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FFCP PHASE1:Mm9::chr18:77803850..77803901,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225743
|EntrezGene=225743
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9QAU8
|UniProt=E9QAU8
|association_with_transcript=0bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end
|association_with_transcript=0bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end
|cluster_id=chr18:77803850..77803901,-
|description=CAGE_peak_3_at_Rnf165_5end
|description=CAGE_peak_3_at_Rnf165_5end
|id=chr18:77803850..77803901,-
|id=chr18:77803850..77803901,-
|ontology_enrichment_celltype=CL:0000540!5.28e-17!33;CL:0000047!5.28e-17!33;CL:0000031!5.28e-17!33;CL:0000404!5.28e-17!33;CL:0000117!1.87e-13!23;CL:0000337!1.87e-13!23;CL:0002319!2.16e-12!43;CL:0000221!2.66e-12!44;CL:0000133!2.66e-12!44;CL:0000393!1.64e-11!39;CL:0000211!1.64e-11!39;CL:0000055!3.85e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-22,33;CL:0000047,1.30e-22,33;CL:0000031,1.30e-22,33;CL:0000404,1.30e-22,33;CL:0000117,1.56e-18,23;CL:0000337,1.56e-18,23;CL:0000393,2.78e-17,39;CL:0000211,2.78e-17,39;CL:0002319,1.68e-15,43;CL:0000221,6.97e-15,44;CL:0000133,6.97e-15,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.70e-32!102;UBERON:0000924!3.70e-32!102;UBERON:0006601!3.70e-32!102;UBERON:0002346!3.76e-30!71;UBERON:0003075!3.76e-30!71;UBERON:0007284!3.76e-30!71;UBERON:0001017!7.47e-30!73;UBERON:0005743!7.47e-30!73;UBERON:0000073!1.95e-28!75;UBERON:0001016!1.95e-28!75;UBERON:0000033!1.30e-27!63;UBERON:0003056!1.85e-24!49;UBERON:0001049!1.36e-23!52;UBERON:0005068!1.36e-23!52;UBERON:0006241!1.36e-23!52;UBERON:0007135!1.36e-23!52;UBERON:0000955!2.64e-23!50;UBERON:0006238!2.64e-23!50;UBERON:0002616!1.36e-22!49;UBERON:0002020!8.87e-21!34;UBERON:0003080!2.90e-20!40;UBERON:0002780!1.09e-19!39;UBERON:0001890!1.09e-19!39;UBERON:0006240!1.09e-19!39;UBERON:0002791!1.59e-18!29;UBERON:0003528!1.59e-18!29;UBERON:0001893!1.59e-18!29;UBERON:0000956!2.97e-14!21;UBERON:0001869!2.97e-14!21;UBERON:0000203!2.97e-14!21;UBERON:0000153!9.45e-14!94;UBERON:0007811!1.08e-13!86;UBERON:0002619!1.45e-11!17;UBERON:0002021!1.55e-08!10;UBERON:0000411!1.55e-08!10;UBERON:0001950!1.55e-08!10;UBERON:0000468!1.97e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-35,73;UBERON:0004121,1.51e-35,95;UBERON:0000924,1.51e-35,95;UBERON:0006601,1.51e-35,95;UBERON:0002346,1.22e-34,64;UBERON:0003075,1.22e-34,64;UBERON:0007284,1.22e-34,64;UBERON:0001016,4.95e-34,75;UBERON:0010371,5.74e-29,73;UBERON:0000073,3.29e-28,54;UBERON:0003056,1.34e-27,49;UBERON:0002020,1.71e-26,34;UBERON:0001049,3.43e-26,52;UBERON:0005068,3.43e-26,52;UBERON:0006241,3.43e-26,52;UBERON:0007135,3.43e-26,52;UBERON:0003528,2.99e-23,29;UBERON:0002791,2.99e-23,29;UBERON:0001893,2.99e-23,29;UBERON:0000955,3.24e-23,47;UBERON:0006238,3.24e-23,47;UBERON:0002616,2.75e-22,46;UBERON:0003080,9.33e-22,40;UBERON:0002780,5.67e-21,39;UBERON:0001890,5.67e-21,39;UBERON:0006240,5.67e-21,39;UBERON:0010314,1.60e-19,92;UBERON:0000956,3.77e-17,21;UBERON:0001869,3.77e-17,21;UBERON:0000203,3.77e-17,21;UBERON:0002619,2.24e-13,17;UBERON:0002021,1.63e-11,10;UBERON:0000411,1.63e-11,10;UBERON:0001950,1.63e-11,10;UBERON:0002420,3.24e-07,8;UBERON:0007245,3.24e-07,8;UBERON:0010009,3.24e-07,8;UBERON:0010011,3.24e-07,8;UBERON:0000454,3.24e-07,8
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.972149495371417,0,0,0,0,0,0,0,0,5.86717736492834,6.87688273053643,5.07065122804943,0,0,0,0,0,0,1.15265491596466,9.95420278161385,9.04539786822327,7.99234853135252,1.71390590642282,3.75476519617743,8.45186514583183,8.53024692062304,4.5960939330501,4.40463523997555,7.2781782708557,6.60508093001847,8.30883612700221,6.67859798297591,7.29278718779464,3.35019598801657,1.68828783009504,3.97275444219706,2.65165726926301,2.84743361598206,4.47358669980721,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,1.63286352971307,1.04091196059682,0.608930956624282,0.461230994512117,0.904335843315735,0.470354828542819,0.628332956648377,0,0.578397427679647,0,0.647067399789637,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