FFCP PHASE1:Mm9::chr19:55970060..55970071,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3209 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C834 | |UniProt=Q8C834 | ||
|association_with_transcript=60bp_to_ENSMUST00000111646_5end | |association_with_transcript=60bp_to_ENSMUST00000111646_5end | ||
|cluster_id=chr19:55970060..55970071,+ | |||
|description=CAGE_peak_25_at_Tcf7l2_5end | |description=CAGE_peak_25_at_Tcf7l2_5end | ||
|id=chr19:55970060..55970071,+ | |id=chr19:55970060..55970071,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.07e-07!43;CL:0000221!4.05e-07!44;CL:0000133!4.05e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-23,23;CL:0000337,2.47e-23,23;CL:0002610,4.98e-22,3;CL:0002613,3.34e-21,3;CL:0000120,2.15e-20,3;CL:0000540,4.96e-16,33;CL:0000047,4.96e-16,33;CL:0000031,4.96e-16,33;CL:0000404,4.96e-16,33;CL:0002319,6.59e-15,43;CL:0000221,1.51e-14,44;CL:0000133,1.51e-14,44;CL:0000393,1.94e-13,39;CL:0000211,1.94e-13,39;CL:0002321,9.18e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.19e-10!75;UBERON:0001016!1.19e-10!75;UBERON:0001017!1.85e-10!73;UBERON:0005743!1.85e-10!73;UBERON:0000955!2.53e-08!50;UBERON:0006238!2.53e-08!50;UBERON:0004121!1.22e-07!102;UBERON:0000924!1.22e-07!102;UBERON:0006601!1.22e-07!102;UBERON:0002616!1.34e-07!49;UBERON:0002420!2.10e-07!8;UBERON:0007245!2.10e-07!8;UBERON:0010009!2.10e-07!8;UBERON:0010011!2.10e-07!8;UBERON:0000454!2.10e-07!8;UBERON:0000369!3.80e-07!5;UBERON:0002435!3.80e-07!5;UBERON:0000204!3.80e-07!5;UBERON:0010082!3.80e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.98e-22,3;UBERON:0002275,4.98e-22,3;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0000369,5.54e-13,5;UBERON:0002435,5.54e-13,5;UBERON:0000204,5.54e-13,5;UBERON:0010082,5.54e-13,5;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0000073,1.58e-09,54;UBERON:0002420,2.53e-08,8;UBERON:0007245,2.53e-08,8;UBERON:0010009,2.53e-08,8;UBERON:0010011,2.53e-08,8;UBERON:0000454,2.53e-08,8;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,3.03474691289397,3.70293685490423,1.90149421051854,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,5.50579404996943,5.49055553766307,5.37622866396852,5.01167893374737,5.30628332893976,3.12548022334056,0.279182999001381,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6435098215495,0.457500602818626,0.125654352112864,0,0,4.57133698031032,2.27137768294861,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,0.486213434136588,0.628839487883947,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,3.03474691289397,3.70293685490423,1.90149421051854,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,5.50579404996943,5.49055553766307,5.37622866396852,5.01167893374737,5.30628332893976,3.12548022334056,0.279182999001381,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6435098215495,0.457500602818626,0.125654352112864,0,0,4.57133698031032,2.27137768294861,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.532020700926821,0,0,0,0,0,0,0,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0,0.486213434136588,0.628839487883947,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p25@Tcf7l2 | |short_description=p25@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:58, 25 September 2015
Short description: | p25@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3209 |
Association with transcript: | 60bp_to_ENSMUST00000111646_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.47e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.47e-23 | 23 |
raphe nuclei neuron | 4.98e-22 | 3 |
striatum neuron | 3.34e-21 | 3 |
granule cell | 2.15e-20 | 3 |
neuron | 4.96e-16 | 33 |
neuronal stem cell | 4.96e-16 | 33 |
neuroblast | 4.96e-16 | 33 |
electrically signaling cell | 4.96e-16 | 33 |
neural cell | 6.59e-15 | 43 |
ectodermal cell | 1.51e-14 | 44 |
neurectodermal cell | 1.51e-14 | 44 |
electrically responsive cell | 1.94e-13 | 39 |
electrically active cell | 1.94e-13 | 39 |
embryonic cell | 9.18e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.98e-22 | 3 |
reticular formation | 4.98e-22 | 3 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
corpus striatum | 5.54e-13 | 5 |
striatum | 5.54e-13 | 5 |
ventral part of telencephalon | 5.54e-13 | 5 |
future corpus striatum | 5.54e-13 | 5 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
regional part of nervous system | 1.58e-09 | 54 |
basal ganglion | 2.53e-08 | 8 |
nuclear complex of neuraxis | 2.53e-08 | 8 |
aggregate regional part of brain | 2.53e-08 | 8 |
collection of basal ganglia | 2.53e-08 | 8 |
cerebral subcortex | 2.53e-08 | 8 |
corpora quadrigemina | 3.50e-08 | 1 |
midbrain tectum | 3.50e-08 | 1 |
neural tube mantle layer | 3.50e-08 | 1 |
tectal plate | 3.50e-08 | 1 |
neural tube alar plate | 3.50e-08 | 1 |