FFCP PHASE1:Hg19::chr11:102668160..102668174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102668160..102668174,+ | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102668160..102668174,+ | |description=CAGE_peak_at_chr11:102668160..102668174,+ | ||
|id=chr11:102668160..102668174,+ | |id=chr11:102668160..102668174,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.34e-30!32;CL:0000192!4.48e-29!42;CL:0000514!4.48e-29!42;CL:0000187!4.76e-23!54;CL:0000183!2.32e-22!59;CL:0000680!1.79e-21!57;CL:0000056!1.79e-21!57;CL:0000355!1.79e-21!57;CL:0000393!4.66e-20!60;CL:0000211!4.66e-20!60;CL:0000055!9.06e-19!180;CL:0000222!1.20e-14!119;CL:0002539!4.53e-13!10;CL:0002595!5.77e-10!5;CL:0002494!8.07e-10!16;CL:0002592!1.43e-09!3;CL:0000723!2.29e-08!436;CL:0000048!3.75e-08!430;CL:0000034!5.84e-08!444;CL:0000220!1.55e-07!246;CL:0002321!2.11e-07!248;CL:0000057!2.47e-07!75;CL:0002593!4.62e-07!2;CL:0002551!6.18e-07!6;CL:0002371!8.05e-07!591 | |ontology_enrichment_celltype=CL:0000359!1.34e-30!32;CL:0000192!4.48e-29!42;CL:0000514!4.48e-29!42;CL:0000187!4.76e-23!54;CL:0000183!2.32e-22!59;CL:0000680!1.79e-21!57;CL:0000056!1.79e-21!57;CL:0000355!1.79e-21!57;CL:0000393!4.66e-20!60;CL:0000211!4.66e-20!60;CL:0000055!9.06e-19!180;CL:0000222!1.20e-14!119;CL:0002539!4.53e-13!10;CL:0002595!5.77e-10!5;CL:0002494!8.07e-10!16;CL:0002592!1.43e-09!3;CL:0000723!2.29e-08!436;CL:0000048!3.75e-08!430;CL:0000034!5.84e-08!444;CL:0000220!1.55e-07!246;CL:0002321!2.11e-07!248;CL:0000057!2.47e-07!75;CL:0002593!4.62e-07!2;CL:0002551!6.18e-07!6;CL:0002371!8.05e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002595;2.24e-40;5!CL:0000359;5.47e-35;32!CL:0002593;5.59e-26;2!CL:0000192;1.50e-20;43!CL:0002592;9.93e-18;3!CL:0000569;1.52e-13;4!CL:0000187;1.61e-13;55!CL:0002494;7.64e-13;16!CL:0002539;8.73e-12;10!CL:0000393;3.47e-11;61!CL:0000211;3.47e-11;61!CL:0002589;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.42e-40,5;CL:0000359,7.06e-38,32;CL:0000192,6.36e-28,43;CL:0000514,6.36e-28,43;CL:0002593,3.59e-26,2;CL:0000187,1.36e-21,55;CL:0000680,2.03e-20,58;CL:0000056,2.03e-20,58;CL:0000355,2.03e-20,58;CL:0000393,2.33e-19,61;CL:0000211,2.33e-19,61;CL:0002592,7.72e-18,3;CL:0000569,2.08e-13,4;CL:0000011,2.08e-13,4;CL:0002494,8.13e-13,16;CL:0002539,9.07e-12,10;CL:0000222,3.84e-11,121;CL:0002589,1.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-20;43!CL:0000011;1.52e-13;4!CL:0000355;1.45e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.12e-07,2 | |||
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|short_description=p@chr11:102668160..102668174,+ | |short_description=p@chr11:102668160..102668174,+ | ||
}} | }} |
Latest revision as of 17:31, 23 July 2015
Short description: | p@chr11:102668160..102668174, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102668160..102668174, + |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.42e-40 | 5 |
vascular associated smooth muscle cell | 7.06e-38 | 32 |
smooth muscle cell | 6.36e-28 | 43 |
smooth muscle myoblast | 6.36e-28 | 43 |
smooth muscle cell of the internal thoracic artery | 3.59e-26 | 2 |
muscle cell | 1.36e-21 | 55 |
muscle precursor cell | 2.03e-20 | 58 |
myoblast | 2.03e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-20 | 58 |
electrically responsive cell | 2.33e-19 | 61 |
electrically active cell | 2.33e-19 | 61 |
smooth muscle cell of the coronary artery | 7.72e-18 | 3 |
cardiac mesenchymal cell | 2.08e-13 | 4 |
migratory trunk neural crest cell | 2.08e-13 | 4 |
cardiocyte | 8.13e-13 | 16 |
aortic smooth muscle cell | 9.07e-12 | 10 |
mesodermal cell | 3.84e-11 | 121 |
smooth muscle cell of the brachiocephalic vasculature | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.12e-07 | 2 |