FFCP PHASE1:Mm9::chr2:69660587..69660602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=277396 | |EntrezGene=277396 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1780 | |||
|TSSclassifier=NA | |||
|UniProt=Q6GQU2 | |UniProt=Q6GQU2 | ||
|association_with_transcript=160bp_to_ENSMUST00000053087,NM_177784,uc008jys.2_5end | |association_with_transcript=160bp_to_ENSMUST00000053087,NM_177784,uc008jys.2_5end | ||
|cluster_id=chr2:69660587..69660602,+ | |||
|description=CAGE_peak_6_at_Klhl23_5end | |description=CAGE_peak_6_at_Klhl23_5end | ||
|id=chr2:69660587..69660602,+ | |id=chr2:69660587..69660602,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.56e-07!23;CL:0000337!1.56e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.22e-14,23;CL:0000337,8.22e-14,23;CL:0002609,2.53e-12,6;CL:0002608,2.69e-10,3;CL:0002612,4.38e-10,3;CL:0000540,5.69e-09,33;CL:0000047,5.69e-09,33;CL:0000031,5.69e-09,33;CL:0000404,5.69e-09,33;CL:0000393,2.89e-07,39;CL:0000211,2.89e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.64e-09!71;UBERON:0003075!1.64e-09!71;UBERON:0007284!1.64e-09!71;UBERON:0002020!1.83e-09!34;UBERON:0001049!2.77e-09!52;UBERON:0005068!2.77e-09!52;UBERON:0006241!2.77e-09!52;UBERON:0007135!2.77e-09!52;UBERON:0001017!1.41e-08!73;UBERON:0005743!1.41e-08!73;UBERON:0003056!1.86e-08!49;UBERON:0004121!2.67e-08!102;UBERON:0000924!2.67e-08!102;UBERON:0006601!2.67e-08!102;UBERON:0000073!4.56e-08!75;UBERON:0001016!4.56e-08!75;UBERON:0003080!9.85e-08!40;UBERON:0002780!2.07e-07!39;UBERON:0001890!2.07e-07!39;UBERON:0006240!2.07e-07!39;UBERON:0002791!2.22e-07!29;UBERON:0003528!2.22e-07!29;UBERON:0001893!2.22e-07!29;UBERON:0000033!2.45e-07!63;UBERON:0000956!5.66e-07!21;UBERON:0001869!5.66e-07!21;UBERON:0000203!5.66e-07!21;UBERON:0000955!7.36e-07!50;UBERON:0006238!7.36e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.51e-17,34;UBERON:0003528,9.30e-13,29;UBERON:0002791,9.30e-13,29;UBERON:0001893,9.30e-13,29;UBERON:0000956,1.46e-12,21;UBERON:0001869,1.46e-12,21;UBERON:0000203,1.46e-12,21;UBERON:0001954,3.37e-11,7;UBERON:0003022,3.37e-11,7;UBERON:0002421,3.37e-11,7;UBERON:0000349,3.37e-11,7;UBERON:0002600,3.37e-11,7;UBERON:0002619,1.64e-10,17;UBERON:0001049,4.13e-10,52;UBERON:0005068,4.13e-10,52;UBERON:0006241,4.13e-10,52;UBERON:0007135,4.13e-10,52;UBERON:0002257,4.38e-10,3;UBERON:0000073,1.28e-09,54;UBERON:0002780,7.34e-09,39;UBERON:0001890,7.34e-09,39;UBERON:0006240,7.34e-09,39;UBERON:0002346,9.61e-09,64;UBERON:0003075,9.61e-09,64;UBERON:0007284,9.61e-09,64;UBERON:0003080,1.40e-08,40;UBERON:0001017,1.92e-08,73;UBERON:0001016,4.03e-08,75;UBERON:0003056,1.00e-07,49;UBERON:0010371,2.98e-07,73;UBERON:0002616,3.77e-07,46;UBERON:0000955,6.01e-07,47;UBERON:0006238,6.01e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,1.05162480675691,0.571301968807607,0.220868540951614,1.83736198822431,2.30029130443767,3.67687514644008,0,0.127687338085188,0.153606533256243,0.527545150920775,0.731901148819277,1.56274011167028,0.279182999001381,0,0.15279824777681,1.47314292736834,2.98980529678116,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.239630249011841,0,0,0.599162557619291,0,6.03140890141749,0.347648640384553,0,0.20778804455956,0.162241263067758,0.305518091550949,0,0.758168275301024,0.420883711772948,0.650602214813519,0,0.360124259610698,0.150704817835715,0.136072998302656,0.768682321709099,0.187403449119458,1.03481348295606,1.29340795759705,0.945530400839096,0.175951124163949,0.219195732427575,1.11218899690239,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.350296027101508,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0,1.26173969138476,5.24813523134351,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0.390267295715598,0.472905432318573,0,0.318909537314974,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.234423373184406,0.491804836130026,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.776152102696527,0.857348140