FFCP PHASE1:Mm9::chr11:94871166..94871204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217125 | |EntrezGene=217125 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=883 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K070 | |UniProt=Q8K070 | ||
|association_with_transcript=0bp_to_ENSMUST00000055947,ENSMUST00000128512,NM_146025,uc007kzt.1_5end | |association_with_transcript=0bp_to_ENSMUST00000055947,ENSMUST00000128512,NM_146025,uc007kzt.1_5end | ||
|cluster_id=chr11:94871166..94871204,+ | |||
|description=CAGE_peak_2_at_Samd14_5end | |description=CAGE_peak_2_at_Samd14_5end | ||
|id=chr11:94871166..94871204,+ | |id=chr11:94871166..94871204,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.17e-14!23;CL:0000337!4.17e-14!23;CL:0000540!3.22e-12!33;CL:0000047!3.22e-12!33;CL:0000031!3.22e-12!33;CL:0000404!3.22e-12!33;CL:0002319!4.02e-11!43;CL:0000221!8.49e-11!44;CL:0000133!8.49e-11!44;CL:0000393!1.84e-09!39;CL:0000211!1.84e-09!39;CL:0000055!2.85e-08!50 | |ontology_enrichment_celltype=CL:0000117!4.17e-14!23;CL:0000337!4.17e-14!23;CL:0000540!3.22e-12!33;CL:0000047!3.22e-12!33;CL:0000031!3.22e-12!33;CL:0000404!3.22e-12!33;CL:0002319!4.02e-11!43;CL:0000221!8.49e-11!44;CL:0000133!8.49e-11!44;CL:0000393!1.84e-09!39;CL:0000211!1.84e-09!39;CL:0000055!2.85e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-14,23;CL:0000337,3.35e-14,23;CL:0000540,2.68e-12,33;CL:0000047,2.68e-12,33;CL:0000031,2.68e-12,33;CL:0000404,2.68e-12,33;CL:0002319,4.22e-11,43;CL:0000221,8.91e-11,44;CL:0000133,8.91e-11,44;CL:0000393,2.13e-09,39;CL:0000211,2.13e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.07e-22!73;UBERON:0005743!4.07e-22!73;UBERON:0000073!1.03e-20!75;UBERON:0001016!1.03e-20!75;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!2.22e-18!52;UBERON:0005068!2.22e-18!52;UBERON:0006241!2.22e-18!52;UBERON:0007135!2.22e-18!52;UBERON:0000033!2.57e-18!63;UBERON:0003056!2.86e-17!49;UBERON:0004121!3.02e-17!102;UBERON:0000924!3.02e-17!102;UBERON:0006601!3.02e-17!102;UBERON:0000955!2.11e-16!50;UBERON:0006238!2.11e-16!50;UBERON:0002616!7.12e-16!49;UBERON:0003080!5.72e-14!40;UBERON:0000153!1.63e-13!94;UBERON:0002780!2.04e-13!39;UBERON:0001890!2.04e-13!39;UBERON:0006240!2.04e-13!39;UBERON:0002020!3.37e-13!34;UBERON:0007811!2.32e-12!86;UBERON:0002791!4.14e-10!29;UBERON:0003528!4.14e-10!29;UBERON:0001893!4.14e-10!29;UBERON:0000468!3.96e-09!333;UBERON:0000922!8.44e-08!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.83e-22,73;UBERON:0002346,2.77e-21,64;UBERON:0003075,2.77e-21,64;UBERON:0007284,2.77e-21,64;UBERON:0001016,9.37e-21,75;UBERON:0000073,2.79e-19,54;UBERON:0004121,1.38e-18,95;UBERON:0000924,1.38e-18,95;UBERON:0006601,1.38e-18,95;UBERON:0001049,1.65e-18,52;UBERON:0005068,1.65e-18,52;UBERON:0006241,1.65e-18,52;UBERON:0007135,1.65e-18,52;UBERON:0003056,2.17e-17,49;UBERON:0010371,4.03e-17,73;UBERON:0000955,2.24e-15,47;UBERON:0006238,2.24e-15,47;UBERON:0002616,7.46e-15,46;UBERON:0003080,4.60e-14,40;UBERON:0002780,1.65e-13,39;UBERON:0001890,1.65e-13,39;UBERON:0006240,1.65e-13,39;UBERON:0002020,2.75e-13,34;UBERON:0010314,3.04e-12,92;UBERON:0003528,3.56e-10,29;UBERON:0002791,3.56e-10,29;UBERON:0001893,3.56e-10,29;UBERON:0000922,5.68e-08,320 | |||
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| ||
|short_description=p2@Samd14 | |short_description=p2@Samd14 | ||
}} | }} |
Latest revision as of 00:30, 26 September 2015
Short description: | p2@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:883 |
Association with transcript: | 0bp_to_ENSMUST00000055947, ENSMUST00000128512, NM_146025, uc007kzt.1_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.35e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-14 | 23 |
neuron | 2.68e-12 | 33 |
neuronal stem cell | 2.68e-12 | 33 |
neuroblast | 2.68e-12 | 33 |
electrically signaling cell | 2.68e-12 | 33 |
neural cell | 4.22e-11 | 43 |
ectodermal cell | 8.91e-11 | 44 |
neurectodermal cell | 8.91e-11 | 44 |
electrically responsive cell | 2.13e-09 | 39 |
electrically active cell | 2.13e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.83e-22 | 73 |
neurectoderm | 2.77e-21 | 64 |
neural plate | 2.77e-21 | 64 |
presumptive neural plate | 2.77e-21 | 64 |
nervous system | 9.37e-21 | 75 |
regional part of nervous system | 2.79e-19 | 54 |
ectoderm-derived structure | 1.38e-18 | 95 |
ectoderm | 1.38e-18 | 95 |
presumptive ectoderm | 1.38e-18 | 95 |
neural tube | 1.65e-18 | 52 |
neural rod | 1.65e-18 | 52 |
future spinal cord | 1.65e-18 | 52 |
neural keel | 1.65e-18 | 52 |
pre-chordal neural plate | 2.17e-17 | 49 |
ecto-epithelium | 4.03e-17 | 73 |
brain | 2.24e-15 | 47 |
future brain | 2.24e-15 | 47 |
regional part of brain | 7.46e-15 | 46 |
anterior neural tube | 4.60e-14 | 40 |
regional part of forebrain | 1.65e-13 | 39 |
forebrain | 1.65e-13 | 39 |
future forebrain | 1.65e-13 | 39 |
gray matter | 2.75e-13 | 34 |
structure with developmental contribution from neural crest | 3.04e-12 | 92 |
brain grey matter | 3.56e-10 | 29 |
regional part of telencephalon | 3.56e-10 | 29 |
telencephalon | 3.56e-10 | 29 |
embryo | 5.68e-08 | 320 |