FFCP PHASE1:Mm9::chr1:129101566..129101628,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107895 | |EntrezGene=107895 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R4G6,Q059T5 | |UniProt=Q8R4G6,Q059T5 | ||
|association_with_transcript=3bp_to_ENSMUST00000038361,NM_145128,uc007ckp.1,uc007ckq.1,uc007ckr.1_5end | |association_with_transcript=3bp_to_ENSMUST00000038361,NM_145128,uc007ckp.1,uc007ckq.1,uc007ckr.1_5end | ||
|cluster_id=chr1:129101566..129101628,+ | |||
|description=CAGE_peak_1_at_Mgat5_5end | |description=CAGE_peak_1_at_Mgat5_5end | ||
|id=chr1:129101566..129101628,+ | |id=chr1:129101566..129101628,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.85e-18!99;UBERON:0007811!4.39e-10!86;UBERON:0000955!4.69e-09!50;UBERON:0006238!4.69e-09!50;UBERON:0002616!8.41e-09!49;UBERON:0000153!8.75e-09!94;UBERON:0000344!1.27e-08!15;UBERON:0001049!2.28e-08!52;UBERON:0005068!2.28e-08!52;UBERON:0006241!2.28e-08!52;UBERON:0007135!2.28e-08!52;UBERON:0001242!3.87e-08!13;UBERON:0000060!3.87e-08!13;UBERON:0001262!3.87e-08!13;UBERON:0004786!3.87e-08!13;UBERON:0003080!1.05e-07!40;UBERON:0002780!2.12e-07!39;UBERON:0001890!2.12e-07!39;UBERON:0006240!2.12e-07!39;UBERON:0002020!6.13e-07!34;UBERON:0003056!8.18e-07!49;UBERON:0002791!8.68e-07!29;UBERON:0003528!8.68e-07!29;UBERON:0001893!8.68e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.70e-11,31;UBERON:0000073,4.62e-09,54;UBERON:0000344,1.27e-08,15;UBERON:0001049,2.28e-08,52;UBERON:0005068,2.28e-08,52;UBERON:0006241,2.28e-08,52;UBERON:0007135,2.28e-08,52;UBERON:0000955,3.58e-08,47;UBERON:0006238,3.58e-08,47;UBERON:0001242,3.87e-08,13;UBERON:0001262,3.87e-08,13;UBERON:0004786,3.87e-08,13;UBERON:0002616,6.33e-08,46;UBERON:0003080,1.05e-07,40;UBERON:0002780,2.12e-07,39;UBERON:0001890,2.12e-07,39;UBERON:0006240,2.12e-07,39;UBERON:0011216,3.66e-07,194;UBERON:0002020,6.13e-07,34;UBERON:0005409,7.87e-07,47;UBERON:0003056,8.18e-07,49;UBERON:0003528,8.68e-07,29;UBERON:0002791,8.68e-07,29;UBERON:0001893,8.68e-07,29 | |||
|phase1_expression=10.4096750618116,83.0561470181679,84.1748592870642,96.7885476181856,119.714079457177,39.619508171206,38.7796983388573,38.4787503855897,41.2510955904384,46.1107116854327,23.9705155515707,28.0000278073631,19.6880839420887,18.1834437031515,13.6575002344422,10.9336644390506,10.4934281719222,21.1359650790019,24.680598049033,24.6145998042858,16.5834415794586,27.0071387266408,13.0599894569468,33.438416363822,29.1349786955306,38.4735415957064,31.4456257196125,34.4753972297422,41.2350820220331,44.6093329675077,29.9336189384661,0,0,0,49.393626977468,35.7404487520759,40.8338712524738,32.2269355667419,24.2213956802378,24.6056159667685,26.4704169613956,34.1522742479223,30.1016418879315,15.2335149750449,15.6120474078052,15.0508336772579,3.9119567217402,23.3286917327078,17.5748946187577,19.2485600083541,12.738764367908,17.2503077237966,20.6372605451016,33.3666585325218,25.5431287348273,5.40244815675489,4.58453503902011,7.73508138416164,30.3474691289397,25.9205579843296,20.9164363157039,13.5537812827653,5.33576877666684,19.3478439215501,22.7439263390404,26.9982443679518,33.2556122675429,62.6275837674134,18.5604406032175,18.9008313664367,20.6118462124354,19.4242669394586,17.8903518170807,25.7230678351403,27.6993411242703,19.3035945188104,29.731