FFCP PHASE1:Hg19::chr12:120907459..120907559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8683 | |EntrezGene=8683 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10791 | |HGNC=10791 | ||
|TSSclassifier=strong | |||
|UniProt=Q13242 | |UniProt=Q13242 | ||
|association_with_transcript=0bp_to_ENST00000546942,NM_003769,uc001tyi.2,uc009zwy.2_5end | |association_with_transcript=0bp_to_ENST00000546942,NM_003769,uc001tyi.2,uc009zwy.2_5end | ||
|cluster_id=chr12:120907459..120907559,- | |||
|description=CAGE_peak_1_at_SRSF9_5end | |description=CAGE_peak_1_at_SRSF9_5end | ||
|id=chr12:120907459..120907559,- | |id=chr12:120907459..120907559,- | ||
|ontology_enrichment_celltype=CL:0000012!2.26e-35!682;CL:0000548!1.06e-34!679;CL:0000004!1.06e-34!679;CL:0000255!1.06e-34!679;CL:0000066!3.00e-23!254;CL:0000144!3.17e-22!625;CL:0002321!9.69e-20!248;CL:0000220!2.90e-19!246;CL:0000003!7.24e-19!722;CL:0002371!1.22e-13!591;CL:0000063!1.44e-13!578;CL:0000222!2.21e-13!119;CL:0000076!1.65e-09!62;CL:0000213!6.33e-08!57;CL:0000215!6.33e-08!57;CL:0000183!1.68e-07!59;CL:1000449!3.56e-07!16 | |ontology_enrichment_celltype=CL:0000012!2.26e-35!682;CL:0000548!1.06e-34!679;CL:0000004!1.06e-34!679;CL:0000255!1.06e-34!679;CL:0000066!3.00e-23!254;CL:0000144!3.17e-22!625;CL:0002321!9.69e-20!248;CL:0000220!2.90e-19!246;CL:0000003!7.24e-19!722;CL:0002371!1.22e-13!591;CL:0000063!1.44e-13!578;CL:0000222!2.21e-13!119;CL:0000076!1.65e-09!62;CL:0000213!6.33e-08!57;CL:0000215!6.33e-08!57;CL:0000183!1.68e-07!59;CL:1000449!3.56e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;9.22e-08;15!CL:1000497;3.68e-07;17!CL:0002518;3.68e-07;17!CL:0002681;6.02e-07;12!CL:0002584;6.02e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.04e-23,253;CL:0002321,5.31e-20,250;CL:0000222,1.38e-13,121;CL:0000076,1.41e-09,63;CL:0000213,2.52e-08,58;CL:0000215,2.52e-08,58;CL:1000449,9.33e-08,15;CL:1000497,3.87e-07,17;CL:0002518,3.87e-07,17;CL:0002681,6.15e-07,12;CL:0002584,6.15e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.06e-19!239;DOID:162!2.16e-19!235;DOID:0050687!9.22e-13!143;DOID:0050686!3.39e-11!137;DOID:305!7.70e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.06e-19,239;DOID:162,2.16e-19,235;DOID:0050687,9.22e-13,143;DOID:0050686,3.39e-11,137;DOID:305,7.70e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002100!2.75e-11!216;UBERON:0003104!5.06e-10!238;UBERON:0009142!5.06e-10!238;UBERON:0005256!8.15e-09!143;UBERON:0000490!1.37e-08!138;UBERON:0009569!2.38e-08!113;UBERON:0003914!7.02e-08!118;UBERON:0005177!7.57e-08!107;UBERON:0004211!3.56e-07!16;UBERON:0001285!3.56e-07!16;UBERON:0007684!3.56e-07!16;UBERON:0003220!3.56e-07!16;UBERON:0004208!3.56e-07!16;UBERON:0006554!5.42e-07!44;UBERON:0000353!6.79e-07!17;UBERON:0000466!9.62e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.22e-