FFCP PHASE1:Mm9::chr18:65048430..65048437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:65048430..65048437,- | |||
|description=CAGE_peak_at_chr18:65048430..65048437,- | |description=CAGE_peak_at_chr18:65048430..65048437,- | ||
|id=chr18:65048430..65048437,- | |id=chr18:65048430..65048437,- | ||
|ontology_enrichment_celltype=CL:0002609!7.54e-19!6;CL:0000117!8.37e-17!23;CL:0000337!8.37e-17!23;CL:0000540!6.19e-11!33;CL:0000047!6.19e-11!33;CL:0000031!6.19e-11!33;CL:0000404!6.19e-11!33;CL:0002608!3.87e-10!3;CL:0000221!6.22e-09!44;CL:0000133!6.22e-09!44;CL:0000393!7.27e-09!39;CL:0000211!7.27e-09!39;CL:0002319!8.25e-08!43;CL:0002611!9.20e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.92e-39,6;CL:0000117,2.72e-16,23;CL:0000337,2.72e-16,23;CL:0000540,1.68e-11,33;CL:0000047,1.68e-11,33;CL:0000031,1.68e-11,33;CL:0000404,1.68e-11,33;CL:0000393,8.49e-10,39;CL:0000211,8.49e-10,39;CL:0002319,6.37e-09,43;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.93e-15!34;UBERON:0001049!5.71e-13!52;UBERON:0005068!5.71e-13!52;UBERON:0006241!5.71e-13!52;UBERON:0007135!5.71e-13!52;UBERON:0001954!6.01e-11!7;UBERON:0003022!6.01e-11!7;UBERON:0002421!6.01e-11!7;UBERON:0000349!6.01e-11!7;UBERON:0002600!6.01e-11!7;UBERON:0002791!7.21e-11!29;UBERON:0003528!7.21e-11!29;UBERON:0001893!7.21e-11!29;UBERON:0002616!1.07e-10!49;UBERON:0001017!1.08e-10!73;UBERON:0005743!1.08e-10!73;UBERON:0000956!1.41e-10!21;UBERON:0001869!1.41e-10!21;UBERON:0000203!1.41e-10!21;UBERON:0000955!2.05e-10!50;UBERON:0006238!2.05e-10!50;UBERON:0000073!2.70e-10!75;UBERON:0001016!2.70e-10!75;UBERON:0003080!3.33e-10!40;UBERON:0000033!5.67e-10!63;UBERON:0002346!1.23e-09!71;UBERON:0003075!1.23e-09!71;UBERON:0007284!1.23e-09!71;UBERON:0003056!4.28e-09!49;UBERON:0002780!5.93e-09!39;UBERON:0001890!5.93e-09!39;UBERON:0006240!5.93e-09!39;UBERON:0004121!2.82e-08!102;UBERON:0000924!2.82e-08!102;UBERON:0006601!2.82e-08!102;UBERON:0002256!9.20e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,7.93e-18,21;UBERON:0001869,7.93e-18,21;UBERON:0000203,7.93e-18,21;UBERON:0003528,4.74e-13,29;UBERON:0002791,4.74e-13,29;UBERON:0001893,4.74e-13,29;UBERON:0002020,3.37e-11,34;UBERON:0000073,4.19e-10,54;UBERON:0002780,8.12e-10,39;UBERON:0001890,8.12e-10,39;UBERON:0006240,8.12e-10,39;UBERON:0003080,1.40e-09,40;UBERON:0001954,2.37e-09,7;UBERON:0003022,2.37e-09,7;UBERON:0002421,2.37e-09,7;UBERON:0000349,2.37e-09,7;UBERON:0002600,2.37e-09,7;UBERON:0002616,2.22e-08,46;UBERON:0000955,3.29e-08,47;UBERON:0006238,3.29e-08,47;UBERON:0003056,6.88e-08,49;UBERON:0001017,1.48e-07,73;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,1.34796496001021,1.4850653216486,1.47227472945967,0.285650984403804,0.220868540951614,0.489963196859816,0.479227355091182,1.83843757322004,1.10115880999389,0,0,0,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,1.34796496001021,1.4850653216486,1.47227472945967,0.285650984403804,0.220868540951614,0.489963196859816,0.479227355091182,1.83843757322004,1.10115880999389,0,0,0,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:65048430..65048437,- | |short_description=p@chr18:65048430..65048437,- | ||
}} | }} |
Latest revision as of 00:36, 6 August 2015
Short description: | p@chr18:65048430..65048437, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:65048430..65048437, - |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.92e-39 | 6 |
CNS neuron (sensu Vertebrata) | 2.72e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-16 | 23 |
neuron | 1.68e-11 | 33 |
neuronal stem cell | 1.68e-11 | 33 |
neuroblast | 1.68e-11 | 33 |
electrically signaling cell | 1.68e-11 | 33 |
electrically responsive cell | 8.49e-10 | 39 |
electrically active cell | 8.49e-10 | 39 |
neural cell | 6.37e-09 | 43 |
ectodermal cell | 9.96e-09 | 44 |
neurectodermal cell | 9.96e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 7.93e-18 | 21 |
cerebral hemisphere | 7.93e-18 | 21 |
pallium | 7.93e-18 | 21 |
brain grey matter | 4.74e-13 | 29 |
regional part of telencephalon | 4.74e-13 | 29 |
telencephalon | 4.74e-13 | 29 |
gray matter | 3.37e-11 | 34 |
regional part of nervous system | 4.19e-10 | 54 |
regional part of forebrain | 8.12e-10 | 39 |
forebrain | 8.12e-10 | 39 |
future forebrain | 8.12e-10 | 39 |
anterior neural tube | 1.40e-09 | 40 |
Ammon's horn | 2.37e-09 | 7 |
lobe parts of cerebral cortex | 2.37e-09 | 7 |
hippocampal formation | 2.37e-09 | 7 |
limbic system | 2.37e-09 | 7 |
limbic lobe | 2.37e-09 | 7 |
regional part of brain | 2.22e-08 | 46 |
brain | 3.29e-08 | 47 |
future brain | 3.29e-08 | 47 |
pre-chordal neural plate | 6.88e-08 | 49 |
central nervous system | 1.48e-07 | 73 |
neural tube | 1.88e-07 | 52 |
neural rod | 1.88e-07 | 52 |
future spinal cord | 1.88e-07 | 52 |
neural keel | 1.88e-07 | 52 |
nervous system | 2.31e-07 | 75 |