287869835,34.6032686210859,33.1790111833486,32.0483679184371,24.7016637726506,31.2548022334056,27.9182999001381,21.9477417912355,26.1285003698345,24.4541725943144,22.4947255662583,25.9095229697168,3.63485727999283,3.85414956544606,24.3486170509409,5.16254326188832,3.39985666853875,4.85732872474035,6.49776417447669,6.2723764193627,11.0951091904084,2.89731548382698,2.85764605063156,2.82671659608272,7.60554466794075,2.56652954828636,0,0,32.2571651106709,32.1767029153375,34.88118670602,15.5290076417922,22.7865337609511,17.0708459924548,11.6235168933311,7.00270600117925,9.91646638201052,9.3448037142626,11.5236932992991,10.053327306374,18.2924276123437,12.4355446951124,23.8844849026466,12.6178142958979,22.0841518460394,16.4857586065976,31.6865994070808,20.7874365878198,37.0720671059815,45.2158987719207,68.1748058438686,36.5940665905979,63.6621837636054,33.2535219478706,22.8750301409313,40.4607013803423,36.1554585999935,44.4944895754775,29.5059023274575,30.1768749306029,9.980257657331,19.6563013563947,6.06534620240819,9.46988351489133,13.6626465110839,12.644615743841,14.0448461248172,20.0437407721501,27.2826361596825,28.953700784376,22.3010104452155,27.1638539275966,11.8562396113063,14.3720620927543,14.9558455539357,12.2749610159442,21.1315909411454,10.0993128291428,19.5493029587546,19.3063238813938,23.87524836865,32.9405321106835,49.4444488948331,10.9776659443816,9.85009451920604,10.6236616261999,13.7311946639422,16.9217239302767,16.8151153047242,18.1376476905318,18.7791380979733,14.1286064264275,17.2787842409154,14.7750717671186,14.1059728609789,14.6199987425332,14.4903076092093,10.6023070820694,25.8656636733877,20.272208638719,83.2655333119171,40.7253872661858,11.5175655289026,13.9342003116263,15.8506977426175,20.3700359869576,19.3468898145037,18.6421113590308,54.0963130160743,24.7048432086016,42.9783207048461,38.9954685200656,46.2064886472315,53.0303451105991,46.2535426731846,59.1449581565471,13.2767530667157,17.9370164797274,20.2873924211545,20.1614814566861,16.2920089220806,23.565635483147,21.1842399366262,23.4700135287567,21.351826986427,26.7771845710307,9.48648406678877,4.67166296005063,4.71741588271687,4.49724224769707,6.28866376304359,4.82354319504834,8.14802725700543,8.63088412352432,7.62035565842666,7.96228098245436,15.814502718009,10.0478055870496,12.1694692514679,10.8608917517258,9.68746033018326,13.0259750768109,18.4753190166605,10.9905018826881,12.2223732331519,9.50572480341054,11.7345124144251,13.2329943379034,12.3782693260727,17.9522956029175,18.128041572212,15.5025282754142,23.2803962239931,19.1720078217413,17.6138681503213,19.0936757327595,18.0949540727127,22.8440387203858,10.3270497333998,7.45029215022778,28.578005017827,31.0610969469338,6.72133276044369,8.58401152494868,12.9358369960665,10.1514073517126,9.47862950024315,11.2315335037699,9.58034298554295,8.49229592366497,15.382806663646,17.5353514746787,12.2539211163422,29.8828824272281,21.149072696032,14.2452482933804,21.1753047159649,27.3850404134409,3.98235415019888,11.1679092631291,10.2790009368015,8.29862350925952,5.61073596473468,8.9156192903739,16.2809824695979,8.72480950746013,12.1209108650805,9.16506598013866,5.27093042874994,8.25084345985495,37.1079170271629,17.8260483090997,15.1349660025823,21.005029433096,19.8621061679346,21