FFCP PHASE1:Hg19::chr11:111228348..111228370,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:111228348..111228370,- | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111228348..111228370,- | |description=CAGE_peak_at_chr11:111228348..111228370,- | ||
|id=chr11:111228348..111228370,- | |id=chr11:111228348..111228370,- | ||
|ontology_enrichment_celltype=CL:0000945!1.41e-59!24;CL:0000826!1.41e-59!24;CL:0000236!2.39e-32!14;CL:0000542!1.02e-27!53;CL:0000051!1.02e-27!53;CL:0000838!6.56e-26!52;CL:0002087!3.16e-13!119;CL:0000738!6.44e-12!140;CL:0000817!9.08e-10!3;CL:0002031!1.91e-09!124;CL:0000842!2.39e-08!3;CL:0000037!3.09e-08!172;CL:0000566!3.09e-08!172;CL:0000988!2.26e-07!182;CL:0000785!2.81e-07!2;CL:0000955!2.81e-07!2;CL:0000818!2.81e-07!2;CL:0000954!2.81e-07!2;CL:0000816!2.81e-07!2 | |ontology_enrichment_celltype=CL:0000945!1.41e-59!24;CL:0000826!1.41e-59!24;CL:0000236!2.39e-32!14;CL:0000542!1.02e-27!53;CL:0000051!1.02e-27!53;CL:0000838!6.56e-26!52;CL:0002087!3.16e-13!119;CL:0000738!6.44e-12!140;CL:0000817!9.08e-10!3;CL:0002031!1.91e-09!124;CL:0000842!2.39e-08!3;CL:0000037!3.09e-08!172;CL:0000566!3.09e-08!172;CL:0000988!2.26e-07!182;CL:0000785!2.81e-07!2;CL:0000955!2.81e-07!2;CL:0000818!2.81e-07!2;CL:0000954!2.81e-07!2;CL:0000816!2.81e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.90e-123;24!CL:0000236;2.21e-50;13!CL:0000542;7.90e-37;53!CL:0002087;4.78e-10;104!CL:0000785;9.79e-09;1!CL:0000819;9.79e-09;1!CL:0000946;1.13e-08;1!CL:0000786;1.13e-08;1!CL:0000817;6.02e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.16e-123,24;CL:0000826,5.16e-123,24;CL:0000542,4.85e-59,53;CL:0000051,4.85e-59,53;CL:0000236,7.97e-57,14;CL:0000838,9.91e-55,52;CL:0002087,9.10e-25,115;CL:0000817,7.67e-22,3;CL:0002031,2.89e-21,120;CL:0000738,2.46e-20,136;CL:0002032,1.49e-16,161;CL:0000837,1.49e-16,161;CL:0000785,1.07e-15,2;CL:0000955,1.07e-15,2;CL:0000818,1.07e-15,2;CL:0000954,1.07e-15,2;CL:0000816,1.07e-15,2;CL:0000037,1.08e-15,168;CL:0000988,1.09e-14,177;CL:0000819,9.79e-09,1;CL:0000946,1.13e-08,1;CL:0000786,1.13e-08,1;CL:0000980,1.13e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;7.90e-37;53!CL:0000954;1.07e-15;2!UBERON:0004872;1.82e-09;7!UBERON:0001045;2.42e-08;1 | |||
|ontology_enrichment_disease=DOID:0060058!9.03e-14!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.13e-25;10!DOID:0060073;9.79e-09;1!DOID:8675;9.79e-09;1!DOID:630;1.52e-08;1!DOID:0050177;1.52e-08;1!DOID:0050427;1.52e-08;1!DOID:2355;2.99e-08;1!DOID:4960;3.97e-08;1!DOID:0070004;3.97e-08;1!DOID:12603;3.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.31e-25,10;DOID:2531,1.21e-09,51;DOID:0060083,1.21e-09,51;DOID:0060073,9.79e-09,1;DOID:8675,9.79e-09,1;DOID:630,1.41e-08,1;DOID:0050177,1.41e-08,1;DOID:0050427,1.41e-08,1;DOID:2355,3.10e-08,1;DOID:12603,3.83e-08,1;DOID:4960,4.11e-08,1;DOID:0070004,4.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.06e-10!15;UBERON:0000179!5.06e-10!15;UBERON:0000463!5.06e-10!15;UBERON:0004177!1.57e-09!7;UBERON:0002106!2.30e-09!3;UBERON:0004854!2.30e-09!3;UBERON:0009034!2.30e-09!3;UBERON:0002095!2.30e-09!3;UBERON:0004782!2.30e-09!3;UBERON:0003281!2.30e-09!3;UBERON:0009664!2.30e-09!3;UBERON:0002296!2.30e-09!3;UBERON:0005602!2.30e-09!3;UBERON:0001179!2.30e-09!3;UBERON:0006293!2.30e-09!3;UBERON:0007023!1.