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FFCP PHASE1:Mm9::chr18:31607002..31607030,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20983
|EntrezGene=20983
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P40749,Q571C5
|UniProt=P40749,Q571C5
|association_with_transcript=38bp_to_ENSMUST00000025110,NM_009308,uc008ehy.1_5end
|association_with_transcript=38bp_to_ENSMUST00000025110,NM_009308,uc008ehy.1_5end
|cluster_id=chr18:31607002..31607030,-
|description=CAGE_peak_1_at_Syt4_5end
|description=CAGE_peak_1_at_Syt4_5end
|id=chr18:31607002..31607030,-
|id=chr18:31607002..31607030,-
|ontology_enrichment_celltype=CL:0000540!5.59e-16!33;CL:0000047!5.59e-16!33;CL:0000031!5.59e-16!33;CL:0000404!5.59e-16!33;CL:0000221!7.90e-14!44;CL:0000133!7.90e-14!44;CL:0002319!9.27e-14!43;CL:0000117!4.62e-13!23;CL:0000337!4.62e-13!23;CL:0000393!8.19e-11!39;CL:0000211!8.19e-11!39;CL:0000055!3.25e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.29e-18,33;CL:0000047,2.29e-18,33;CL:0000031,2.29e-18,33;CL:0000404,2.29e-18,33;CL:0000117,5.78e-15,23;CL:0000337,5.78e-15,23;CL:0000221,7.16e-15,44;CL:0000133,7.16e-15,44;CL:0002319,8.77e-15,43;CL:0000393,2.24e-13,39;CL:0000211,2.24e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.50e-35!102;UBERON:0000924!3.50e-35!102;UBERON:0006601!3.50e-35!102;UBERON:0000073!1.45e-32!75;UBERON:0001016!1.45e-32!75;UBERON:0001017!5.34e-31!73;UBERON:0005743!5.34e-31!73;UBERON:0002346!7.26e-31!71;UBERON:0003075!7.26e-31!71;UBERON:0007284!7.26e-31!71;UBERON:0000033!1.81e-25!63;UBERON:0001049!6.98e-25!52;UBERON:0005068!6.98e-25!52;UBERON:0006241!6.98e-25!52;UBERON:0007135!6.98e-25!52;UBERON:0000955!1.18e-23!50;UBERON:0006238!1.18e-23!50;UBERON:0002616!4.34e-23!49;UBERON:0003056!1.18e-21!49;UBERON:0003080!9.60e-19!40;UBERON:0002020!3.27e-18!34;UBERON:0002780!5.18e-18!39;UBERON:0001890!5.18e-18!39;UBERON:0006240!5.18e-18!39;UBERON:0002791!2.12e-15!29;UBERON:0003528!2.12e-15!29;UBERON:0001893!2.12e-15!29;UBERON:0007811!1.24e-12!86;UBERON:0000956!6.82e-11!21;UBERON:0001869!6.82e-11!21;UBERON:0000203!6.82e-11!21;UBERON:0000153!1.17e-10!94;UBERON:0002619!6.79e-09!17;UBERON:0002021!4.88e-08!10;UBERON:0000411!4.88e-08!10;UBERON:0001950!4.88e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.21e-38,95;UBERON:0000924,9.21e-38,95;UBERON:0006601,9.21e-38,95;UBERON:0001016,1.86e-36,75;UBERON:0001017,1.20e-34,73;UBERON:0002346,1.99e-32,64;UBERON:0003075,1.99e-32,64;UBERON:0007284,1.99e-32,64;UBERON:0010371,1.73e-31,73;UBERON:0000073,1.76e-28,54;UBERON:0001049,5.01e-27,52;UBERON:0005068,5.01e-27,52;UBERON:0006241,5.01e-27,52;UBERON:0007135,5.01e-27,52;UBERON:0003056,1.03e-24,49;UBERON:0000955,1.89e-23,47;UBERON:0006238,1.89e-23,47;UBERON:0002616,8.24e-23,46;UBERON:0003080,2.58e-21,40;UBERON:0010314,4.18e-21,92;UBERON:0002020,1.12e-20,34;UBERON:0002780,1.83e-20,39;UBERON:0001890,1.83e-20,39;UBERON:0006240,1.83e-20,39;UBERON:0003528,2.11e-17,29;UBERON:0002791,2.11e-17,29;UBERON:0001893,2.11e-17,29;UBERON:0000956,3.67e-12,21;UBERON:0001869,3.67e-12,21;UBERON:0000203,3.67e-12,21;UBERON:0002619,7.71e-10,17;UBERON:0002021,4.12e-09,10;UBERON:0000411,4.12e-09,10;UBERON:0001950,4.12e-09,10
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7035931074359,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,77.2848880483664,80.406628849349,50.7065122804943,0,0,0,0,0,1.49800055259202,1.15265491596466,37.328260431052,38.8817102395269,33.8623187775725,41.4193927385515,35.3389665522582,60.7554364106172,39.4883340595134,34.0110951045708,79.2834343195599,76.6124028511126,88.938182755365,48.7979264601717,59.0095301235542,57.3004707612436,80.4047037123977,81.0378158445619,80.8302730739325,87.5046898856793,77.5925660355111,99.5373040707105,89.3569081331572,116.153487884129,0,0,0,0,0.649776417447669,0,5.47733238513832,0,0,0,2.95771181531029,0,0,0,0,0,0,4.79572294820052,0,13.5082346548991,3.64319186208885,10.6562917409249,9.22461989024234,14.9215414147096,17.0503625346772,4.39833069653864,0,1.73519228303894,0,0,0,0,0,147.56152169382,175.935233723302,1.02182822083437,0,0,0