Personal tools

FFCP PHASE1:Mm9::chr18:25912112..25912133,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108013
|EntrezGene=108013
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q7TSY6
|UniProt=Q7TSY6
|association_with_transcript=350bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end
|association_with_transcript=350bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end
|cluster_id=chr18:25912112..25912133,-
|description=CAGE_peak_4_at_Celf4_5end
|description=CAGE_peak_4_at_Celf4_5end
|id=chr18:25912112..25912133,-
|id=chr18:25912112..25912133,-
|ontology_enrichment_celltype=CL:0000117!2.81e-17!23;CL:0000337!2.81e-17!23;CL:0000540!4.15e-16!33;CL:0000047!4.15e-16!33;CL:0000031!4.15e-16!33;CL:0000404!4.15e-16!33;CL:0000393!1.62e-12!39;CL:0000211!1.62e-12!39;CL:0002319!8.62e-11!43;CL:0000221!2.81e-10!44;CL:0000133!2.81e-10!44;CL:0000055!3.00e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-23,23;CL:0000337,3.26e-23,23;CL:0000540,1.21e-17,33;CL:0000047,1.21e-17,33;CL:0000031,1.21e-17,33;CL:0000404,1.21e-17,33;CL:0000393,1.33e-13,39;CL:0000211,1.33e-13,39;CL:0002319,1.45e-11,43;CL:0000221,4.05e-11,44;CL:0000133,4.05e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.78e-28!75;UBERON:0001016!1.78e-28!75;UBERON:0001017!2.89e-28!73;UBERON:0005743!2.89e-28!73;UBERON:0002346!7.22e-26!71;UBERON:0003075!7.22e-26!71;UBERON:0007284!7.22e-26!71;UBERON:0001049!1.81e-25!52;UBERON:0005068!1.81e-25!52;UBERON:0006241!1.81e-25!52;UBERON:0007135!1.81e-25!52;UBERON:0000033!8.25e-25!63;UBERON:0000955!2.37e-24!50;UBERON:0006238!2.37e-24!50;UBERON:0002616!1.71e-23!49;UBERON:0004121!2.15e-23!102;UBERON:0000924!2.15e-23!102;UBERON:0006601!2.15e-23!102;UBERON:0002020!5.54e-23!34;UBERON:0003056!1.13e-22!49;UBERON:0003080!2.59e-20!40;UBERON:0002780!1.29e-19!39;UBERON:0001890!1.29e-19!39;UBERON:0006240!1.29e-19!39;UBERON:0002791!2.46e-19!29;UBERON:0003528!2.46e-19!29;UBERON:0001893!2.46e-19!29;UBERON:0000956!2.27e-13!21;UBERON:0001869!2.27e-13!21;UBERON:0000203!2.27e-13!21;UBERON:0007811!4.56e-13!86;UBERON:0002619!6.54e-11!17;UBERON:0000153!2.53e-10!94;UBERON:0002021!4.81e-10!10;UBERON:0000411!4.81e-10!10;UBERON:0001950!4.81e-10!10;UBERON:0002420!3.34e-07!8;UBERON:0007245!3.34e-07!8;UBERON:0010009!3.34e-07!8;UBERON:0010011!3.34e-07!8;UBERON:0000454!3.34e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.05e-31,34;UBERON:0000073,1.90e-31,54;UBERON:0001017,1.44e-30,73;UBERON:0001016,2.69e-29,75;UBERON:0001049,4.43e-29,52;UBERON:0005068,4.43e-29,52;UBERON:0006241,4.43e-29,52;UBERON:0007135,4.43e-29,52;UBERON:0002346,9.47e-29,64;UBERON:0003075,9.47e-29,64;UBERON:0007284,9.47e-29,64;UBERON:0003528,1.17e-26,29;UBERON:0002791,1.17e-26,29;UBERON:0001893,1.17e-26,29;UBERON:0004121,6.54e-25,95;UBERON:0000924,6.54e-25,95;UBERON:0006601,6.54e-25,95;UBERON:0000955,1.96e-24,47;UBERON:0006238,1.96e-24,47;UBERON:0002616,2.39e-23,46;UBERON:0010371,2.75e-23,73;UBERON:0003056,6.20e-22,49;UBERON:0003080,1.36e-21,40;UBERON:0002780,1.09e-20,39;UBERON:0001890,1.09e-20,39;UBERON:0006240,1.09e-20,39;UBERON:0000956,2.15e-18,21;UBERON:0001869,2.15e-18,21;UBERON:0000203,2.15e-18,21;UBERON:0010314,2.20e-15,92;UBERON:0002619,5.34e-15,17;UBERON:0002021,3.05e-13,10;UBERON:0000411,3.05e-13,10;UBERON:0001950,3.05e-13,10;UBERON:0002420,2.45e-09,8;UBERON:0007245,2.45e-09,8;UBERON:0010009,2.45e-09,8;UBERON:0010011,2.45e-09,8;UBERON:0000454,2.45e-09,8;UBERON:0003076,7.02e-08,12;UBERON:0003057,7.02e-08,12;UBERON:0002240,6.78e-07,6;UBERON:0005174,6.78e-07,6;UBERON:0001137,6.78e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,13.5552028775931,20.1016572123373,9.50747105259269,0,0,0,0,0,0,0,2.90330914463737,3.64516033495565,2.94454945891935,9.99778445413313,8.1721360152097,6.98197555525238,5.271500906003,6.43453150627015,16.5173821499083,12.5133591323484,13.0565553267807,15.0350368012421,13.2657083223494,18.7528813400434,6.97957497503452,13.5063026407603,12.835052813252,11.7851434189467,11.5321061447273,11.7431650869939,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,3.22058876712702,3.97948742945565,0,0,0,0,8.83764772488454,6.40500843946077,11.6858547464964,22.2495129846114,23.2701066170601,12.8828587626927,12.6548185192851,0.305518091550949,0,0,1.47309299120532,0,0.689706313300419,0.360124259610698,0.753524089178575,2.17716797284249,2.0498195245576,2.62364828767241,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0,0,16.8231958851302,10.9078889122042,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,6.56385444916338,0,0,0.94652465824877,0.780877488593277,1.72338718186239,0,0.445597348164788,0.283076530788832,0,1.46127928955656,2.76701444562566,16.708708453934,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.164549020602121,0,0.23467170806371,0,0.661585194164886,0,0,0,0,0,0.291480836629851,5.93360966433631,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9785847603851,22.5559365888517,23.4887160510153,18.9038500578056,16.4419804744954,14.3524840504043,27.0009000092722,21.6154177547626,17.2194115413998,19.6748918465692,0.103787347584177,1.19707462020309,1.70733605754134,1.70174701947806,2.09613162627982,0.919217542250071,1.55572709461131,3.7086310303001,0.962757628775446,2.02157769411038,1.52087579934144,1.50901073108861,1.87283014939765,2.11283002936069,2.92920891673628,1.42888107384922,2.43357084484197,1.35036454324594,1.64834360321323,2.35518272215036,2.40008476669791,1.59728225543404,2.38436189947321,2.18019624948493,1.88218760830661,1.69229215783353,1.64635175585495,0.789209134313529,3.12349461845482,1.68342681497322,1.30498519936592,2.36410757701352,0.818462086339379,1.54936841185966,0.578719832943424,3.49734809113124,1.63752125911786,2.57845264857958,0.956441660344217,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,13.5552028775931,20.1016572123373,9.50747105259269,0,0,0,0,0,0,0,2.90330914463737,3.64516033495565,2.94454945891935,9.99778445413313,8.1721360152097,6.98197555525238,5.271500906003,6.43453150627015,16.5173821499083,12.5133591323484,13.0565553267807,15.0350368012421,13.2657083223494,18.7528813400434,6.97957497503452,13.5063026407603,12.835052813252,11.7851434189467,11.5321061447273,11.7431650869939,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,3.22058876712702,3.97948742945565,0,0,0,0,8.83764772488454,6.40500843946077,11.6858547464964,22.2495129846114,23.2701066170601,12.8828587626927,12.6548185192851,0.305518091550949,0,0,1.47309299120532,0,0.689706313300419,0.360124259610698,0.753524089178575,2.17716797284249,2.0498195245576,2.62364828767241,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0,0,16.8231958851302,10.9078889122042,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,6.56385444916338,0,0,0.94652465824877,0.780877488593277,1.72338718186239,0,0.445597348164788,0.283076530788832,0,1.46127928955656,2.76701444562566,16.708708453934,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.680879211507576,0,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.164549020602121,0,0.23467170806371,0,0.661585194