FFCP PHASE1:Hg19::chr11:111228555..111228566,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:111228555..111228566,- | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111228555..111228566,- | |description=CAGE_peak_at_chr11:111228555..111228566,- | ||
|id=chr11:111228555..111228566,- | |id=chr11:111228555..111228566,- | ||
|ontology_enrichment_celltype=CL:0000945!3.12e-57!24;CL:0000826!3.12e-57!24;CL:0000542!5.66e-31!53;CL:0000051!5.66e-31!53;CL:0000838!9.21e-29!52;CL:0000236!2.47e-24!14;CL:0002087!3.92e-15!119;CL:0000817!4.73e-12!3;CL:0000738!7.16e-12!140;CL:0000842!1.23e-10!3;CL:0002031!1.13e-09!124;CL:0000785!7.39e-09!2;CL:0000955!7.39e-09!2;CL:0000818!7.39e-09!2;CL:0000954!7.39e-09!2;CL:0000816!7.39e-09!2;CL:0000037!1.78e-08!172;CL:0000566!1.78e-08!172;CL:0000224!4.38e-08!4;CL:0000988!1.14e-07!182 | |ontology_enrichment_celltype=CL:0000945!3.12e-57!24;CL:0000826!3.12e-57!24;CL:0000542!5.66e-31!53;CL:0000051!5.66e-31!53;CL:0000838!9.21e-29!52;CL:0000236!2.47e-24!14;CL:0002087!3.92e-15!119;CL:0000817!4.73e-12!3;CL:0000738!7.16e-12!140;CL:0000842!1.23e-10!3;CL:0002031!1.13e-09!124;CL:0000785!7.39e-09!2;CL:0000955!7.39e-09!2;CL:0000818!7.39e-09!2;CL:0000954!7.39e-09!2;CL:0000816!7.39e-09!2;CL:0000037!1.78e-08!172;CL:0000566!1.78e-08!172;CL:0000224!4.38e-08!4;CL:0000988!1.14e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.83e-90;24!CL:0000542;2.31e-28;53!CL:0000236;1.22e-16;13!CL:0000785;1.65e-10;1!CL:0000819;1.65e-10;1!CL:0000946;2.16e-10;1!CL:0000786;2.16e-10;1!CL:0002087;5.60e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.54e-90,24;CL:0000826,1.54e-90,24;CL:0000542,2.65e-50,53;CL:0000051,2.65e-50,53;CL:0000838,1.12e-45,52;CL:0000236,3.69e-22,14;CL:0002087,2.05e-21,115;CL:0000785,3.13e-19,2;CL:0000955,3.13e-19,2;CL:0000818,3.13e-19,2;CL:0000954,3.13e-19,2;CL:0000816,3.13e-19,2;CL:0002031,4.91e-18,120;CL:0000738,1.13e-17,136;CL:0002032,1.76e-14,161;CL:0000837,1.76e-14,161;CL:0000037,9.39e-14,168;CL:0000817,3.85e-13,3;CL:0000988,6.65e-13,177;CL:0000819,1.65e-10,1;CL:0000946,1.80e-10,1;CL:0000786,1.80e-10,1;CL:0000980,1.80e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.31e-28;53!CL:0000954;3.74e-19;2!UBERON:0004872;1.46e-11;7!UBERON:0001045;6.91e-10;1!UBERON:0005425;6.91e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!3.95e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.15e-31;10!DOID:0060073;1.65e-10;1!DOID:8675;1.65e-10;1!DOID:630;2.16e-10;1!DOID:0050177;2.16e-10;1!DOID:0050427;2.16e-10;1!DOID:4960;6.91e-10;1!DOID:0070004;6.91e-10;1!DOID:12603;6.91e-10;1!DOID:2355;6.91e-10;1!DOID:2531;4.50e-07;51!DOID:0060083;4.50e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.16e-31,10;DOID:2531,1.68e-12,51;DOID:0060083,1.68e-12,51;DOID:0060073,1.65e-10,1;DOID:8675,1.65e-10,1;DOID:630,2.59e-10,1;DOID:0050177,2.59e-10,1;DOID:0050427,2.59e-10,1;DOID:4960,6.33e-10,1;DOID:0070004,6.33e-10,1;DOID:2355,6.91e-10,1;DOID:12603,7.55e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.63e-11!3;UBERON:0004854!5.63e-11!3;UBERON:0009034!5.63e-11!3;UBERON:0002095!5.63e-11!3;UBERON:0004782!5.63e-11!3;UBERON:0003281!5.63e-11!3;UBERON:0009664!5.63e-11!3;UBERON:0002296!5.63e-11!3;UBERON:0005602!5.63e-11!3;UBERON:0001179!5.63e-11!3;UBERON:0006293!5.63e-11!3;UBERON:0000178!3.15e-10!15;UBERON:0000179!3.15e-10!15;UBERON:0000463!3.15e-10!15;UBERON:0004177!6.66e-08!7;UBERON:0007023!8.71e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.38e-12;3!UBERON:0001154;6.91e-10;1!UBERON:0000941;6.91e-10;1!UBERON:0001153;6.91e-10;1!UBERON:0001785;6.91e-10;1!UBERON:0002464;6.91e-10;1!UBERON:0004904;6.91e-10;1!UBERON:0009854;6.91e-10;1!UBERON:0001021;6.91e-10;1!UBERON:0004177;9.22e-08;5!UBERON:0005057;9.22e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.56e-12,3;UBERON:0004854,3.56e-12,3;UBERON:0009034,3.56e-12,3;UBERON:0002095,3.56e-12,3;UBERON:0004782,3.56e-12,3;UBERON:0003281,3.56e-12,3;UBERON:0009664,3.56e-12,3;UBERON:0002296,3.56e-12,3;UBERON:0005602,3.56e-12,3;UBERON:0001179,3.56e-12,3;UBERON:0006293,3.56e-12,3;UBERON:0000941,5.30e-10,1;UBERON:0001785,5.30e-10,1;UBERON:0002464