,117.735442572191,88.7551169468135,95.6229619578898,123.936740297093,120.186264945255,103.062870101542,85.5011456367083,0.101839363850316,0,0,16.2040229032585,1.95180664444056,12.4147136394075,18.3663372401456,29.2367346601287,30.9566071138542,30.1067242669397,22.7695190680141,32.337921342377,0,0.189106080167819,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0.822799249567402,0.492502392237286,0.0810688095458557,0.146199987425332,0,0.134206418760372,76.1249613802141,171.644893448646,0,1.85115396664481,0.639864751605702,0.928946687441754,0.515469845288373,1.00841762311671,0.889512175379481,1.14135375667535,0.949058123089023,2.14108641141214,2.5133520880027,0.795825888164603,1.36474860983384,0.898819408654221,1.51296634912286,1.1948476395262,0.189667900953082,1.5994791765362,0,0.407302655690628,0.775809948670503,0.420814919341911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.339490171550376,0.469380496577004,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,102.752377592187,92.2455973480639,0,0,23.0321000173867,22.2550084249084,42.6538327510942,26.7645053706858,43.2229427719845,47.8399337033127,5.26253912177363,13.4437694639203,18.9738133414331,52.0540532603327,0.141940085208269,0,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,0,120.515620436841,3.78128297465751,1.03486947026204,3.64372959553707,6.91626911204867,13.0209236849512,19.7458824722545,14.6143175575008,0,0,8.82113592219848,2.80306630000516,2.9063596805263,6.45348296731268,7.16234064018819,7.71462228801788,0.582961673259701,87.1498919449396,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.316335993581135,0.406638934253697,0.972048067396211,1.46361807210128,1.31017538247707,1.75323650300267,2.0663363931334,0,1.42576470620972,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,3.47741269257943,0,0,1.07184189539533,0,114.644624051265,98.0492753760287,114.00620717444,94.1755439243408,95.9115527678899,77.8055714311392,104.62848753593,117.984155244746,128.692444151514,112.353987650145,3.84013186061454,12.369771075432,12.6342868258059,11.6691224192781,13.8344687334468,17.4651333027513,17.7797382241292,17.512979865306,24.7107791385698,19.7103825175762,21.2922611907801,20.1830185283102,23.6913013898803,22.6008787989189,22.3423974237336,20.0043350338891,18.7732608030666,17.3618298417335,19.3680373377554,18.6942628570685,14.7433778525729,20.7646693206425,17.8827142460491,21.0752304116876,20.6099543109574,20.5613497176774,16.097661612804,19.2040889349625,20.9138335322627,15.7119836064167,18.2697927911228,15.2681947682123,16.3692417267876,17.3529262128282,14.2750892126045,40.7191242038852,11.462648813825,16.9748132698156,7.07766828654721,3.52946270591225,4.63735671240843
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7035931074359,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,77.2848880483664,80.406628849349,50.7065122804943,0,0,0,0,0,1.49800055259202,1.15265491596466,37.328260431052,38.8817102395269,33.8623187775725,41.4193927385515,35.3389665522582,60.7554364106172,39.4883340595134,34.0110951045708,79.2834343195599,76.6124028511126,88.938182755365,48.7979264601717,59.0095301235542,57.3004707612436,80.4047037123977,81.0378158445619,80.8302730739325,87.5046898856793,77.5925660355111,99.5373040707105,89.3569081331572,116.153487884129,0,0,0,0,0.649776417447669,0,5.47733238513832,0,0,0,2.95771181531029,0,0,0,0,0,0,4.79572294820052,0,13.5082346548991,3.64319186208885,10.6562917409249,9.22461989024234,14.9215414147096,17.0503625346772,4.39833069653864,0,1.73519228303894,0,0,0,0,0,147.56152169382,175.935233723302,1.02182822083437,0,0,0,117.735442572191,88.7551169468135,95.6229619578898,123.936740297093,120.186264945255,103.062870101542,85.5011456367083,0.101839363850316,0,0,16.2040229032585,1.95180664444056,12.4147136394075,18.3663372401456,29.2367346601287,30.9566071138542,30.1067242669397,22.7695190680141,32.337921342377,0,0.189106080167819,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0.822799249567402,0.492502392237286,0.0810688095458557,0.146199987425332,0,0.134206418760