FFCP PHASE1:Hg19::chr12:26274917..26274929,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8082 | |EntrezGene=8082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11322 | |HGNC=11322 | ||
|TSSclassifier=strong | |||
|UniProt=F5H381 | |UniProt=F5H381 | ||
|association_with_transcript=0bp_to_ENST00000538142_5end | |association_with_transcript=0bp_to_ENST00000538142_5end | ||
|cluster_id=chr12:26274917..26274929,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_SSPN_5end | |description=CAGE_peak_5_at_SSPN_5end | ||
|id=chr12:26274917..26274929,+ | |id=chr12:26274917..26274929,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.98e-14!14;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | |ontology_enrichment_celltype=CL:0000236!5.98e-14!14;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.86e-54;13!CL:0000945;9.36e-34;24!CL:0000542;3.20e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.77e-50,14;CL:0000945,8.72e-34,24;CL:0000826,8.72e-34,24;CL:0000542,1.88e-16,53;CL:0000051,1.88e-16,53;CL:0000838,2.76e-14,52;CL:0000738,1.11e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;3.20e-12;53!UBERON:0001045;3.39e-07;1!UBERON:0006298;8.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;4.70e-07;1!DOID:0070004;4.70e-07;1!DOID:12603;4.70e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.57e-07,1;DOID:0070004,4.57e-07,1;DOID:12603,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-30!115;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0000178!3.01e-07!15;UBERON:0000179!3.01e-07!15;UBERON:0000463!3.01e-07!15;UBERON:0002616!3.87e-07!59;UBERON:0000955!8.50e-07!69;UBERON:0006238!8.50e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.07e-13;15!UBERON:0000179;8.07e-13;15!UBERON:0000463;8.07e-13;15!UBERON:0002390;4.93e-09;32!UBERON:0002193;3.60e-08;42!UBERON:0002372;2.92e-07;1!UBERON:0001961;2.92e-07;1!UBERON:0001744;2.92e-07;1!UBERON:0001042;2.92e-07;1!UBERON:0001735;2.92e-07;1!UBERON:0001154;3.39e-07;1!UBERON:0001153;3.39e-07;1!UBERON:0009854;3.39e-07;1!UBERON:0000029;4.70e-07;1!UBERON:0001736;8.67e-07;1!UBERON:0002171;8.67e-07;1!UBERON:0006518;8.67e-07;1!UBERON:0008949;8.67e-07;1!UBERON:0000101;8.67e-07;1!UBERON:0002167;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.80e-13,15;UBERON:0000179,8.80e-13,15;UBERON:0000463,8.80e-13,15;UBERON:0007023,5.04e-08,114;UBERON:0002372,3.01e-07,1;UBERON:0001961,3.01e-07,1;UBERON:0001744,3.01e-07,1;UBERON:0001735,3.01e-07,1;UBERON:0001154,3.40e-07,1;UBERON:0001153,3.40e-07,1;UBERON:0001045,3.40e-07,1;UBERON:0000029,3.82e-07,1;UBERON:0001736,8.67e-07,1;UBERON:0006298,8.67e-07,1;UBERON:0002171,9.18e-07,1;UBERON:0006518,9.18e-07,1;UBERON:0008949,9.18e-07,1;UBERON:0000101,9.18e-07,1;UBERON:0002167,9.18e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,15.8380197266018,13.3426388079533,18.3493995703598,13.2130675721884,12.6445536789986,5.94940385506376,10.494591299889,5.69212969109448,8.22132065119314,12.2327433000073,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.545492241181669,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,2.48649308061621,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,1.02341449813341,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,3.09701308095126,1.23408681925858,1.94541993357815,3.24018862342869,0.79312517629427,0,0,0.245040215981032,3.53026032738866,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0.333926115068718,0,0,0.597743964753209,4.97311047956066,0.251932747854276,0,0.738508832766417,0,0.179736702294654,0,0,0.690503839458535,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0.307801034015188,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,3.98104772431402,0.707660516026713,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0.252746318513952,0,0,0,0,0,0,1.70765727617876,0,0.347119476670262,0,0,0,0,0,0,0,0.872901148395775,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,3.0952078182318,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.106787412567695,0,1.24271716604159,3.96932817449561,6.52118385263216,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.654261577023377,0,0.491545817507439,0,0,0,3.61651457287713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0.295712172434091,0.202612753855184,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0.255524855279191,0,0.336283722218824,0.606965604236632,0.682986574053893,0.266107