FFCP PHASE1:Hg19::chr11:102668879..102668898,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |EntrezGene=4312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7155 | |HGNC=7155 | ||
|TSSclassifier=strong | |||
|UniProt=P03956 | |UniProt=P03956 | ||
|association_with_transcript=0bp_to_ENST00000315274_5end | |association_with_transcript=0bp_to_ENST00000315274_5end | ||
|cluster_id=chr11:102668879..102668898,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_1_at_MMP1_5end | |description=CAGE_peak_1_at_MMP1_5end | ||
|id=chr11:102668879..102668898,- | |id=chr11:102668879..102668898,- | ||
|ontology_enrichment_celltype=CL:0000220!4.14e-26!246;CL:0000055!6.13e-26!180;CL:0002321!1.68e-25!248;CL:0000222!2.77e-19!119;CL:0002371!6.36e-19!591;CL:0000144!1.44e-16!625;CL:0000548!1.70e-16!679;CL:0000004!1.70e-16!679;CL:0000255!1.70e-16!679;CL:0000012!1.03e-15!682;CL:0000187!1.23e-15!54;CL:0000680!1.38e-15!57;CL:0000056!1.38e-15!57;CL:0000355!1.38e-15!57;CL:0000183!2.01e-14!59;CL:0000359!4.77e-14!32;CL:0000192!6.19e-14!42;CL:0000514!6.19e-14!42;CL:0000393!1.79e-13!60;CL:0000211!1.79e-13!60;CL:0000057!1.14e-12!75;CL:0002139!1.95e-11!24;CL:0000115!6.49e-09!35;CL:0000071!1.04e-08!18;CL:0002546!1.04e-08!18;CL:0000003!1.71e-08!722;CL:0002494!5.81e-08!16;CL:0002620!6.64e-08!23;CL:0002539!1.42e-07!10;CL:0002078!5.35e-07!44 | |ontology_enrichment_celltype=CL:0000220!4.14e-26!246;CL:0000055!6.13e-26!180;CL:0002321!1.68e-25!248;CL:0000222!2.77e-19!119;CL:0002371!6.36e-19!591;CL:0000144!1.44e-16!625;CL:0000548!1.70e-16!679;CL:0000004!1.70e-16!679;CL:0000255!1.70e-16!679;CL:0000012!1.03e-15!682;CL:0000187!1.23e-15!54;CL:0000680!1.38e-15!57;CL:0000056!1.38e-15!57;CL:0000355!1.38e-15!57;CL:0000183!2.01e-14!59;CL:0000359!4.77e-14!32;CL:0000192!6.19e-14!42;CL:0000514!6.19e-14!42;CL:0000393!1.79e-13!60;CL:0000211!1.79e-13!60;CL:0000057!1.14e-12!75;CL:0002139!1.95e-11!24;CL:0000115!6.49e-09!35;CL:0000071!1.04e-08!18;CL:0002546!1.04e-08!18;CL:0000003!1.71e-08!722;CL:0002494!5.81e-08!16;CL:0002620!6.64e-08!23;CL:0002539!1.42e-07!10;CL:0002078!5.35e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.21e-14;32!CL:0002139;1.54e-12;24!CL:0000192;3.98e-11;43!CL:0000071;1.64e-09;18!CL:0000115;1.66e-09;36!CL:0000187;3.81e-09;55!CL:0002620;9.21e-09;23!CL:0002494;1.22e-08;16!CL:0002539;3.03e-08;10!CL:0000393;1.32e-07;61!CL:0000211;1.32e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.03e-24,250;CL:0000222,2.57e-19,121;CL:0000187,2.20e-16,55;CL:0000680,2.34e-16,58;CL:0000056,2.34e-16,58;CL:0000355,2.34e-16,58;CL:0000359,2.42e-15,32;CL:0000057,6.20e-15,76;CL:0000192,9.12e-15,43;CL:0000514,9.12e-15,43;CL:0000393,1.75e-14,61;CL:0000211,1.75e-14,61;CL:0002139,1.55e-12,24;CL:0000115,8.90e-11,36;CL:0000071,1.67e-09,18;CL:0002546,1.67e-09,18;CL:0002620,9.24e-09,23;CL:0002494,1.12e-08,16;CL:0002539,3.02e-08,10;CL:0002078,2.93e-07,45;CL:0000723,3.67e-07,433;CL:0000048,6.38e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;3.98e-11;43!CL:0002546;1.64e-09;18!CL:0000355;1.40e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!7.17e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.83e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.46e-25!42;UBERON:0003509!8.46e-25!42;UBERON:0004572!8.46e-25!42;UBERON:0004872!3.22e-23!84;UBERON:0000055!8.70e-22!69;UBERON:0001981!1.40e-21!60;UBERON:0007500!1.40e-21!60;UBERON:0004537!1.40e-21!60;UBERON:0006965!1.40e-21!60;UBERON:0004573!1.05e-19!33;UBERON:0004571!1.05e-19!33;UBERON:0002049!2.71e-19!79;UBERON:0007798!2.71e-19!79;UBERON:0000914!6.12e-19!83;UBERON:0002329!6.12e-19!83;UBERON:0003077!6.12e-19!83;UBERON:0003059!6.12e-19!83;UBERON:0007282!6.12e-19!83;UBERON:0009618!6.12e-19!83;UBERON:0007285!6.12e-19!83;UBERON:0003914!8.14e-19!118;UBERON:0000490!8.68e-18!138;UBERON:0000486!2.96e-17!82;UBERON:0004290!6.57e-17!70;UBERON:0004535!1.76e-16!110;UBERON:0005256!7.48e-16!143;UBERON:0001009!1.35e-15!113;UBERON:0003102!3.29e-14!95;UBERON:0000467!1.45e-13!625;UBERON:0000480!2.49e-13!626;UBERON:0001134!3.70e-13!61;UBERON:0002036!3.70e-13!61;UBERON:0003082!3.70e-13!61;UBERON:0002385!1.17e-12!63;UBERON:0001015!1.17e-12!63;UBERON:0000383!1.17e-12!63;UBERON:0000468!1.32e-12!659;UBERON:0000947!1.66e-12!21;UBERON:0010191!1.66e-12!21;UBERON:0002199!3.95e-11!45;UBERON:0002416!3.95e-11!45;UBERON:0002100!7.53e-11!216;UBERON:0000926!7.71e-11!448;UBERON:0004120!7.71e-11!448;UBERON:0006603!7.71e-11!448;UBERON:0002097!6.64e-10!40;UBERON:0000119!1.52e-09!312;UBERON:0000483!2.62e-09!309;UBERON:0000923!9.76e-09!604;UBERON:0005291!9.76e-09!604;UBERON:0006598!9.76e-09!604;UBERON:0002532!9.76e-09!604;UBERON:0001986!1.04e-08!18;UBERON:0004638!1.04e-08!18;UBERON:0004852!1.04e-08!18;UBERON:0000487!1.13e-08!22;UBERON:0000922!1.40e-08!612;UBERON:0002050!1.49e-08!605;UBERON:0005423!1.49e-08!605;UBERON:0003104!1.98e-08!238;UBERON:0009142!1.98e-08!238;UBERON:0006914!6.54e-08!25;UBERON:0004237!1.42e-07!10;UBERON:0004695!1.42e-07!10;UBERON:0002111!1.42e-07!10;UBERON:0004178!1.42e-07!10;UBERON:0000475!1.73e-07!365;UBERON:0001135!4.88e-07!15;UBERON:0004111!6.73e-07!241;UBERON:0000481!6.87e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.46e-19;42!UBERON:0003509;1.46e-19;42!UBERON:0004572;1.46e-19;42!UBERON:0004573;1.51e-19;33!UBERON:0004571;1.51e-19;33!UBERON:0007500;1.43e-14;56!UBERON:0001981;1.43e-14;56!UBERON:0004537;1.43e-14;56!UBERON:0000947;2.68e-13;21!UBERON:0010191;2.68e-13;21!UBERON:0000055;7.72e-13;65!UBERON:0002049;4.95e-10;75!UBERON:0007798;4.95e-10;75!UBERON:0003914;5.53e-10;74!UBERON:0004638;1.64e-09;18!UBERON:0001986;1.64e-09;18!UBERON:0004852;1.64e-09;18!UBERON:0000487;1.32e-08;22!UBERON:0004237;3.03e-08;10!UBERON:0004695;3.03e-08;10!UBERON:0002111;3.03e-08;10!UBERON:0004178;3.03e-08;10!UBERON:0006914;5.41e-08;25!UBERON:0002097;5.42e-08;41!UBERON:0001135;7.89e-08;15!UBERON:0002199;1.42e-07;46!UBERON:0002416;1.42e-07;46!UBERON:0000490;8.93e-07;33 | |||
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| ||
|short_description=p1@MMP1 | |short_description=p1@MMP1 | ||
}} | }} |
Latest revision as of 18:33, 24 September 2015
Short description: | p1@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | 0bp_to_ENST00000315274_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | P03956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.03e-24 | 250 |
mesodermal cell | 2.57e-19 | 121 |
muscle cell | 2.20e-16 | 55 |
muscle precursor cell | 2.34e-16 | 58 |
myoblast | 2.34e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-16 | 58 |
vascular associated smooth muscle cell | 2.42e-15 | 32 |
fibroblast | 6.20e-15 | 76 |
smooth muscle cell | 9.12e-15 | 43 |
smooth muscle myoblast | 9.12e-15 | 43 |
electrically responsive cell | 1.75e-14 | 61 |
electrically active cell | 1.75e-14 | 61 |
endothelial cell of vascular tree | 1.55e-12 | 24 |
endothelial cell | 8.90e-11 | 36 |
blood vessel endothelial cell | 1.67e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-09 | 18 |
skin fibroblast | 9.24e-09 | 23 |
cardiocyte | 1.12e-08 | 16 |
aortic smooth muscle cell | 3.02e-08 | 10 |
meso-epithelial cell | 2.93e-07 | 45 |
somatic stem cell | 3.67e-07 | 433 |
multi fate stem cell | 6.38e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.83e-07 | 14 |