.5826269298505,21.2268236576736,24.0527309800533,26.2832313031356,28.3854974957519,5.95426674748397,23.4138479176902,19.8601244835964,23.8236053466216,26.3812880246932,41.3635067357554,58.8791289992298,25.9595422814714,17.9414424837745,13.8279201535359,12.7784223885101,11.3021074202815,15.3097535047548,21.7339264546196,67.4814367075606,57.6599983573471,64.4011877928615,5.72802370809068,9.01557581706236,15.0456405673868,17.4968652131318,19.4452115293456,17.6873676634404,16.7231789517178,19.7541759183553,14.6583327511057,53.4013689962187,13.6694648879124,5.6369293868419,14.6526215123099,13.567596217482,13.2226808073952,13.5617814651618,15.0370951686793,13.4960824442617,23.3065848870671,25.2711020065963,15.7029678536904,16.1296803504405,48.9817236973676,17.231643299664,16.9473079321965,22.3463815521807,25.0637373934474,36.9547319893153,50.6022842479069,44.8976162610715,57.6518429203923,62.9468222970299,60.2940587118306,64.2247434074968,73.1209996466504,89.6445839732634,9.06921534460846,9.32341004171072,19.1090514578183,12.75923084367,34.7741269257943,15.2022805115457,16.4836461840539,18.0069438426415,2.00628841614145,38.9678771405776,41.8895965221531,42.3942679945154,36.2610214745181,43.8452812653211,40.7912704590438,32.4010800111267,31.5224842256954,35.345107900768,39.8675440048901,7.36890167847654,16.3600198094423,17.5855613926758,11.6691224192781,9.01336599300324,7.72142735490059,12.6680634846921,12.7741735488114,15.0832028508153,14.1510438587727,11.4065684950608,17.1649970661329,12.9225280308438,13.8934580718566,14.5886091147258,14.2888107384922,15.9920369803901,14.8540099757053,16.8955219329356,14.5726930933053,12.0004238334895,13.3106854619503,18.8364590058384,16.5694914960855,14.6810633447916,14.4690979494767,14.8171658026946,12.6273461490165,14.1236278399696,15.1508413347589,13.1684870117833,15.2681947682123,13.0953933814301,13.0146946596211,13.3105561576988,23.9818154820428,14.7376913320607,16.1153290536224,10.9034349279241,13.67666798541,13.216466630364 | |phase1_expression=10.4096750618116,83.0561470181679,84.1748592870642,96.7885476181856,119.714079457177,39.619508171206,38.7796983388573,38.4787503855897,41.2510955904384,46.1107116854327,23.9705155515707,28.0000278073631,19.6880839420887,18.1834437031515,13.6575002344422,10.9336644390506,10.4934281719222,21.1359650790019,24.680598049033,24.6145998042858,16.5834415794586,27.0071387266408,13.0599894569468,33.438416363822,29.1349786955306,38.4735415957064,31.4456257196125,34.4753972297422,41.2350820220331,44.6093329675077,29.9336189384661,0,0,0,49.393626977468,35.7404487520759,40.8338712524738,32.2269355667419,24.2213956802378,24.6056159667685,26.4704169613956,34.1522742479223,30.1016418879315,15.2335149750449,15.6120474078052,15.0508336772579,3.9119567217402,23.3286917327078,17.5748946187577,19.2485600083541,12.738764367908,17.2503077237966,20.6372605451016,33.3666585325218,25.5431287348273,5.40244815675489,4.58453503902011,7.73508138416164,30.3474691289397,25.9205579843296,20.9164363157039,13.5537812827653,5.33576877666684,19.3478439215501,22.7439263390404,26.9982443679518,33.2556122675429,62.6275837674134,18.5604406032175,18.9008313664367,20.6118462124354,19.4242669394586,17.8903518170807,25.7230678351403,27.6993411242703,19.3035945188104,29.731