164886,0,0,0,0,0,0.291480836629851,5.93360966433631,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9785847603851,22.5559365888517,23.4887160510153,18.9038500578056,16.4419804744954,14.3524840504043,27.0009000092722,21.6154177547626,17.2194115413998,19.6748918465692,0.103787347584177,1.19707462020309,1.70733605754134,1.70174701947806,2.09613162627982,0.919217542250071,1.55572709461131,3.7086310303001,0.962757628775446,2.02157769411038,1.52087579934144,1.50901073108861,1.87283014939765,2.11283002936069,2.92920891673628,1.42888107384922,2.43357084484197,1.35036454324594,1.64834360321323,2.35518272215036,2.40008476669791,1.59728225543404,2.38436189947321,2.18019624948493,1.88218760830661,1.69229215783353,1.64635175585495,0.789209134313529,3.12349461845482,1.68342681497322,1.30498519936592,2.36410757701352,0.818462086339379,1.54936841185966,0.578719832943424,3.49734809113124,1.63752125911786,2.57845264857958,0.956441660344217,0.220591419119515,0
|short_description=p4@Celf4
|short_description=p4@Celf4
}}
}}

Latest revision as of 03:07, 27 September 2015

Short description:p4@Celf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Celf4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 350bp_to_ENSMUST00000025117, ENSMUST00000078609, ENSMUST00000115816, NM_001146292, NM_001146293, NM_001146294, NM_001146295, NM_001174074, NM_133195, uc008ehk.2, uc008ehl.2, uc012ban.1, uc012bao.1, uc012bap.1, uc012baq.1_5end
EntrezGene:Celf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Celf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F111.69
cortex, adult.CNhs10473.12-14D522.25
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B212.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G110.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.26e-2323
neuroblast (sensu Vertebrata)3.26e-2323
neuron1.21e-1733
neuronal stem cell1.21e-1733
neuroblast1.21e-1733
electrically signaling cell1.21e-1733
electrically responsive cell1.33e-1339
electrically active cell1.33e-1339
neural cell1.45e-1143
ectodermal cell4.05e-1144
neurectodermal cell4.05e-1144

Uber anatomy
Ontology termp-valuen
gray matter1.05e-3134
regional part of nervous system1.90e-3154
central nervous system1.44e-3073
nervous system2.69e-2975
neural tube4.43e-2952
neural rod4.43e-2952
future spinal cord4.43e-2952
neural keel4.43e-2952
neurectoderm9.47e-2964
neural plate9.47e-2964
presumptive neural plate9.47e-2964
brain grey matter1.17e-2629
regional part of telencephalon1.17e-2629
telencephalon1.17e-2629
ectoderm-derived structure6.54e-2595
ectoderm6.54e-2595
presumptive ectoderm6.54e-2595
brain1.96e-2447
future brain1.96e-2447
regional part of brain2.39e-2346
ecto-epithelium2.75e-2373
pre-chordal neural plate6.20e-2249
anterior neural tube1.36e-2140
regional part of forebrain1.09e-2039
forebrain1.09e-2039
future forebrain1.09e-2039
cerebral cortex2.15e-1821
cerebral hemisphere2.15e-1821
pallium2.15e-1821
structure with developmental contribution from neural crest2.20e-1592
regional part of cerebral cortex5.34e-1517
occipital lobe3.05e-1310
visual cortex3.05e-1310
neocortex3.05e-1310
basal ganglion2.45e-098
nuclear complex of neuraxis2.45e-098
aggregate regional part of brain2.45e-098
collection of basal ganglia2.45e-098
cerebral subcortex2.45e-098
posterior neural tube7.02e-0812
chordal neural plate7.02e-0812
spinal cord6.78e-076
dorsal region element6.78e-076
dorsum6.78e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:25912112..25912133,-&oldid=4289272"