FFCP PHASE1:Hg19::chr11:9927546..9927569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:9927546..9927569,- | |||
|description=CAGE_peak_at_chr11:9927546..9927569,- | |description=CAGE_peak_at_chr11:9927546..9927569,- | ||
|id=chr11:9927546..9927569,- | |id=chr11:9927546..9927569,- | ||
|ontology_enrichment_celltype=CL:0000055!6.71e-35!180;CL:0000057!2.04e-33!75;CL:0002620!8.99e-22!23;CL:0000144!1.90e-16!625;CL:0000548!3.22e-16!679;CL:0000004!3.22e-16!679;CL:0000255!3.22e-16!679;CL:0000012!6.66e-16!682;CL:0002371!1.49e-14!591;CL:0000003!6.20e-12!722;CL:0000220!2.03e-09!246;CL:0002321!3.61e-09!248;CL:0000723!4.80e-08!436;CL:0000680!6.52e-08!57;CL:0000056!6.52e-08!57;CL:0000355!6.52e-08!57;CL:0000048!1.76e-07!430;CL:0000183!2.15e-07!59;CL:0000034!2.32e-07!444;CL:0002556!2.83e-07!6;CL:0000187!3.36e-07!54;CL:0000393!5.36e-07!60;CL:0000211!5.36e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.71e-35!180;CL:0000057!2.04e-33!75;CL:0002620!8.99e-22!23;CL:0000144!1.90e-16!625;CL:0000548!3.22e-16!679;CL:0000004!3.22e-16!679;CL:0000255!3.22e-16!679;CL:0000012!6.66e-16!682;CL:0002371!1.49e-14!591;CL:0000003!6.20e-12!722;CL:0000220!2.03e-09!246;CL:0002321!3.61e-09!248;CL:0000723!4.80e-08!436;CL:0000680!6.52e-08!57;CL:0000056!6.52e-08!57;CL:0000355!6.52e-08!57;CL:0000048!1.76e-07!430;CL:0000183!2.15e-07!59;CL:0000034!2.32e-07!444;CL:0002556!2.83e-07!6;CL:0000187!3.36e-07!54;CL:0000393!5.36e-07!60;CL:0000211!5.36e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.96e-27;23!CL:0000057;5.57e-12;73!CL:0002559;3.11e-08;5!CL:0000346;7.43e-07;3!CL:1000428;7.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.63e-27,23;CL:0000057,2.23e-22,76;CL:0002559,2.02e-08,5;CL:0000346,7.48e-07,3;CL:1000428,7.48e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.26e-07!5;DOID:450!3.26e-07!5;DOID:66!3.26e-07!5;DOID:423!3.26e-07!5;DOID:0080000!3.26e-07!5;DOID:11722!3.26e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;6.50e-14;5!DOID:450;6.50e-14;5!DOID:66;6.50e-14;5!DOID:423;6.50e-14;5!DOID:0080000;6.50e-14;5!DOID:11722;6.50e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.70e-14,5;DOID:450,8.70e-14,5;DOID:66,8.70e-14,5;DOID:423,8.70e-14,5;DOID:0080000,8.70e-14,5;DOID:11722,8.70e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.11e-25!95;UBERON:0002097!3.54e-23!40;UBERON:0002199!1.26e-20!45;UBERON:0002416!1.26e-20!45;UBERON:0000914!4.17e-15!83;UBERON:0002329!4.17e-15!83;UBERON:0003077!4.17e-15!83;UBERON:0003059!4.17e-15!83;UBERON:0007282!4.17e-15!83;UBERON:0009618!4.17e-15!83;UBERON:0007285!4.17e-15!83;UBERON:0000475!5.38e-12!365;UBERON:0000486!3.04e-11!82;UBERON:0004290!3.08e-11!70;UBERON:0005256!1.39e-09!143;UBERON:0002067!3.15e-08!9;UBERON:0004016!3.15e-08!9;UBERON:0010083!3.15e-08!9;UBERON:0002100!1.05e-07!216;UBERON:0001758!2.83e-07!6;UBERON:0003672!2.83e-07!6;UBERON:0001134!7.01e-07!61;UBERON:0002036!7.01e-07!61;UBERON:0003082!7.01e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.66e-20;41!UBERON:0002199;2.23e-15;46!UBERON:0002416;2.23e-15;46!UBERON:0003102;1.39e-13;50!UBERON:0002073;3.11e-08;5!UBERON:0002067;1.43e-07;9!UBERON:0000412;7.43e-07;3!UBERON:0001992;7.43e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.67e-28,41;UBERON:0002199,1.91e-24,46;UBERON:0002416,1.91e-24,46;UBERON:0003102,1.38e-17,99;UBERON:0002073,2.02e-08,5;UBERON:0005086,2.02e-08,5;UBERON:0002067,1.09e-07,9;UBERON:0004016,1.09e-07,9;UBERON:0010083,1.09e-07,9;UBERON:0000412,7.48e-07,3;UBERON:0001992,7.48e-07,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0.492484232307152,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0,0.25326102332916,1.85372853138506,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,2.8757911252537,0,0.70296429550139,0,1.71141546463335,0.448346041655403,0.469737994575059,0.809364721840658,1.26405726032024,2.04154171254893,0.368502951935304,0,0,0.741800787835671,0.910161361938026,1.43723628363248,1.0100166837244,0.500474079487857,2.21651292387346,0.438977620880838,1.22595118319608,0.751190294532984,0.113432183160021,1.07633781413317,3.20336083227851,3.60284231971255,0.900273288253207,3.09157587715317,1.54584324027377,2.23340227597908,0.168776332241266,0.68205903612839,1.00973509697646,2.39329736469978,1.45481451136931,1.06502877754984,0.705264687593482,1.3564847384839,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0,0,0,0,10.9514672630871,0.643240938192885,5.52539685409922,1.85747171212792,0,0,0,0,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,1.1240175325762,0.301586917234893,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.358234090811393,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,2.80327710863402,1.30788020649984,0.7333828582095,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0,0,0.799266537048298,0.142977993658148,0,1.64648067356154,0.325736184293735,0,0,0,0,0,0,0,0,1.19812427745791,0,0,1.88215698667853,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,0,1.03473071292505,0,0.184369168541703,1.04260337361699,0.979005787313703,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.0821271560138091,0,0,0.846016147141356,1.00253235151642,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0.154048617114644,0,0.137836572484531,0.644521469209642,0.435050081742686,0.255679882248303,0.0890320356467374,0,0.384380134730212,1.40373983744043,0,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,1.48863347743867,0.316379424718726,0,1.02359116524534,0,0.636406495851874,0,1.07923474549989,0.274537029736055,0.706874414074119,0,0,0,0.975267478179181,0,0,0.409499734223957,0.141405431953713,1.13008116620243,0.551365343546124,0,0,1.73632660280006,0,0.202910376962704,0.30982349809975,1.12678241012897,0.143411352204052,0,0,0,0,0,0.379473173765715,1.04980416073495,0.48111056362756,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,1.13176968554523,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0.397429223405979,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0.285465333544967,0,0,0,0.298509605773748,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0.428883182749851,0,0,0.463044948647668,0.489473409012935,0.358177682162975,0.308801447160972,0,1.06013487567529,0.964570191354574,0,0,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.577628330751691,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.828324005113957,0.511280428554946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,1.29787968637137,0,0,0,0,0,0.0918948995348449,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,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|short_description=p@chr11:9927546..9927569,- | |short_description=p@chr11:9927546..9927569,- | ||
}} | }} |
Latest revision as of 03:51, 24 July 2015
Short description: | p@chr11:9927546..9927569, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9927546..9927569, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.63e-27 | 23 |
fibroblast | 2.23e-22 | 76 |
hair follicle cell | 2.02e-08 | 5 |
hair follicle dermal papilla cell | 7.48e-07 | 3 |
stem cell of epidermis | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.67e-28 | 41 |
integument | 1.91e-24 | 46 |
integumental system | 1.91e-24 | 46 |
surface structure | 1.38e-17 | 99 |
hair follicle | 2.02e-08 | 5 |
hair follicle placode | 2.02e-08 | 5 |
dermis | 1.09e-07 | 9 |
dermatome | 1.09e-07 | 9 |
future dermis | 1.09e-07 | 9 |
dermal papilla | 7.48e-07 | 3 |
papillary layer of dermis | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.70e-14 | 5 |
myotonic disease | 8.70e-14 | 5 |
muscle tissue disease | 8.70e-14 | 5 |
myopathy | 8.70e-14 | 5 |
muscular disease | 8.70e-14 | 5 |
myotonic dystrophy | 8.70e-14 | 5 |