287869835,34.6032686210859,33.1790111833486,32.0483679184371,24.7016637726506,31.2548022334056,27.9182999001381,21.9477417912355,26.1285003698345,24.4541725943144,22.4947255662583,25.9095229697168,3.63485727999283,3.85414956544606,24.3486170509409,5.16254326188832,3.39985666853875,4.85732872474035,6.49776417447669,6.2723764193627,11.0951091904084,2.89731548382698,2.85764605063156,2.82671659608272,7.60554466794075,2.56652954828636,0,0,32.2571651106709,32.1767029153375,34.88118670602,15.5290076417922,22.7865337609511,17.0708459924548,11.6235168933311,7.00270600117925,9.91646638201052,9.3448037142626,11.5236932992991,10.053327306374,18.2924276123437,12.4355446951124,23.8844849026466,12.6178142958979,22.0841518460394,16.4857586065976,31.6865994070808,20.7874365878198,37.0720671059815,45.2158987719207,68.1748058438686,36.5940665905979,63.6621837636054,33.2535219478706,22.8750301409313,40.4607013803423,36.1554585999935,44.4944895754775,29.5059023274575,30.1768749306029,9.980257657331,19.6563013563947,6.06534620240819,9.46988351489133,13.6626465110839,12.644615743841,14.0448461248172,20.0437407721501,27.2826361596825,28.953700784376,22.3010104452155,27.1638539275966,11.8562396113063,14.3720620927543,14.9558455539357,12.2749610159442,21.1315909411454,10.0993128291428,19.5493029587546,19.3063238813938,23.87524836865,32.9405321106835,49.4444488948331,10.9776659443816,9.85009451920604,10.6236616261999,13.7311946639422,16.9217239302767,16.8151153047242,18.1376476905318,18.7791380979733,14.1286064264275,17.2787842409154,14.7750717671186,14.1059728609789,14.6199987425332,14.4903076092093,10.6023070820694,25.8656636733877,20.272208638719,83.2655333119171,40.7253872661858,11.5175655289026,13.9342003116263,15.8506977426175,20.3700359869576,19.3468898145037,18.6421113590308,54.0963130160743,24.7048432086016,42.9783207048461,38.9954685200656,46.2064886472315,53.0303451105991,46.2535426731846,59.1449581565471,13.2767530667157,17.9370164797274,20.2873924211545,20.1614814566861,16.2920089220806,23.565635483147,21.1842399366262,23.4700135287567,21.351826986427,26.7771845710307,9.48648406678877,4.67166296005063,4.71741588271687,4.49724224769707,6.28866376304359,4.82354319504834,8.14802725700543,8.63088412352432,7.62035565842666,7.96228098245436,15.814502718009,10.0478055870496,12.1694692514679,10.8608917517258,9.68746033018326,13.0259750768109,18.4753190166605,10.9905018826881,12.2223732331519,9.50572480341054,11.7345124144251,13.2329943379034,12.3782693260727,17.9522956029175,18.128041572212,15.5025282754142,23.2803962239931,19.1720078217413,17.6138681503213,19.0936757327595,18.0949540727127,22.8440387203858,10.3270497333998,7.45029215022778,28.578005017827,31.0610969469338,6.72133276044369,8.58401152494868,12.9358369960665,10.1514073517126,9.47862950024315,11.2315335037699,9.58034298554295,8.49229592366497,15.382806663646,17.5353514746787,12.2539211163422,29.8828824272281,21.149072696032,14.2452482933804,21.1753047159649,27.3850404134409,3.98235415019888,11.1679092631291,10.2790009368015,8.29862350925952,5.61073596473468,8.9156192903739,16.2809824695979,8.72480950746013,12.1209108650805,9.16506598013866,5.27093042874994,8.25084345985495,37.1079170271629,17.8260483090997,15.1349660025823,21.005029433096,19.8621061679346,21