FFCP PHASE1:Hg19::chr12:131576474..131576497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283383 | |EntrezGene=283383 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19893 | |HGNC=19893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000536988_5end | |association_with_transcript=17bp_to_ENST00000536988_5end | ||
|cluster_id=chr12:131576474..131576497,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_7_at_GPR133_5end | |description=CAGE_peak_7_at_GPR133_5end | ||
|id=chr12:131576474..131576497,+ | |id=chr12:131576474..131576497,+ | ||
|ontology_enrichment_celltype=CL:0000453!4.90e-31!5;CL:0000990!2.12e-26!8;CL:0000451!1.34e-21!10;CL:0000080!1.84e-15!6;CL:0000988!7.15e-11!182;CL:0000838!9.36e-11!52;CL:0000946!1.33e-10!1;CL:0000786!1.33e-10!1;CL:0000980!1.33e-10!1;CL:0000542!1.56e-10!53;CL:0000051!1.56e-10!53;CL:0000945!8.25e-10!24;CL:0000826!8.25e-10!24;CL:0000738!2.49e-09!140;CL:0002032!1.32e-07!165;CL:0000837!1.32e-07!165;CL:0000037!3.27e-07!172;CL:0000566!3.27e-07!172;CL:0000840!3.80e-07!5;CL:0001029!3.80e-07!5 | |ontology_enrichment_celltype=CL:0000453!4.90e-31!5;CL:0000990!2.12e-26!8;CL:0000451!1.34e-21!10;CL:0000080!1.84e-15!6;CL:0000988!7.15e-11!182;CL:0000838!9.36e-11!52;CL:0000946!1.33e-10!1;CL:0000786!1.33e-10!1;CL:0000980!1.33e-10!1;CL:0000542!1.56e-10!53;CL:0000051!1.56e-10!53;CL:0000945!8.25e-10!24;CL:0000826!8.25e-10!24;CL:0000738!2.49e-09!140;CL:0002032!1.32e-07!165;CL:0000837!1.32e-07!165;CL:0000037!3.27e-07!172;CL:0000566!3.27e-07!172;CL:0000840!3.80e-07!5;CL:0001029!3.80e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;6.67e-33;5!CL:0000990;1.25e-18;8!CL:0000451;2.25e-15;10!CL:0000945;2.54e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.67e-33,5;CL:0000990,1.25e-18,8;CL:0000451,2.25e-15,10;CL:0000988,1.32e-11,177;CL:0000838,1.08e-08,52;CL:0000542,1.57e-08,53;CL:0000051,1.57e-08,53;CL:0000738,6.77e-08,136;CL:0000945,2.62e-07,24;CL:0000826,2.62e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!3.76e-11!1;DOID:0060061!3.76e-11!1;DOID:8691!3.76e-11!1;DOID:630!4.15e-11!1;DOID:0050177!4.15e-11!1;DOID:0050427!4.15e-11!1;DOID:0060058!3.13e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.06e-19;1!DOID:0050177;2.06e-19;1!DOID:0060060;2.06e-19;1!DOID:0060061;2.06e-19;1!DOID:0050427;2.06e-19;1!DOID:8691;2.06e-19;1!DOID:0060058;3.83e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.88e-19,1;DOID:0060061,1.88e-19,1;DOID:8691,1.88e-19,1;DOID:630,2.25e-19,1;DOID:0050177,2.25e-19,1;DOID:0050427,2.25e-19,1;DOID:0060058,3.63e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002331!1.73e-09!10;UBERON:0000358!1.73e-09!10;UBERON:0000307!1.73e-09!10;UBERON:0000091!1.73e-09!10;UBERON:0000087!1.73e-09!10;UBERON:0007806!1.73e-09!10;UBERON:0008780!1.73e-09!10;UBERON:0005728!1.73e-09!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.59e-17;10!UBERON:0000178;1.14e-11;15!UBERON:0000179;1.14e-11;15!UBERON:0000463;1.14e-11;15!UBERON:0000478;1.65e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.59e-17,10;UBERON:0000358,3.59e-17,10;UBERON:0000307,3.59e-17,10;UBERON:0000091,3.59e-17,10;UBERON:0000087,3.59e-17,10;UBERON:0007010,3.59e-17,10;UBERON:0007806,3.59e-17,10;UBERON:0008780,3.59e-17,10;UBERON:0005728,3.59e-17,10;UBERON:0000178,1.14e-11,15;UBERON:0000179,1.14e-11,15;UBERON:0000463,1.14e-11,15;UBERON:0000478,1.65e-07,24 | |||
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|short_description=p7@GPR133 | |short_description=p7@GPR133 | ||
}} | }} |
Latest revision as of 09:22, 17 September 2015
Short description: | p7@GPR133 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GPR133_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 17bp_to_ENST00000536988_5end |
EntrezGene: | GPR133 |
HGNC: | 19893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.67e-33 | 5 |
conventional dendritic cell | 1.25e-18 | 8 |
dendritic cell | 2.25e-15 | 10 |
hematopoietic cell | 1.32e-11 | 177 |
lymphoid lineage restricted progenitor cell | 1.08e-08 | 52 |
lymphocyte | 1.57e-08 | 53 |
common lymphoid progenitor | 1.57e-08 | 53 |
leukocyte | 6.77e-08 | 136 |
lymphocyte of B lineage | 2.62e-07 | 24 |
pro-B cell | 2.62e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.59e-17 | 10 |
blastocyst | 3.59e-17 | 10 |
blastula | 3.59e-17 | 10 |
bilaminar disc | 3.59e-17 | 10 |
inner cell mass | 3.59e-17 | 10 |
cleaving embryo | 3.59e-17 | 10 |
connecting stalk | 3.59e-17 | 10 |
inner cell mass derived epiblast | 3.59e-17 | 10 |
extraembryonic mesoderm | 3.59e-17 | 10 |
blood | 1.14e-11 | 15 |
haemolymphatic fluid | 1.14e-11 | 15 |
organism substance | 1.14e-11 | 15 |
extraembryonic structure | 1.65e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.88e-19 | 1 |
cutaneous T cell lymphoma | 1.88e-19 | 1 |
mycosis fungoides | 1.88e-19 | 1 |
genetic disease | 2.25e-19 | 1 |
monogenic disease | 2.25e-19 | 1 |
xeroderma pigmentosum | 2.25e-19 | 1 |
lymphoma | 3.63e-08 | 10 |