FFCP PHASE1:Hg19::chr11:22696343..22696354,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2620 | |EntrezGene=2620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |HGNC=4167 | ||
|TSSclassifier=strong | |||
|UniProt=O43903,E9PRR5 | |UniProt=O43903,E9PRR5 | ||
|association_with_transcript=24bp_to_ENST00000433790,ENST00000532398,NM_005256,uc001mqo.2_5end | |association_with_transcript=24bp_to_ENST00000433790,ENST00000532398,NM_005256,uc001mqo.2_5end | ||
|cluster_id=chr11:22696343..22696354,+ | |||
|coexpression_cluster_id=C1140 | |||
|description=CAGE_peak_18_at_GAS2_5end | |description=CAGE_peak_18_at_GAS2_5end | ||
|id=chr11:22696343..22696354,+ | |id=chr11:22696343..22696354,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.72e-21!12;CL:0000417!5.72e-21!12;CL:0000668!5.72e-21!12;CL:0000414!5.72e-21!12;CL:0000412!5.72e-21!12;CL:0000182!5.72e-21!12;CL:0002563!8.96e-11!4;CL:0000223!1.24e-07!59;CL:0000945!7.16e-07!24;CL:0000826!7.16e-07!24 | |ontology_enrichment_celltype=CL:0000181!5.72e-21!12;CL:0000417!5.72e-21!12;CL:0000668!5.72e-21!12;CL:0000414!5.72e-21!12;CL:0000412!5.72e-21!12;CL:0000182!5.72e-21!12;CL:0002563!8.96e-11!4;CL:0000223!1.24e-07!59;CL:0000945!7.16e-07!24;CL:0000826!7.16e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.92e-22;12!CL:0000945;9.22e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-22,12;CL:0000223,3.67e-07,58;CL:0000945,8.95e-07,24;CL:0000826,8.95e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.69e-24;11!UBERON:0009497;1.25e-20;13!UBERON:0001041;3.91e-09;30!UBERON:0003104;9.02e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.18e-19!19;UBERON:0006925!9.18e-19!19;UBERON:0008836!9.18e-19!19;UBERON:0005057!3.17e-18!26;UBERON:0008835!3.72e-16!22;UBERON:0003894!3.72e-16!22;UBERON:0009854!1.94e-15!23;UBERON:0007499!3.58e-14!25;UBERON:0009497!3.58e-14!25;UBERON:0000015!3.58e-14!25;UBERON:0002423!3.58e-14!25;UBERON:0006235!3.58e-14!25;UBERON:0004161!3.58e-14!25;UBERON:0009856!1.30e-13!26;UBERON:0002365!2.37e-11!31;UBERON:0002330!2.37e-11!31;UBERON:0003112!4.44e-11!1;UBERON:0000032!4.44e-11!1;UBERON:0005253!4.44e-11!1;UBERON:0003128!4.44e-11!1;UBERON:0002241!4.44e-11!1;UBERON:0001703!4.44e-11!1;UBERON:0004761!4.44e-11!1;UBERON:0009617!4.44e-11!1;UBERON:0003929!6.12e-11!54;UBERON:0001242!8.96e-11!4;UBERON:0001262!8.96e-11!4;UBERON:0004786!8.96e-11!4;UBERON:0004808!8.96e-11!4;UBERON:0001277!8.96e-11!4;UBERON:0000949!2.72e-10!45;UBERON:0002368!5.26e-10!35;UBERON:0003350!8.50e-09!5;UBERON:0005172!2.96e-08!55;UBERON:0005173!2.96e-08!55;UBERON:0004921!1.27e-07!129;UBERON:0004185!1.27e-07!129;UBERON:0002417!2.26e-07!61;UBERON:0000916!2.26e-07!61;UBERON:0005911!7.14e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.89e-22;19!UBERON:0006925;7.89e-22;19!UBERON:0002423;1.26e-16;25!UBERON:0002365;6.19e-13;31!UBERON:0002330;6.19e-13;31!UBERON:0002368;1.08e-10;33!UBERON:0000949;6.96e-09;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.40e-22,19;UBERON:0006925,7.40e-22,19;UBERON:0008836,7.40e-22,19;UBERON:0008835,6.72e-19,22;UBERON:0003894,6.72e-19,22;UBERON:0009854,4.40e-18,23;UBERON:0007499,1.20e-16,25;UBERON:0009497,1.20e-16,25;UBERON:0000015,1.20e-16,25;UBERON:0002423,1.20e-16,25;UBERON:0006235,1.20e-16,25;UBERON:0004161,1.20e-16,25;UBERON:0009856,5.19e-16,26;UBERON:0002365,1.92e-13,31;UBERON:0002330,1.92e-13,31;UBERON:0002368,6.47e-12,35;UBERON:0003929,7.74e-11,54;UBERON:0000949,2.83e-09,45;UBERON:0005172,9.99e-08,54;UBERON:0005173,9.99e-08,54;UBERON:0002530,4.54e-07,59;UBERON:0005911,4.70e-07,82;UBERON:0002417,5.97e-07,60;UBERON:0000916,5.97e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.39571002064908,1.8890587515283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81201319306614,1.2362378757175,2.15691340333392,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.39571002064908,1.8890587515283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81201319306614,1.2362378757175,2.15691340333392,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@GAS2 | |short_description=p18@GAS2 | ||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p18@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GAS2_5end |
Coexpression cluster: | C1140_hepatocellular_B_small_gastrointestinal_argyrophil_liver_temporal |
Association with transcript: | 24bp_to_ENST00000433790, ENST00000532398, NM_005256, uc001mqo.2_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903E9PRR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.92e-22 | 12 |
endodermal cell | 3.67e-07 | 58 |
lymphocyte of B lineage | 8.95e-07 | 24 |
pro-B cell | 8.95e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
liver | 7.40e-22 | 19 |
digestive gland | 7.40e-22 | 19 |
liver bud | 7.40e-22 | 19 |
hepatic diverticulum | 6.72e-19 | 22 |
liver primordium | 6.72e-19 | 22 |
digestive tract diverticulum | 4.40e-18 | 23 |
epithelial sac | 1.20e-16 | 25 |
epithelium of foregut-midgut junction | 1.20e-16 | 25 |
anatomical boundary | 1.20e-16 | 25 |
hepatobiliary system | 1.20e-16 | 25 |
foregut-midgut junction | 1.20e-16 | 25 |
septum transversum | 1.20e-16 | 25 |
sac | 5.19e-16 | 26 |
exocrine gland | 1.92e-13 | 31 |
exocrine system | 1.92e-13 | 31 |
endocrine gland | 6.47e-12 | 35 |
gut epithelium | 7.74e-11 | 54 |
endocrine system | 2.83e-09 | 45 |
abdomen element | 9.99e-08 | 54 |
abdominal segment element | 9.99e-08 | 54 |
gland | 4.54e-07 | 59 |
endo-epithelium | 4.70e-07 | 82 |
abdominal segment of trunk | 5.97e-07 | 60 |
abdomen | 5.97e-07 | 60 |