110487916,0.230467975111559,0,0,0.0657727735628491,0,0.778619813244484,0.549451649953598,0,0,0,0,0.47775168788705,0.285906176706625,0,0.929931402945002,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,5.13314034281235,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0.235676547101626,0,0.594092800654172,0,0.169927114687817,3.66537280121429,0,0,0,0.705789743431384,0.0802413666891683,0,1.37618785021362,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0,0,0.186224142887574,0.224263725161227,0,0,0.435433495793923,0,5.18610808212324,0.717222053926764,0,0.0814032686109745,0,0,0,0,0.488965776731466,0,0,3.22038069745642,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,15.8380197266018,13.3426388079533,18.3493995703598,13.2130675721884,12.6445536789986,5.94940385506376,10.494591299889,5.69212969109448,8.22132065119314,12.2327433000073,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.545492241181669,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,2.48649308061621,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,1.02341449813341,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,3.09701308095126,1.23408681925858,1.94541993357815,3.24018862342869,0.79312517629427,0,0,0.245040215981032,3.53026032738866,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0.333926115068718,0,0,0.597743964753209,4.97311047956066,0.251932747854276,0,0.738508832766417,0,0.179736702294654,0,0,0.690503839458535,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0.278847488557207,0.307801034015188,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,3.98104772431402,0.707660516026713,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,0,0.252746318513952,0,0,0,0,0,0,1.70765727617876,0,0.347119476670262,0,0,0,0,0,0,0,0.872901148395775,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,3.0952078182318,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.106787412567695,0,1.24271716604159,3.96932817449561,6.52118385263216,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.654261577023377,0,0.491545817507439,0,0,0,3.61651457287713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0.295712172434091,0.202612753855184,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0.255524855279191,0,0.336283722218824,0.606965604236632,0.682986574053893,0.266107110487916,0.230467975111559,0,0,0.0657727735628491,0,0.778619813244484,0.549451649953598,0,0,0,0,0.47775168788705,0.285906176706625,0,0.929931402945002,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,5.13314034281235,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0.235676547101626,0,0.594092800654172,0,0.169927114687817,3.66537280121429,0,0,0,0.705789743431384,0.0802413666891683,0,1.37618785021362,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.852935927603924,0,0,0.186224142887574,0.224263725161227,0,0,0.435433495793923,0,5.18610808212324,0.717222053926764,0,0.0814032686109745,0,0,0,0,0.488965776731466,0,0,3.22038069745642,0 | ||
|short_description=p5@SSPN | |short_description=p5@SSPN | ||
}} | }} |
Latest revision as of 23:17, 17 September 2015
Short description: | p5@SSPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SSPN_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000538142_5end |
EntrezGene: | SSPN |
HGNC: | 11322 |
UniProt: | F5H381 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.77e-50 | 14 |
lymphocyte of B lineage | 8.72e-34 | 24 |
pro-B cell | 8.72e-34 | 24 |
lymphocyte | 1.88e-16 | 53 |
common lymphoid progenitor | 1.88e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.76e-14 | 52 |
leukocyte | 1.11e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 8.80e-13 | 15 |
haemolymphatic fluid | 8.80e-13 | 15 |
organism substance | 8.80e-13 | 15 |
adult organism | 5.04e-08 | 114 |
tonsil | 3.01e-07 | 1 |
mucosa-associated lymphoid tissue | 3.01e-07 | 1 |
lymphoid tissue | 3.01e-07 | 1 |
tonsillar ring | 3.01e-07 | 1 |
vermiform appendix | 3.40e-07 | 1 |
caecum | 3.40e-07 | 1 |
midgut | 3.40e-07 | 1 |
lymph node | 3.82e-07 | 1 |
submandibular gland | 8.67e-07 | 1 |
submandibular gland primordium | 8.67e-07 | 1 |
lower lobe of right lung | 9.18e-07 | 1 |
right lung lobe | 9.18e-07 | 1 |
lower lobe of lung | 9.18e-07 | 1 |
lobe of lung | 9.18e-07 | 1 |
right lung | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.57e-07 | 1 |
myeloma | 4.57e-07 | 1 |
acute leukemia | 4.85e-07 | 1 |