372,76.1249613802141,171.644893448646,0,1.85115396664481,0.639864751605702,0.928946687441754,0.515469845288373,1.00841762311671,0.889512175379481,1.14135375667535,0.949058123089023,2.14108641141214,2.5133520880027,0.795825888164603,1.36474860983384,0.898819408654221,1.51296634912286,1.1948476395262,0.189667900953082,1.5994791765362,0,0.407302655690628,0.775809948670503,0.420814919341911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.339490171550376,0.469380496577004,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,102.752377592187,92.2455973480639,0,0,23.0321000173867,22.2550084249084,42.6538327510942,26.7645053706858,43.2229427719845,47.8399337033127,5.26253912177363,13.4437694639203,18.9738133414331,52.0540532603327,0.141940085208269,0,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,0,120.515620436841,3.78128297465751,1.03486947026204,3.64372959553707,6.91626911204867,13.0209236849512,19.7458824722545,14.6143175575008,0,0,8.82113592219848,2.80306630000516,2.9063596805263,6.45348296731268,7.16234064018819,7.71462228801788,0.582961673259701,87.1498919449396,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.316335993581135,0.406638934253697,0.972048067396211,1.46361807210128,1.31017538247707,1.75323650300267,2.0663363931334,0,1.42576470620972,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,3.47741269257943,0,0,1.07184189539533,0,114.644624051265,98.0492753760287,114.00620717444,94.1755439243408,95.9115527678899,77.8055714311392,104.62848753593,117.984155244746,128.692444151514,112.353987650145,3.84013186061454,12.369771075432,12.6342868258059,11.6691224192781,13.8344687334468,17.4651333027513,17.7797382241292,17.512979865306,24.7107791385698,19.7103825175762,21.2922611907801,20.1830185283102,23.6913013898803,22.6008787989189,22.3423974237336,20.0043350338891,18.7732608030666,17.3618298417335,19.3680373377554,18.6942628570685,14.7433778525729,20.7646693206425,17.8827142460491,21.0752304116876,20.6099543109574,20.5613497176774,16.097661612804,19.2040889349625,20.9138335322627,15.7119836064167,18.2697927911228,15.2681947682123,16.3692417267876,17.3529262128282,14.2750892126045,40.7191242038852,11.462648813825,16.9748132698156,7.07766828654721,3.52946270591225,4.63735671240843
|short_description=p1@Syt4
|short_description=p1@Syt4
}}
}}

Latest revision as of 03:16, 27 September 2015

Short description:p1@Syt4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Syt4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 38bp_to_ENSMUST00000025110, NM_009308, uc008ehy.1_5end
EntrezGene:Syt4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Syt4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C377.28
Mouse Granule cells, donor2.CNhs12357.11731-123E380.41
Mouse Granule cells, donor3.CNhs12108.11636-122C750.71
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.86
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D260.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F239.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D379.28
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F376.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D788.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D448.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F459.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D857.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E480.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E581.04
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I680.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D687.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F677.59
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E199.54
Mouse Schwann, donor1.CNhs12507.11728-123D989.36
Mouse Schwann, donor2.CNhs12573.11746-123F9116.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D713.51
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D610.66
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F514.92
adrenal gland, neonate N00.CNhs11191.1311-23C117.05
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2147.56
