FFCP PHASE1:Mm9::chr18:78118270..78118280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:78118270..78118280,+ | |||
|description=CAGE_peak_at_chr18:78118270..78118280,+ | |description=CAGE_peak_at_chr18:78118270..78118280,+ | ||
|id=chr18:78118270..78118280,+ | |id=chr18:78118270..78118280,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.71e-20,6;CL:0000677,1.71e-20,6;CL:0000584,1.71e-20,6;CL:0000075,1.28e-17,7;CL:0002563,8.85e-14,9;CL:0002251,8.85e-14,9;CL:0000066,1.42e-10,25;CL:0000223,1.89e-09,20;CL:0002076,2.26e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.01e-11!43;UBERON:0000344!6.17e-09!15;UBERON:0005409!6.67e-09!59;UBERON:0004119!1.36e-08!130;UBERON:0000925!1.36e-08!130;UBERON:0006595!1.36e-08!130;UBERON:0001007!3.04e-08!128;UBERON:0001555!3.04e-08!128;UBERON:0007026!3.04e-08!128;UBERON:0004921!3.26e-07!126;UBERON:0004185!3.26e-07!126;UBERON:0001242!4.90e-07!13;UBERON:0000060!4.90e-07!13;UBERON:0001262!4.90e-07!13;UBERON:0004786!4.90e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.80e-23,31;UBERON:0001242,1.64e-20,13;UBERON:0001262,1.64e-20,13;UBERON:0004786,1.64e-20,13;UBERON:0000344,9.25e-18,15;UBERON:0005409,7.72e-15,47;UBERON:0003350,8.85e-14,9;UBERON:0004808,8.85e-14,9;UBERON:0001277,8.85e-14,9;UBERON:0000485,2.50e-11,11;UBERON:0004923,5.01e-11,24;UBERON:0004921,7.27e-07,114;UBERON:0001007,9.99e-07,116;UBERON:0001555,9.99e-07,116;UBERON:0007026,9.99e-07,116 | |||
|phase1_expression=0,1.74487703819681,3.18499467572675,10.5862473957391,10.0179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,1.72269589234506,0.86152399231815,0.861884930743556,1.14014051673824,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,2.90895623329899,0,0,0.257734922644187,1.00841762311671,0.667134131534611,0.760902504450237,1.42358718463353,0.658795818896044,0,0,0.19496408711912,0,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0,0.757736633841335,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,3.18499467572675,10.5862473957391,10.0179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,1.72269589234506,0.86152399231815,0.861884930743556,1.14014051673824,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,2.90895623329899,0,0,0.257734922644187,1.00841762311671,0.667134131534611,0.760902504450237,1.42358718463353,0.658795818896044,0,0,0.19496408711912,0,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0,0.757736633841335,0.717589654087649,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:78118270..78118280,+ | |short_description=p@chr18:78118270..78118280,+ | ||
}} | }} |
Latest revision as of 03:56, 6 August 2015
Short description: | p@chr18:78118270..78118280, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:78118270..78118280, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.71e-20 | 6 |
gut absorptive cell | 1.71e-20 | 6 |
enterocyte | 1.71e-20 | 6 |
columnar/cuboidal epithelial cell | 1.28e-17 | 7 |
intestinal epithelial cell | 8.85e-14 | 9 |
epithelial cell of alimentary canal | 8.85e-14 | 9 |
epithelial cell | 1.42e-10 | 25 |
endodermal cell | 1.89e-09 | 20 |
endo-epithelial cell | 2.26e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.80e-23 | 31 |
intestinal mucosa | 1.64e-20 | 13 |
wall of intestine | 1.64e-20 | 13 |
gastrointestinal system mucosa | 1.64e-20 | 13 |
mucosa | 9.25e-18 | 15 |
gastrointestinal system | 7.72e-15 | 47 |
epithelium of mucosa | 8.85e-14 | 9 |
gastrointestinal system epithelium | 8.85e-14 | 9 |
intestinal epithelium | 8.85e-14 | 9 |
simple columnar epithelium | 2.50e-11 | 11 |
organ component layer | 5.01e-11 | 24 |
subdivision of digestive tract | 7.27e-07 | 114 |
digestive system | 9.99e-07 | 116 |
digestive tract | 9.99e-07 | 116 |
primitive gut | 9.99e-07 | 116 |