08;15!UBERON:0004819;9.22e-08;15!UBERON:0001285;9.22e-08;15!UBERON:0007684;9.22e-08;15!UBERON:0006554;1.17e-07;30!UBERON:0001008;1.17e-07;30!UBERON:0002113;2.57e-07;24!UBERON:0011143;2.57e-07;24!UBERON:0001851;3.77e-07;15!UBERON:0000353;5.16e-07;15!UBERON:0001225;6.02e-07;12!UBERON:0008987;6.02e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.28e-12,199;UBERON:0000490,2.40e-09,148;UBERON:0005177,6.57e-09,101;UBERON:0003104,9.22e-09,160;UBERON:0009142,9.22e-09,160;UBERON:0009569,2.85e-08,112;UBERON:0003914,5.20e-08,117;UBERON:0006554,8.00e-08,47;UBERON:0004211,9.33e-08,15;UBERON:0009773,9.33e-08,15;UBERON:0001231,9.33e-08,15;UBERON:0001285,9.33e-08,15;UBERON:0007684,9.33e-08,15;UBERON:0004208,9.33e-08,15;UBERON:0001008,1.60e-07,48;UBERON:0005256,2.97e-07,122;UBERON:0001851,3.92e-07,15;UBERON:0000353,5.40e-07,15;UBERON:0006555,5.59e-07,16;UBERON:0004819,5.59e-07,16;UBERON:0001225,6.15e-07,12;UBERON:0008987,6.15e-07,12;UBERON:0007503,8.59e-07,78 | |||
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| ||
|short_description=p1@SRSF9 | |short_description=p1@SRSF9 | ||
}} | }} |
Latest revision as of 20:24, 16 September 2015
Short description: | p1@SRSF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546942, NM_003769, uc001tyi.2, uc009zwy.2_5end |
EntrezGene: | SRSF9 |
HGNC: | 10791 |
UniProt: | Q13242 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.04e-23 | 253 |
embryonic cell | 5.31e-20 | 250 |
mesodermal cell | 1.38e-13 | 121 |
squamous epithelial cell | 1.41e-09 | 63 |
lining cell | 2.52e-08 | 58 |
barrier cell | 2.52e-08 | 58 |
epithelial cell of nephron | 9.33e-08 | 15 |
kidney cell | 3.87e-07 | 17 |
kidney epithelial cell | 3.87e-07 | 17 |
kidney cortical cell | 6.15e-07 | 12 |
renal cortical epithelial cell | 6.15e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.28e-12 | 199 |
unilaminar epithelium | 2.40e-09 | 148 |
trunk region element | 6.57e-09 | 101 |
mesenchyme | 9.22e-09 | 160 |
entire embryonic mesenchyme | 9.22e-09 | 160 |
subdivision of trunk | 2.85e-08 | 112 |
epithelial tube | 5.20e-08 | 117 |
urinary system structure | 8.00e-08 | 47 |
nephron epithelium | 9.33e-08 | 15 |
renal tubule | 9.33e-08 | 15 |
nephron tubule | 9.33e-08 | 15 |
nephron | 9.33e-08 | 15 |
uriniferous tubule | 9.33e-08 | 15 |
nephrogenic mesenchyme | 9.33e-08 | 15 |
renal system | 1.60e-07 | 48 |
trunk mesenchyme | 2.97e-07 | 122 |
cortex | 3.92e-07 | 15 |
parenchyma | 5.40e-07 | 15 |
excretory tube | 5.59e-07 | 16 |
kidney epithelium | 5.59e-07 | 16 |
cortex of kidney | 6.15e-07 | 12 |
renal parenchyma | 6.15e-07 | 12 |
epithelial vesicle | 8.59e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.06e-19 | 239 |
cancer | 2.16e-19 | 235 |
cell type cancer | 9.22e-13 | 143 |
organ system cancer | 3.39e-11 | 137 |
carcinoma | 7.70e-09 | 106 |