,4.94309110035915,6.8625090422794,5.78010019719176,19.9897968221118,15.0872119824895,6.85700547046548,10.5456820994042,0.407357455401265,0,0,1.26265113531884,1.56144531555244,1.37941262660084,2.70093194708024,4.67184935290717,5.57899293040888,7.68682321709099,5.80950692270319,3.88055056108524,0,0.189106080167819,0.527853372491847,0.876782929710299,0.556094498451196,0.696504333044333,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.771335564436891,0,0.536546802799238,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,24.6039239820029,9.77593817603202,0,0,0.213288250535234,1.39342003116263,1.15980715189884,0.403367049246685,0,0.760902504450237,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.775809948670503,0.280543279561274,1.01178459398812,0.147610147979602,0.31399745568275,0,0,0.500535317148282,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.472905432318573,0,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,2.24770825982909,2.93029216480508,0,0.252470927204373,3.15508219416257,3.12350995437311,2.80050417052639,1.67278158566786,1.78238939265915,2.26461224631066,2.02405350837447,2.63030272120181,2.76701444562566,9.63963949265421,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,0.316036757935816,0,0,0.680879211507576,1.8006109403131,1.4229455216103,1.07168517515796,0.354680467284547,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0,1.6488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,1.8542530201051,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.813277868507395,0.432021363287205,0.209088296014469,0,0,0.578574190077352,0,0,1.86401793926078,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,18.0720589637461,19.3336599333014,23.4887160510153,20.9660882459299,19.182310553578,13.5970901530146,12.1504050041725,12.158672487054,14.9536994964788,18.1216109113137,2.69847103718859,3.59122386060928,2.39027048055788,0.729320151204882,1.67690530102386,0.919217542250071,2.00022055021454,1.23621034343337,1.92551525755089,1.51618327058278,2.02783439912192,1.69763707247469,1.40462261204824,1.85672941974121,1.43588672389033,2.38146845641537,1.97003354106254,1.54327376370964,2.06042950401653,1.47198920134397,0.685738504770831,1.06485483695602,1.43061713968393,1.30811774969096,1.12931256498397,1.94613598150856,1.46342378298218,1.31534855718921,0.950628796921032,0.561142271657738,1.06771516311757,0.985044823755635,1.22769312950907,1.54936841185966,1.15743966588685,2.49810577937946,0.935726433781634,1.71896843238639,0.57386499620653,0.441182838239031,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.972149495371417,0,0,0,0,0,0,0,0,5.86717736492834,6.87688273053643,5.07065122804943,0,0,0,0,0,0,1.15265491596466,9.95420278161385,9.04539786822327,7.99234853135252,1.71390590642282,3.75476519617743,8.45186514583183,8.53024692062304,4.5960939330501,4.40463523997555,7.2781782708557,6.60508093001847,8.30883612700221,6.67859798297591,7.29278718779464,3.35019598801657,1.68828783009504,3.97275444219706,2.65165726926301,2.84743361598206,4.47358669980721,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,1.63286352971307,1.04091196059682,0.608930956624282,0.461230994512117,0.904335843315735,0.470354828542819,0.628332956648377,0,0.578397427679647,0,0.647067399789637,0,0,0,1.75668478206928,1.67557365450764,0,0,0,0,4.94309110035915,6.8625090422794,5.78010019719176,19.9897968221118,15.0872119824895,6.85700547046548,10.5456820994042,0.407357455401265,0,0,1.26265113531884,1.56144531555244,1.37941262660084,2.70093194708024,4.67184935290717,5.57899293040888,7.68682321709099,5.80950692270319,3.88055056108524,0,0.189106080167819,0.527853372491847,0.876782929710299,0.556094498451196,0.696504333044333,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.771335564436891,0,0.536546802799238,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,24.6039239820029,9.77593817603202,0,0,0.213288250535234,1.39342003116263,1.15980715189884,0.403367049246685,0,0.760902504450237,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.775809948670503,0.280543279561274,1.01