3.3885110557024,4.14292712856459,2.86447756719698,4.98374228796694,4.7955776383945,5.2877572817279,4.05013500139084,1.35096360967266,3.17199686288943,2.07104124700728,4.98179268404048,6.3843979744165,8.70741389346084,7.53630822911712,3.5634237646757,1.83843508450014,13.3348036680969,7.62329711783909,6.4183841918363,10.1078884705519,7.35089969681695,12.0720858487089,9.36415074698824,9.98792377515961,9.24711050185374,10.9547548995107,8.45955579397445,10.6100071255038,4.94503080963968,8.68473628792944,7.20025430009372,8.87379030796687,9.77588378784016,9.44751708110135,10.4461412261017,10.4922113785679,10.426894453748,11.0489278803894,8.69146328613515,8.97827634652382,13.1684870117833,10.145961684683,9.41231399290286,11.3103894065755,7.71626443924566,9.242991383704,8.18760629558929,11.1732948105115,5.54736162999646,5.7353768971074,4.17362104116759 | ||
|short_description=p1@Dcbld1 | |short_description=p1@Dcbld1 | ||
}} | }} |
Latest revision as of 01:57, 26 September 2015
Short description: | p1@Dcbld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dcbld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000069004, ENSMUST00000105476, ENSMUST00000140921, NM_025705, uc007fbc.1, uc007fbd.2, uc007fbe.2_5end |
EntrezGene: | Dcbld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.33e-07 | 9 |
epithelial cell of alimentary canal | 5.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.15e-19 | 31 |
gastrointestinal system | 3.28e-17 | 47 |
mucosa | 1.24e-10 | 15 |
intestinal mucosa | 1.70e-09 | 13 |
wall of intestine | 1.70e-09 | 13 |
gastrointestinal system mucosa | 1.70e-09 | 13 |
simple columnar epithelium | 1.51e-07 | 11 |
digestive system | 2.93e-07 | 116 |
digestive tract | 2.93e-07 | 116 |
primitive gut | 2.93e-07 | 116 |
epithelium of mucosa | 5.33e-07 | 9 |
gastrointestinal system epithelium | 5.33e-07 | 9 |
intestinal epithelium | 5.33e-07 | 9 |
endoderm-derived structure | 9.12e-07 | 118 |
endoderm | 9.12e-07 | 118 |
presumptive endoderm | 9.12e-07 | 118 |