FFCP PHASE1:Mm9::chr15:43002382..43002400,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239405 | |EntrezGene=239405 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=390 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_uc007vph.1_5end | |association_with_transcript=-10bp_to_uc007vph.1_5end | ||
|cluster_id=chr15:43002382..43002400,- | |||
|description=CAGE_peak_2_at_Rspo2_5end | |description=CAGE_peak_2_at_Rspo2_5end | ||
|id=chr15:43002382..43002400,- | |id=chr15:43002382..43002400,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!6.25e-11!49;UBERON:0000033!1.84e-10!63;UBERON:0002346!1.98e-10!71;UBERON:0003075!1.98e-10!71;UBERON:0007284!1.98e-10!71;UBERON:0001049!1.08e-09!52;UBERON:0005068!1.08e-09!52;UBERON:0006241!1.08e-09!52;UBERON:0007135!1.08e-09!52;UBERON:0002020!2.18e-09!34;UBERON:0004121!6.98e-09!102;UBERON:0000924!6.98e-09!102;UBERON:0006601!6.98e-09!102;UBERON:0001017!1.24e-08!73;UBERON:0005743!1.24e-08!73;UBERON:0000073!2.40e-08!75;UBERON:0001016!2.40e-08!75;UBERON:0003080!4.97e-08!40;UBERON:0002780!6.46e-08!39;UBERON:0001890!6.46e-08!39;UBERON:0006240!6.46e-08!39;UBERON:0002791!9.55e-08!29;UBERON:0003528!9.55e-08!29;UBERON:0001893!9.55e-08!29;UBERON:0002616!2.56e-07!49;UBERON:0000955!2.61e-07!50;UBERON:0006238!2.61e-07!50;UBERON:0002619!2.91e-07!17;UBERON:0002021!6.69e-07!10;UBERON:0000411!6.69e-07!10;UBERON:0001950!6.69e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.37e-12,64;UBERON:0003075,1.37e-12,64;UBERON:0007284,1.37e-12,64;UBERON:0002020,9.71e-12,34;UBERON:0010371,1.45e-11,73;UBERON:0003056,3.61e-11,49;UBERON:0002619,1.12e-10,17;UBERON:0002021,4.67e-10,10;UBERON:0000411,4.67e-10,10;UBERON:0001950,4.67e-10,10;UBERON:0003528,4.83e-10,29;UBERON:0002791,4.83e-10,29;UBERON:0001893,4.83e-10,29;UBERON:0001049,1.15e-09,52;UBERON:0005068,1.15e-09,52;UBERON:0006241,1.15e-09,52;UBERON:0007135,1.15e-09,52;UBERON:0000956,2.46e-09,21;UBERON:0001869,2.46e-09,21;UBERON:0000203,2.46e-09,21;UBERON:0002780,2.00e-08,39;UBERON:0001890,2.00e-08,39;UBERON:0006240,2.00e-08,39;UBERON:0000073,4.39e-08,54;UBERON:0003080,4.77e-08,40;UBERON:0004121,5.12e-08,95;UBERON:0000924,5.12e-08,95;UBERON:0006601,5.12e-08,95;UBERON:0002616,1.70e-07,46;UBERON:0010314,1.74e-07,92;UBERON:0001017,1.98e-07,73;UBERON:0000955,3.44e-07,47;UBERON:0006238,3.44e-07,47;UBERON:0001016,5.48e-07,75 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2263404312402,11.7597240214637,3.67093504323363,0,0,3.51497892375155,3.11087838518853,1.25987779462826,0,0,0,0,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,1.77858959222228,2.2497492932035,1.97773272513395,2.8419204597844,0.299600110518405,0,0,0.810035629990144,0,0.856952953211411,1.76694832761291,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,1.71452174049252,1.28082701043374,1.04182674111352,0.279182999001381,1.12552522006336,0.763991238884051,2.35702868378934,1.28134512719193,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,55.9011458056029,40.0070447088418,42.4007489412408,5.35204995151386,101.377917157311,78.9896243090602,85.3280043783997,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0.461230994512117,0,0.23517741427141,0,0,0.289198713839823,0,0.647067399789637,0,0,0,1.17112318804619,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,1.83000241127451,0.125654352112864,6.25767552692195,5.11430914660661,0.20778804455956,1.94689515681309,0.101839363850316,0.622034853050465,0,0.210441855886474,1.17108398666433,1.60931473103431,0.900310649026746,1.65775299619287,1.83698547708585,1.92170580427275,2.34254311399322,2.32833033665114,1.5089759505299,0.756424320671277,0.703804496655795,0.876782929710299,1.66828349535359,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,1.64168241986767,0,0.946978942340841,0,