178459398812,0.147610147979602,0.31399745568275,0,0,0.500535317148282,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.814824882210129,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.472905432318573,0,0.637819074629948,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,2.24770825982909,2.93029216480508,0,0.252470927204373,3.15508219416257,3.12350995437311,2.80050417052639,1.67278158566786,1.78238939265915,2.26461224631066,2.02405350837447,2.63030272120181,2.76701444562566,9.63963949265421,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,0.316036757935816,0,0,0.680879211507576,1.8006109403131,1.4229455216103,1.07168517515796,0.354680467284547,0.713475270408282,0.493647061806363,0.608929898229199,0,0,0,1.6488625294148,0.322928853391811,0.301564624640779,0.119372344003136,0,0,1.8542530201051,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.474503990371703,0.813277868507395,0.432021363287205,0.209088296014469,0,0,0.578574190077352,0,0,1.86401793926078,0,0.448549638131936,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.183151624267265,0,0,18.0720589637461,19.3336599333014,23.4887160510153,20.9660882459299,19.182310553578,13.5970901530146,12.1504050041725,12.158672487054,14.9536994964788,18.1216109113137,2.69847103718859,3.59122386060928,2.39027048055788,0.729320151204882,1.67690530102386,0.919217542250071,2.00022055021454,1.23621034343337,1.92551525755089,1.51618327058278,2.02783439912192,1.69763707247469,1.40462261204824,1.85672941974121,1.43588672389033,2.38146845641537,1.97003354106254,1.54327376370964,2.06042950401653,1.47198920134397,0.685738504770831,1.06485483695602,1.43061713968393,1.30811774969096,1.12931256498397,1.94613598150856,1.46342378298218,1.31534855718921,0.950628796921032,0.561142271657738,1.06771516311757,0.985044823755635,1.22769312950907,1.54936841185966,1.15743966588685,2.49810577937946,0.935726433781634,1.71896843238639,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p3@Rnf165
|short_description=p3@Rnf165
}}
}}

Latest revision as of 18:04, 1 October 2015

Short description:p3@Rnf165
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf165_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000026494, NM_001164504, uc008frj.2, uc008frm.2_5end
EntrezGene:Rnf165
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rnf165

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E77.69
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E824.60
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.30e-2233
neuronal stem cell1.30e-2233
neuroblast1.30e-2233
electrically signaling cell1.30e-2233
CNS neuron (sensu Vertebrata)1.56e-1823
neuroblast (sensu Vertebrata)1.56e-1823
electrically responsive cell2.78e-1739
electrically active cell2.78e-1739
neural cell1.68e-1543
ectodermal cell6.97e-1544
neurectodermal cell6.97e-1544

Uber anatomy
Ontology termp-valuen
central nervous system1.39e-3573
ectoderm-derived structure1.51e-3595
ectoderm1.51e-3595
presumptive ectoderm1.51e-3595
neurectoderm1.22e-3464
neural plate1.22e-3464
presumptive neural plate1.22e-3464
nervous system4.95e-3475
ecto-epithelium5.74e-2973
regional part of nervous system3.29e-2854
pre-chordal neural plate1.34e-2749
gray matter1.71e-2634
neural tube3.43e-2652
neural rod3.43e-2652
future spinal cord3.43e-2652
neural keel3.43e-2652
brain grey matter2.99e-2329
regional part of telencephalon2.99e-2329
telencephalon2.99e-2329
brain3.24e-2347
future brain3.24e-2347
regional part of brain2.75e-2246
anterior neural tube9.33e-2240
regional part of forebrain5.67e-2139
forebrain5.67e-2139
future forebrain5.67e-2139
structure with developmental contribution from neural crest1.60e-1992
cerebral cortex3.77e-1721
cerebral hemisphere3.77e-1721
pallium3.77e-1721
regional part of cerebral cortex2.24e-1317
occipital lobe1.63e-1110
visual cortex1.63e-1110
neocortex1.63e-1110
basal ganglion3.24e-078
nuclear complex of neuraxis3.24e-078
aggregate regional part of brain3.24e-078
collection of basal ganglia3.24e-078
cerebral subcortex3.24e-078
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