FFCP PHASE1:Mm9::chr2:29659138..29659154,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=493 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29659138..29659154,+ | |||
|description=CAGE_peak_at_chr2:29659138..29659154,+ | |description=CAGE_peak_at_chr2:29659138..29659154,+ | ||
|id=chr2:29659138..29659154,+ | |id=chr2:29659138..29659154,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.49e-10!6;CL:0000677!1.49e-10!6;CL:0000212!1.49e-10!6;CL:0000584!1.49e-10!6;CL:0000075!5.60e-09!7;CL:0000473!4.07e-08!3;CL:0000627!4.07e-08!3;CL:0000682!4.07e-08!3;CL:0002563!7.09e-07!9;CL:0002251!7.09e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.86e-14,3;CL:0000239,1.74e-13,6;CL:0000677,1.74e-13,6;CL:0000584,1.74e-13,6;CL:0000075,1.39e-11,7;CL:0002563,4.90e-09,9;CL:0002251,4.90e-09,9;CL:0000066,1.01e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.88e-18!15;UBERON:0000160!1.02e-17!43;UBERON:0001242!4.62e-14!13;UBERON:0000060!4.62e-14!13;UBERON:0001262!4.62e-14!13;UBERON:0004786!4.62e-14!13;UBERON:0005409!7.11e-13!59;UBERON:0004923!2.97e-10!24;UBERON:0000331!1.46e-07!3;UBERON:0002116!1.46e-07!3;UBERON:0001204!1.46e-07!3;UBERON:0001168!1.46e-07!3;UBERON:0003350!7.09e-07!9;UBERON:0004808!7.09e-07!9;UBERON:0001277!7.09e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.55e-20,31;UBERON:0000344,1.36e-19,15;UBERON:0001242,1.33e-17,13;UBERON:0001262,1.33e-17,13;UBERON:0004786,1.33e-17,13;UBERON:0005409,1.11e-12,47;UBERON:0004923,7.05e-12,24;UBERON:0003350,4.90e-09,9;UBERON:0004808,4.90e-09,9;UBERON:0001277,4.90e-09,9;UBERON:0000485,2.07e-07,11;UBERON:0000331,5.92e-07,3;UBERON:0002116,5.92e-07,3;UBERON:0001204,5.92e-07,3;UBERON:0001168,5.92e-07,3 | |||
|phase1_expression=0,4.18770489167233,5.0049916332849,6.65421264875026,5.00895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.68822784320151,3.44539178469012,1.29228598847722,1.72376986148711,2.28028103347649,1.26015064879965,0.221730510655305,0,0,0,0,0,0,0,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0996043443938,0,0,0,0,0,0,0,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,2.3800550999719,0,0,0,0,0.22237804384487,0.380451252225118,1.42358718463353,0.494096864172033,0,0,0.19496408711912,0.898819408654221,1.51296634912286,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,4.18770489167233,5.0049916332849,6.65421264875026,5.00895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.68822784320151,3.44539178469012,1.29228598847722,1.72376986148711,2.28028103347649,1.26015064879965,0.221730510655305,0,0,0,0,0,0,0,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0996043443938,0,0,0,0,0,0,0,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,2.3800550999719,0,0,0,0,0.22237804384487,0.380451252225118,1.42358718463353,0.494096864172033,0,0,0.19496408711912,0.898819408654221,1.51296634912286,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr2:29659138..29659154,+ | |short_description=p@chr2:29659138..29659154,+ | ||
}} | }} |
Latest revision as of 23:36, 4 August 2015
Short description: | p@chr2:29659138..29659154, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:29659138..29659154, + |
Coexpression cluster: | MCL_coexpression_mm9:493 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.86e-14 | 3 |
brush border epithelial cell | 1.74e-13 | 6 |
gut absorptive cell | 1.74e-13 | 6 |
enterocyte | 1.74e-13 | 6 |
columnar/cuboidal epithelial cell | 1.39e-11 | 7 |
intestinal epithelial cell | 4.90e-09 | 9 |
epithelial cell of alimentary canal | 4.90e-09 | 9 |
epithelial cell | 1.01e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.55e-20 | 31 |
mucosa | 1.36e-19 | 15 |
intestinal mucosa | 1.33e-17 | 13 |
wall of intestine | 1.33e-17 | 13 |
gastrointestinal system mucosa | 1.33e-17 | 13 |
gastrointestinal system | 1.11e-12 | 47 |
organ component layer | 7.05e-12 | 24 |
epithelium of mucosa | 4.90e-09 | 9 |
gastrointestinal system epithelium | 4.90e-09 | 9 |
intestinal epithelium | 4.90e-09 | 9 |
simple columnar epithelium | 2.07e-07 | 11 |
ileal mucosa | 5.92e-07 | 3 |
ileum | 5.92e-07 | 3 |
mucosa of small intestine | 5.92e-07 | 3 |
wall of small intestine | 5.92e-07 | 3 |