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,5.88811855979556,2.57261530948211,0,0.264450566663544,0,0.232236671860439,0.77320476793256,0.605050573870028,1.33426826306922,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,5.68474235311454,4.4000543639347,2.37643120085263,2.58159273117352,0.167506257441816,0.714130922658041,0,2.52216230569906,1.55025282754142,2.55127629851979,0.327726629431476,0,0.144649058581512,0,0,0,0,1.28440471990234,0.937693492737625,0,0.252470927204373,0.315508219416257,0,1.29254038639679,0,0.445597348164788,0,0,2.33804686329049,1.18586333383957,0.321321316421807,0.283880170416537,0.178065603667255,0.81443479676788,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,1.98067203434441,0.258717367565509,1.07168517515796,0.354680467284547,0.178368817602071,0.987294123612726,0.304464949114599,0,0,0.661585194164886,0.8244312647074,0.161464426695906,0.663442174209714,0.596861720015682,0.328281799490123,0.874442509889552,2.41052892613663,0,0,0,0,0,0,0,0,0,0,1.26534397432454,2.03319467126849,2.80813886136683,1.67270636811575,1.31017538247707,0.944050424693745,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.651021924219751,0.734015410979976,0,0.288030006257865,0,0.202725215290164,0.513554785824136,0.389762468933385,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,1.50471631210609,1.12950368523413,3.22227665555024,4.58316410751517,1.89038500578056,1.37016503954128,3.7769694869485,6.07520250208625,4.05289082901798,3.62513927187364,3.62432218226274,0.93408612825759,1.99512436700516,1.19513524027894,0.972426868273176,0.838452650511929,0.551530525350042,1.55572709461131,1.44224540067226,0.962757628775446,0.758091635291392,1.52087579934144,1.13175804831646,1.12369808963859,0.89635213366817,0.516919220600519,0.952587382566147,0.811190281613988,1.15745532278223,0.824171801606613,1.03039244094078,1.02860775715625,0.532427418478012,1.1921809497366,0.436039249896986,1.31753132581463,1.01537529470012,1.28049581010941,0.789209134313529,0.950628796921032,1.68342681497322,0.830445126869219,0.492522411877817,1.22769312950907,1.39443157067369,1.15743966588685,1.49886346762768,1.63752125911786,0.644613162144895,2.29545998482612,0.882365676478062,0 | |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2263404312402,11.7597240214637,3.67093504323363,0,0,3.51497892375155,3.11087838518853,1.25987779462826,0,0,0,0,0,0,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,1.77858959222228,2.2497492932035,1.97773272513395,2.8419204597844,0.299600110518405,0,0,0.810035629990144,0,0.856952953211411,1.76694832761291,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,1.71452174049252,1.28082701043374,1.04182674111352,0.279182999001381,1.12552522006336,0.763991238884051,2.35702868378934,1.28134512719193,1.1183966749518,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,55.9011458056029,40.0070447088418,42.4007489412408,5.35204995151386,101.377917157311,78.9896243090602,85.3280043783997,0,0,0,0.11418387971906,0,0,0,0.608930956624282,0.461230994512117,0,0.23517741427141,0,0,0.289198713839823,0,0.647067399789637,0,0,0,1.17112318804619,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,1.83000241127451,0.125654352112864,6.25767552692195,5.11430914660661,0.20778804455956,1.94689515681309,0.101839363850316,0.622034853050465,0,0.210441855886474,1.17108398666433,1.60931473103431,0.900310649026746,1.65775299619287,1.83698547708585,1.92170580427275,2.34254311399322,2.32833033665114,1.5089759505299,0.756424320671277,0.703804496655795,0.876782929710299,1.66828349535359,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,1.64168241986767,0,0.946978942340841,0,0.308534225774757,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,5.88811855979556,2.57261530948211,0,0.264450566663544,0,0.232236671