cerebellum, neonate N30.CNhs11135.1395-42I2175.94
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4117.74
corpus striatum, adult.CNhs10487.19-21D888.76
corpus striatum, neonate N00.CNhs11226.630-43F195.62
cortex, adult.CNhs10473.12-14D5123.94
cortex, neonate N30.CNhs11107.1392-42F2120.19
diencephalon, adult.CNhs10482.20-12F2103.06
diencephalon, neonate N30.CNhs11201.1388-42B285.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E212.41
eyeball, embryo E15.CNhs10593.426-16C918.37
eyeball, embryo E17.CNhs11023.1261-18D429.24
eyeball, neonate N00.CNhs11207.633-15C630.96
eyeball, neonate N01.CNhs11140.1532-43E730.11
eyeball, neonate N02.CNhs11205.1551-44G822.77
eyeball, neonate N16.CNhs11188.777-19A232.34
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E876.12
hippocampus, neonate N00.CNhs11228.627-43G1171.64
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2102.75
medulla oblongata, neonate N30.CNhs11200.1396-42A392.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E342.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D843.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D947.84
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I952.05
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G8120.52
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B96.92
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F519.75
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H36.45
skin, neonate N06.CNhs11097.693-20I57.16
skin, neonate N10.CNhs11108.762-6C47.71
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C987.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1114.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A298.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3114.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D794.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A495.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A577.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6104.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7117.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8128.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9112.35
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H212.63
whole body, embryo E14.5.CNhs10578.420-27D211.67
whole body, embryo E14.CNhs10519.395-14B113.83
whole body, embryo E16.CNhs10514.453-14F217.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.29
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.08
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.35
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I540.72
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.29e-1833
neuronal stem cell2.29e-1833
neuroblast2.29e-1833
electrically signaling cell2.29e-1833
CNS neuron (sensu Vertebrata)5.78e-1523
neuroblast (sensu Vertebrata)5.78e-1523
ectodermal cell7.16e-1544
neurectodermal cell7.16e-1544
neural cell8.77e-1543
electrically responsive cell2.24e-1339
electrically active cell2.24e-1339

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.21e-3895
ectoderm9.21e-3895
presumptive ectoderm9.21e-3895
nervous system1.86e-3675
central nervous system1.20e-3473
neurectoderm1.99e-3264
neural plate1.99e-3264
presumptive neural plate1.99e-3264
ecto-epithelium1.73e-3173
regional part of nervous system1.76e-2854
neural tube5.01e-2752
neural rod5.01e-2752
future spinal cord5.01e-2752
neural keel5.01e-2752
pre-chordal neural plate1.03e-2449
brain1.89e-2347
future brain1.89e-2347
regional part of brain8.24e-2346
anterior neural tube2.58e-2140
structure with developmental contribution from neural crest4.18e-2192
gray matter1.12e-2034
regional part of forebrain1.83e-2039
forebrain1.83e-2039
future forebrain1.83e-2039
brain grey matter2.11e-1729
regional part of telencephalon2.11e-1729
telencephalon2.11e-1729
cerebral cortex3.67e-1221
cerebral hemisphere3.67e-1221
pallium3.67e-1221
regional part of cerebral cortex7.71e-1017
occipital lobe4.12e-0910
visual cortex4.12e-0910
neocortex4.12e-0910
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