FFCP PHASE1:Mm9::chr13:115246787..115246797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=815 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:115246787..115246797,- | |||
|description=CAGE_peak_at_chr13:115246787..115246797,- | |description=CAGE_peak_at_chr13:115246787..115246797,- | ||
|id=chr13:115246787..115246797,- | |id=chr13:115246787..115246797,- | ||
|ontology_enrichment_celltype=CL:0000192!2.05e-09!3;CL:0000359!2.05e-09!3;CL:0002539!2.05e-09!3;CL:0000514!2.05e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.66e-39,3;CL:0000359,2.66e-39,3;CL:0002539,2.66e-39,3;CL:0000514,2.66e-39,3;CL:0000680,2.48e-20,6;CL:0000187,2.48e-20,6;CL:0000056,2.48e-20,6;CL:0000222,1.31e-17,7;CL:0000355,5.71e-14,9;CL:0002293,5.71e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!1.91e-11!4;UBERON:0001637!1.91e-11!4;UBERON:0003509!1.91e-11!4;UBERON:0004573!1.91e-11!4;UBERON:0004571!1.91e-11!4;UBERON:0010191!1.91e-11!4;UBERON:0004572!1.91e-11!4;UBERON:0001135!2.05e-09!3;UBERON:0004237!2.05e-09!3;UBERON:0004695!2.05e-09!3;UBERON:0002111!2.05e-09!3;UBERON:0004178!2.05e-09!3;UBERON:0000055!3.80e-09!5;UBERON:0001981!3.80e-09!5;UBERON:0002049!3.80e-09!5;UBERON:0007500!3.80e-09!5;UBERON:0007798!3.80e-09!5;UBERON:0004537!3.80e-09!5;UBERON:0006965!3.80e-09!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.66e-39,3;UBERON:0004237,2.66e-39,3;UBERON:0004695,2.66e-39,3;UBERON:0002111,2.66e-39,3;UBERON:0004178,2.66e-39,3;UBERON:0000947,7.88e-30,4;UBERON:0001637,7.88e-30,4;UBERON:0004573,7.88e-30,4;UBERON:0003509,7.88e-30,4;UBERON:0004571,7.88e-30,4;UBERON:0010191,7.88e-30,4;UBERON:0004572,7.88e-30,4;UBERON:0000055,3.90e-24,5;UBERON:0007500,3.90e-24,5;UBERON:0001981,3.90e-24,5;UBERON:0002049,3.90e-24,5;UBERON:0007798,3.90e-24,5;UBERON:0004537,3.90e-24,5;UBERON:0006965,3.90e-24,5;UBERON:0001134,5.71e-14,9;UBERON:0002036,5.71e-14,9;UBERON:0002385,5.71e-14,9;UBERON:0000486,5.71e-14,9;UBERON:0007503,5.71e-14,9;UBERON:0001015,5.71e-14,9;UBERON:0002329,5.71e-14,9;UBERON:0003082,5.71e-14,9;UBERON:0003059,5.71e-14,9;UBERON:0007282,5.71e-14,9;UBERON:0004290,5.71e-14,9;UBERON:0009618,5.71e-14,9;UBERON:0000383,1.08e-12,10;UBERON:0007524,1.21e-11,11;UBERON:0003077,1.21e-11,11;UBERON:0007285,1.21e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.23029248682932,0.367093504323363,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,2.56652954828636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.23029248682932,0.367093504323363,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,2.56652954828636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr13:115246787..115246797,- | |short_description=p@chr13:115246787..115246797,- | ||
}} | }} |
Latest revision as of 15:29, 5 August 2015
Short description: | p@chr13:115246787..115246797, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:115246787..115246797, - |
Coexpression cluster: | MCL_coexpression_mm9:815 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.66e-39 | 3 |
vascular associated smooth muscle cell | 2.66e-39 | 3 |
aortic smooth muscle cell | 2.66e-39 | 3 |
smooth muscle myoblast | 2.66e-39 | 3 |
muscle precursor cell | 2.48e-20 | 6 |
muscle cell | 2.48e-20 | 6 |
myoblast | 2.48e-20 | 6 |
mesodermal cell | 1.31e-17 | 7 |
multi-potent skeletal muscle stem cell | 5.71e-14 | 9 |
epithelial cell of thymus | 5.71e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.66e-39 | 3 |
blood vessel smooth muscle | 2.66e-39 | 3 |
arterial system smooth muscle | 2.66e-39 | 3 |
artery smooth muscle tissue | 2.66e-39 | 3 |
aorta smooth muscle tissue | 2.66e-39 | 3 |
aorta | 7.88e-30 | 4 |
artery | 7.88e-30 | 4 |
systemic artery | 7.88e-30 | 4 |
arterial blood vessel | 7.88e-30 | 4 |
systemic arterial system | 7.88e-30 | 4 |
aortic system | 7.88e-30 | 4 |
arterial system | 7.88e-30 | 4 |
vessel | 3.90e-24 | 5 |
epithelial tube open at both ends | 3.90e-24 | 5 |
blood vessel | 3.90e-24 | 5 |
vasculature | 3.90e-24 | 5 |
vascular system | 3.90e-24 | 5 |
blood vasculature | 3.90e-24 | 5 |
vascular cord | 3.90e-24 | 5 |
skeletal muscle tissue | 5.71e-14 | 9 |
striated muscle tissue | 5.71e-14 | 9 |
muscle tissue | 5.71e-14 | 9 |
multilaminar epithelium | 5.71e-14 | 9 |
epithelial vesicle | 5.71e-14 | 9 |
musculature | 5.71e-14 | 9 |
somite | 5.71e-14 | 9 |
myotome | 5.71e-14 | 9 |
presomitic mesoderm | 5.71e-14 | 9 |
presumptive segmental plate | 5.71e-14 | 9 |
dermomyotome | 5.71e-14 | 9 |
trunk paraxial mesoderm | 5.71e-14 | 9 |
musculature of body | 1.08e-12 | 10 |
dense mesenchyme tissue | 1.21e-11 | 11 |
paraxial mesoderm | 1.21e-11 | 11 |
presumptive paraxial mesoderm | 1.21e-11 | 11 |