.5826269298505,21.2268236576736,24.0527309800533,26.2832313031356,28.3854974957519,5.95426674748397,23.4138479176902,19.8601244835964,23.8236053466216,26.3812880246932,41.3635067357554,58.8791289992298,25.9595422814714,17.9414424837745,13.8279201535359,12.7784223885101,11.3021074202815,15.3097535047548,21.7339264546196,67.4814367075606,57.6599983573471,64.4011877928615,5.72802370809068,9.01557581706236,15.0456405673868,17.4968652131318,19.4452115293456,17.6873676634404,16.7231789517178,19.7541759183553,14.6583327511057,53.4013689962187,13.6694648879124,5.6369293868419,14.6526215123099,13.567596217482,13.2226808073952,13.5617814651618,15.0370951686793,13.4960824442617,23.3065848870671,25.2711020065963,15.7029678536904,16.1296803504405,48.9817236973676,17.231643299664,16.9473079321965,22.3463815521807,25.0637373934474,36.9547319893153,50.6022842479069,44.8976162610715,57.6518429203923,62.9468222970299,60.2940587118306,64.2247434074968,73.1209996466504,89.6445839732634,9.06921534460846,9.32341004171072,19.1090514578183,12.75923084367,34.7741269257943,15.2022805115457,16.4836461840539,18.0069438426415,2.00628841614145,38.9678771405776,41.8895965221531,42.3942679945154,36.2610214745181,43.8452812653211,40.7912704590438,32.4010800111267,31.5224842256954,35.345107900768,39.8675440048901,7.36890167847654,16.3600198094423,17.5855613926758,11.6691224192781,9.01336599300324,7.72142735490059,12.6680634846921,12.7741735488114,15.0832028508153,14.1510438587727,11.4065684950608,17.1649970661329,12.9225280308438,13.8934580718566,14.5886091147258,14.2888107384922,15.9920369803901,14.8540099757053,16.8955219329356,14.5726930933053,12.0004238334895,13.3106854619503,18.8364590058384,16.5694914960855,14.6810633447916,14.4690979494767,14.8171658026946,12.6273461490165,14.1236278399696,15.1508413347589,13.1684870117833,15.2681947682123,13.0953933814301,13.0146946596211,13.3105561576988,23.9818154820428,14.7376913320607,16.1153290536224,10.9034349279241,13.67666798541,13.216466630364 | ||
|short_description=p1@Mgat5 | |short_description=p1@Mgat5 | ||
}} | }} |
Latest revision as of 07:13, 26 September 2015
Short description: | p1@Mgat5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mgat5_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENSMUST00000038361, NM_145128, uc007ckp.1, uc007ckq.1, uc007ckr.1_5end |
EntrezGene: | Mgat5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.70e-11 | 31 |
regional part of nervous system | 4.62e-09 | 54 |
mucosa | 1.27e-08 | 15 |
neural tube | 2.28e-08 | 52 |
neural rod | 2.28e-08 | 52 |
future spinal cord | 2.28e-08 | 52 |
neural keel | 2.28e-08 | 52 |
brain | 3.58e-08 | 47 |
future brain | 3.58e-08 | 47 |
intestinal mucosa | 3.87e-08 | 13 |
wall of intestine | 3.87e-08 | 13 |
gastrointestinal system mucosa | 3.87e-08 | 13 |
regional part of brain | 6.33e-08 | 46 |
anterior neural tube | 1.05e-07 | 40 |
regional part of forebrain | 2.12e-07 | 39 |
forebrain | 2.12e-07 | 39 |
future forebrain | 2.12e-07 | 39 |
organ system subdivision | 3.66e-07 | 194 |
gray matter | 6.13e-07 | 34 |
gastrointestinal system | 7.87e-07 | 47 |
pre-chordal neural plate | 8.18e-07 | 49 |
brain grey matter | 8.68e-07 | 29 |
regional part of telencephalon | 8.68e-07 | 29 |
telencephalon | 8.68e-07 | 29 |