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.78e-10;3!UBERON:0001154;2.42e-08;1!UBERON:0001153;2.42e-08;1!UBERON:0009854;2.42e-08;1!UBERON:0000029;2.99e-08;1!UBERON:0002372;6.02e-08;1!UBERON:0001961;6.02e-08;1!UBERON:0001744;6.02e-08;1!UBERON:0001042;6.02e-08;1!UBERON:0001735;6.02e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.12e-10,3;UBERON:0004854,3.12e-10,3;UBERON:0009034,3.12e-10,3;UBERON:0002095,3.12e-10,3;UBERON:0004782,3.12e-10,3;UBERON:0003281,3.12e-10,3;UBERON:0009664,3.12e-10,3;UBERON:0002296,3.12e-10,3;UBERON:0005602,3.12e-10,3;UBERON:0001179,3.12e-10,3;UBERON:0006293,3.12e-10,3;UBERON:0001154,2.17e-08,1;UBERON:0001153,2.17e-08,1;UBERON:0001045,2.17e-08,1;UBERON:0000029,2.89e-08,1;UBERON:0002372,5.07e-08,1;UBERON:0001961,5.07e-08,1;UBERON:0001744,5.07e-08,1;UBERON:0001735,5.07e-08,1 | |||
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| ||
|short_description=p@chr11:111228348..111228370,- | |short_description=p@chr11:111228348..111228370,- | ||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111228348..111228370, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111228348..111228370, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.16e-123 | 24 |
pro-B cell | 5.16e-123 | 24 |
lymphocyte | 4.85e-59 | 53 |
common lymphoid progenitor | 4.85e-59 | 53 |
B cell | 7.97e-57 | 14 |
lymphoid lineage restricted progenitor cell | 9.91e-55 | 52 |
nongranular leukocyte | 9.10e-25 | 115 |
precursor B cell | 7.67e-22 | 3 |
hematopoietic lineage restricted progenitor cell | 2.89e-21 | 120 |
leukocyte | 2.46e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.49e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-16 | 161 |
mature B cell | 1.07e-15 | 2 |
pre-B-II cell | 1.07e-15 | 2 |
transitional stage B cell | 1.07e-15 | 2 |
small pre-B-II cell | 1.07e-15 | 2 |
immature B cell | 1.07e-15 | 2 |
hematopoietic stem cell | 1.08e-15 | 168 |
hematopoietic cell | 1.09e-14 | 177 |
B-1 B cell | 9.79e-09 | 1 |
antibody secreting cell | 1.13e-08 | 1 |
plasma cell | 1.13e-08 | 1 |
plasmablast | 1.13e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.12e-10 | 3 |
gastrointestinal system mesentery | 3.12e-10 | 3 |
stomach region | 3.12e-10 | 3 |
mesentery | 3.12e-10 | 3 |
gastrointestinal system serosa | 3.12e-10 | 3 |
mesentery of stomach | 3.12e-10 | 3 |
gut mesentery | 3.12e-10 | 3 |
dorsal mesentery | 3.12e-10 | 3 |
dorsal mesogastrium | 3.12e-10 | 3 |
peritoneal cavity | 3.12e-10 | 3 |
spleen primordium | 3.12e-10 | 3 |
vermiform appendix | 2.17e-08 | 1 |
caecum | 2.17e-08 | 1 |
midgut | 2.17e-08 | 1 |
lymph node | 2.89e-08 | 1 |
tonsil | 5.07e-08 | 1 |
mucosa-associated lymphoid tissue | 5.07e-08 | 1 |
lymphoid tissue | 5.07e-08 | 1 |
tonsillar ring | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.31e-25 | 10 |
hematologic cancer | 1.21e-09 | 51 |
immune system cancer | 1.21e-09 | 51 |
lymphatic system cancer | 9.79e-09 | 1 |
lymphosarcoma | 9.79e-09 | 1 |
genetic disease | 1.41e-08 | 1 |
monogenic disease | 1.41e-08 | 1 |
xeroderma pigmentosum | 1.41e-08 | 1 |
anemia | 3.10e-08 | 1 |
acute leukemia | 3.83e-08 | 1 |
bone marrow cancer | 4.11e-08 | 1 |
myeloma | 4.11e-08 | 1 |