860439,0.77320476793256,0.605050573870028,1.33426826306922,0.380451252225118,0.949058123089023,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,5.68474235311454,4.4000543639347,2.37643120085263,2.58159273117352,0.167506257441816,0.714130922658041,0,2.52216230569906,1.55025282754142,2.55127629851979,0.327726629431476,0,0.144649058581512,0,0,0,0,1.28440471990234,0.937693492737625,0,0.252470927204373,0.315508219416257,0,1.29254038639679,0,0.445597348164788,0,0,2.33804686329049,1.18586333383957,0.321321316421807,0.283880170416537,0.178065603667255,0.81443479676788,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,1.98067203434441,0.258717367565509,1.07168517515796,0.354680467284547,0.178368817602071,0.987294123612726,0.304464949114599,0,0,0.661585194164886,0.8244312647074,0.161464426695906,0.663442174209714,0.596861720015682,0.328281799490123,0.874442509889552,2.41052892613663,0,0,0,0,0,0,0,0,0,0,1.26534397432454,2.03319467126849,2.80813886136683,1.67270636811575,1.31017538247707,0.944050424693745,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.651021924219751,0.734015410979976,0,0.288030006257865,0,0.202725215290164,0.513554785824136,0.389762468933385,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,1.50471631210609,1.12950368523413,3.22227665555024,4.58316410751517,1.89038500578056,1.37016503954128,3.7769694869485,6.07520250208625,4.05289082901798,3.62513927187364,3.62432218226274,0.93408612825759,1.99512436700516,1.19513524027894,0.972426868273176,0.838452650511929,0.551530525350042,1.55572709461131,1.44224540067226,0.962757628775446,0.758091635291392,1.52087579934144,1.13175804831646,1.12369808963859,0.89635213366817,0.516919220600519,0.952587382566147,0.811190281613988,1.15745532278223,0.824171801606613,1.03039244094078,1.02860775715625,0.532427418478012,1.1921809497366,0.436039249896986,1.31753132581463,1.01537529470012,1.28049581010941,0.789209134313529,0.950628796921032,1.68342681497322,0.830445126869219,0.492522411877817,1.22769312950907,1.39443157067369,1.15743966588685,1.49886346762768,1.63752125911786,0.644613162144895,2.29545998482612,0.882365676478062,0 | ||
|short_description=p2@Rspo2 | |short_description=p2@Rspo2 | ||
}} | }} |
Latest revision as of 19:14, 26 September 2015
Short description: | p2@Rspo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rspo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:390 |
Association with transcript: | -10bp_to_uc007vph.1_5end |
EntrezGene: | Rspo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.37e-12 | 64 |
neural plate | 1.37e-12 | 64 |
presumptive neural plate | 1.37e-12 | 64 |
gray matter | 9.71e-12 | 34 |
ecto-epithelium | 1.45e-11 | 73 |
pre-chordal neural plate | 3.61e-11 | 49 |
regional part of cerebral cortex | 1.12e-10 | 17 |
occipital lobe | 4.67e-10 | 10 |
visual cortex | 4.67e-10 | 10 |
neocortex | 4.67e-10 | 10 |
brain grey matter | 4.83e-10 | 29 |
regional part of telencephalon | 4.83e-10 | 29 |
telencephalon | 4.83e-10 | 29 |
neural tube | 1.15e-09 | 52 |
neural rod | 1.15e-09 | 52 |
future spinal cord | 1.15e-09 | 52 |
neural keel | 1.15e-09 | 52 |
cerebral cortex | 2.46e-09 | 21 |
cerebral hemisphere | 2.46e-09 | 21 |
pallium | 2.46e-09 | 21 |
regional part of forebrain | 2.00e-08 | 39 |
forebrain | 2.00e-08 | 39 |
future forebrain | 2.00e-08 | 39 |
regional part of nervous system | 4.39e-08 | 54 |
anterior neural tube | 4.77e-08 | 40 |
ectoderm-derived structure | 5.12e-08 | 95 |
ectoderm | 5.12e-08 | 95 |
presumptive ectoderm | 5.12e-08 | 95 |
regional part of brain | 1.70e-07 | 46 |
structure with developmental contribution from neural crest | 1.74e-07 | 92 |
central nervous system | 1.98e-07 | 73 |
brain | 3.44e-07 | 47 |
future brain | 3.44e-07 | 47 |
nervous system | 5.48e-07 | 75 |