,5.30e-10,1;UBERON:0004904,5.30e-10,1;UBERON:0001021,5.30e-10,1;UBERON:0003902,5.30e-10,1;UBERON:0005425,5.30e-10,1;UBERON:0001154,5.79e-10,1;UBERON:0001153,5.79e-10,1;UBERON:0001045,5.79e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,2.54511827294832,3.54198515911557,0,0,0,0,0,0,2.47895041856965,2.55904618477359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0,1.60158394814405,0,0.661044872784862,0,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,1.30062222588003,0.865615277858669,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.48764903921463,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0.988058159489721,3.65377795142688,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80272158934072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.03382309777839,0.0644578879735772,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,1.81146414231924,3.52625341533556 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,2.54511827294832,3.54198515911557,0,0,0,0,0,0,2.47895041856965,2.55904618477359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0,1.60158394814405,0,0.661044872784862,0,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,0,0,0,1.30062222588003,0.865615277858669,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.48764903921463,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0.496166021811951,0.988058159489721,3.65377795142688,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80272158934072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.03382309777839,0.0644578879735772,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0,0.875576689189638,0.143444410785353,0,0,0,0,0,0,0,0,0,1.81146414231924,3.52625341533556 | ||
|short_description=p@chr11:111228555..111228566,- | |short_description=p@chr11:111228555..111228566,- | ||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111228555..111228566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111228555..111228566, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.54e-90 | 24 |
pro-B cell | 1.54e-90 | 24 |
lymphocyte | 2.65e-50 | 53 |
common lymphoid progenitor | 2.65e-50 | 53 |
lymphoid lineage restricted progenitor cell | 1.12e-45 | 52 |
B cell | 3.69e-22 | 14 |
nongranular leukocyte | 2.05e-21 | 115 |
mature B cell | 3.13e-19 | 2 |
pre-B-II cell | 3.13e-19 | 2 |
transitional stage B cell | 3.13e-19 | 2 |
small pre-B-II cell | 3.13e-19 | 2 |
immature B cell | 3.13e-19 | 2 |
hematopoietic lineage restricted progenitor cell | 4.91e-18 | 120 |
leukocyte | 1.13e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.76e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-14 | 161 |
hematopoietic stem cell | 9.39e-14 | 168 |
precursor B cell | 3.85e-13 | 3 |
hematopoietic cell | 6.65e-13 | 177 |
B-1 B cell | 1.65e-10 | 1 |
antibody secreting cell | 1.80e-10 | 1 |
plasma cell | 1.80e-10 | 1 |
plasmablast | 1.80e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.56e-12 | 3 |
gastrointestinal system mesentery | 3.56e-12 | 3 |
stomach region | 3.56e-12 | 3 |
mesentery | 3.56e-12 | 3 |
gastrointestinal system serosa | 3.56e-12 | 3 |
mesentery of stomach | 3.56e-12 | 3 |
gut mesentery | 3.56e-12 | 3 |
dorsal mesentery | 3.56e-12 | 3 |
dorsal mesogastrium | 3.56e-12 | 3 |
peritoneal cavity | 3.56e-12 | 3 |
spleen primordium | 3.56e-12 | 3 |
cranial nerve II | 5.30e-10 | 1 |
cranial nerve | 5.30e-10 | 1 |
nerve trunk | 5.30e-10 | 1 |
nerve connecting eye with brain | 5.30e-10 | 1 |
nerve | 5.30e-10 | 1 |
retinal neural layer | 5.30e-10 | 1 |
presumptive neural retina | 5.30e-10 | 1 |
vermiform appendix | 5.79e-10 | 1 |
caecum | 5.79e-10 | 1 |
midgut | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.16e-31 | 10 |
hematologic cancer | 1.68e-12 | 51 |
immune system cancer | 1.68e-12 | 51 |
lymphatic system cancer | 1.65e-10 | 1 |
lymphosarcoma | 1.65e-10 | 1 |
genetic disease | 2.59e-10 | 1 |
monogenic disease | 2.59e-10 | 1 |
xeroderma pigmentosum | 2.59e-10 | 1 |
bone marrow cancer | 6.33e-10 | 1 |
myeloma | 6.33e-10 | 1 |
anemia | 6.91e-10 | 1 |
acute leukemia | 7.55e-10 | 1 |