FFCP PHASE1:Hg19::chr12:32259603..32259610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=636 | |EntrezGene=636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |HGNC=1049 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-158bp_to_ENST00000551848_5end | |association_with_transcript=-158bp_to_ENST00000551848_5end | ||
|cluster_id=chr12:32259603..32259610,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_7_at_BICD1_5end | |description=CAGE_peak_7_at_BICD1_5end | ||
|id=chr12:32259603..32259610,+ | |id=chr12:32259603..32259610,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.06e-61;5!CL:0002321;1.43e-20;15!CL:0000039;5.02e-17;7!CL:0000586;5.02e-17;7!CL:0000148;1.11e-11;10!CL:0000147;1.68e-08;14!CL:0000047;1.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.34e-61,5;CL:0000039,5.16e-17,7;CL:0000586,5.16e-17,7;CL:0000148,1.22e-11,10;CL:0000541,1.22e-11,10;CL:0000147,1.79e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.23e-12;10!UBERON:0005564;4.23e-12;10 | |||
|ontology_enrichment_disease=DOID:0050687!4.45e-07!143;DOID:305!7.67e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.95e-14;22!DOID:2994;2.95e-14;22!DOID:3307;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22;DOID:3307,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.80e-11!94;UBERON:0001016!1.80e-11!94;UBERON:0001017!7.52e-11!82;UBERON:0005743!2.55e-10!86;UBERON:0001049!1.73e-08!57;UBERON:0005068!1.73e-08!57;UBERON:0006241!1.73e-08!57;UBERON:0007135!1.73e-08!57;UBERON:0000955!8.68e-08!69;UBERON:0006238!8.68e-08!69;UBERON:0003075!1.93e-07!86;UBERON:0007284!1.93e-07!86;UBERON:0001893!2.42e-07!34;UBERON:0002780!4.62e-07!41;UBERON:0001890!4.62e-07!41;UBERON:0006240!4.62e-07!41;UBERON:0002346!5.40e-07!90;UBERON:0002020!5.78e-07!34;UBERON:0003528!5.78e-07!34;UBERON:0002616!5.82e-07!59;UBERON:0002791!7.14e-07!33;UBERON:0001869!8.96e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.62e-15;8!UBERON:0000922;4.62e-13;49!UBERON:0003135;4.73e-11;11!UBERON:0001905;1.81e-07;2!UBERON:0002757;1.81e-07;2!UBERON:0010134;1.81e-07;2!UBERON:0005408;1.81e-07;2!UBERON:0001899;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.76e-15,8;UBERON:0003135,4.81e-11,11;UBERON:0001905,2.25e-07,2;UBERON:0002757,2.25e-07,2;UBERON:0010134,2.25e-07,2;UBERON:0005408,2.25e-07,2;UBERON:0001899,2.25e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0.684372125364421,0.627713197974014,0.382067028739756,0,0.236132343941038,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,2.27685187643779,0,0,0,0,0,0.196709770113833,0,0,0.334372990781356,0,0,0,0,0.589211814949674,0,0,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,3.04934265323988,1.32529768321485,1.39432731443422,1.14027160516907,1.00928340350251,0.72995471815166,0,0,0,0,0,0.118306800039844,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0.858486162094873,0,0.234004265139238,0,0,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.308482478109971,0,0,0,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0.300946099727719,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.246381468041427,0,0,0.120859449591622,0,0.276242966807689,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.462145851343933,0.15350367472613,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0.577076851905779,0.0711418433484141,0.159426272728822,0,0.766021480529467,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.568272293612826,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0.552567831062295,0,0.818149460017238,0.246169610922139,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0.241192877250816,0,0.552896299656123,0.591095237907095,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0.216388639742091,0.995261931078505,0,0,0.296521128680622,0.123563938946503,0,0.202203398942031,0,0.468528891450678,0.547364367646998,0.782658475728359,0.242780379534093,0,0,0.61214552326098,0.31593289814244,0.150323419414493,0.414752765588989,0,0,0.313932918407225,0,0.284609546029793,0.277349346026277,0.173559738335131,0.0979923974143777,0,0.52418000472609,0.171986032471617,0.19351266257817,0,0.246346371159628,0,0,0,0,0.19871461170299,0.253243183823515,0.586654148204409,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0,0.248505071130865,0,0.543616824294456,0,0.101998217636322,0,0,0.273810757783986,0,0.859530882839914,0.262887354279314,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0.160753148465019,0.687697182986169,0.83088067605837,0,0,0.182248669974074,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0,0,0.197611631897944,0.730755590285376,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,4.01211041315069,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0.15543720058278,0,0,0.449803112163605,0.310525913752519,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0.639471856518258,0.431299245586727,0.157265941855896,0.764467467344097,0,0,0,0,0,0.236585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| ||
|short_description=p7@BICD1 | |short_description=p7@BICD1 | ||
}} | }} |
Latest revision as of 04:31, 18 September 2015
Short description: | p7@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BICD1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -158bp_to_ENST00000551848_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.34e-61 | 5 |
germ line cell | 5.16e-17 | 7 |
germ cell | 5.16e-17 | 7 |
melanocyte | 1.22e-11 | 10 |
melanoblast | 1.22e-11 | 10 |
pigment cell | 1.79e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 5.76e-15 | 8 |
male reproductive organ | 4.81e-11 | 11 |
pineal body | 2.25e-07 | 2 |
regional part of epithalamus | 2.25e-07 | 2 |
secretory circumventricular organ | 2.25e-07 | 2 |
circumventricular organ | 2.25e-07 | 2 |
epithalamus | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.39e-14 | 22 |
germ cell cancer | 2.39e-14 | 22 |
teratoma | 1.36e-07 | 2 |