126369,0.709360934569094,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,1.12738587736838,0.448549638131936,0.827292452285488,1.36115831840833,0.516639293910924,0.844780627453891,0.938857909166032,1.0416350787516,1.25831213310853,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,2.29158205375759,2.92150409984269,0.685082519770642,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,1.26348605881899,0.25347929989024,0.565879024158229,0.749132059759059,0.576226371643824,0.689225627467359,0.952587382566147,1.15884325944855,0.38581844092741,1.64834360321323,1.17759136107518,0,0.354951612318675,0.238436189947321,0.872078499793971,0.658765662907314,0.25384382367503,0.548783918618318,0.526139422875686,1.49384525230448,0.561142271657738,0.474540072496697,0.197008964751127,0,0.309873682371932,0.578719832943424,1.24905288968973,0.701794825336225,0.859484216193193,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,1.05162480675691,0.571301968807607,0.220868540951614,1.83736198822431,2.30029130443767,3.67687514644008,0,0.127687338085188,0.153606533256243,0.527545150920775,0.731901148819277,1.56274011167028,0.279182999001381,0,0.15279824777681,1.47314292736834,2.98980529678116,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.239630249011841,0,0,0.599162557619291,0,6.03140890141749,0.347648640384553,0,0.20778804455956,0.162241263067758,0.305518091550949,0,0.758168275301024,0.420883711772948,0.650602214813519,0,0.360124259610698,0.150704817835715,0.136072998302656,0.768682321709099,0.187403449119458,1.03481348295606,1.29340795759705,0.945530400839096,0.175951124163949,0.219195732427575,1.11218899690239,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0,0,0.196764231747404,0.308534225774757,0.465067889500816,0,0.350296027101508,0,0.32833492815819,0.162137619091711,0.146199987425332,0,0,1.26173969138476,5.24813523134351,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0.390267295715598,0.472905432318573,0,0.318909537314974,0,0.345369963731791,0,0,0,0,0,0.321101179975584,0.234423373184406,0.491804836130026,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.776152102696527,0.857348140126369,0.709360934569094,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0.241251699712623,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,1.12738587736838,0.448549638131936,0.827292452285488,1.36115831840833,0.516639293910924,0.844780627453891,0.938857909166032,1.0416350787516,1.25831213310853,0.483168241652012,0,0,0.405450430580328,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.920650473014354,2.29158205375759,2.92150409984269,0.685082519770642,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,1.26348605881899,0.25347929989024,0.565879024158229,0.749132059759059,0.576226371643824,0.689225627467359,0.952587382566147,1.15884325944855,0.38581844092741,1.64834360321323,1.17759136107518,0,0.354951612318675,0.238436189947321,0.872078499793971,0.658765662907314,0.25384382367503,0.548783918618318,0.526139422875686,1.49384525230448,0.561142271657738,0.474540072496697,0.197008964751127,0,0.309873682371932,0.578719832943424,1.24905288968973,0.701794825336225,0.859484216193193,0.191288332068843,0.220591419119515,0 | ||
|short_description=p6@Klhl23 | |short_description=p6@Klhl23 | ||
}} | }} |
Latest revision as of 21:47, 26 September 2015
Short description: | p6@Klhl23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Klhl23_5end |
Coexpression cluster: | MCL_coexpression_mm9:1780 |
Association with transcript: | 160bp_to_ENSMUST00000053087, NM_177784, uc008jys.2_5end |
EntrezGene: | Klhl23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.22e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.22e-14 | 23 |
neuron of cerebral cortex | 2.53e-12 | 6 |
hippocampal neuron | 2.69e-10 | 3 |
neuron of the ventral spinal cord | 4.38e-10 | 3 |
neuron | 5.69e-09 | 33 |
neuronal stem cell | 5.69e-09 | 33 |
neuroblast | 5.69e-09 | 33 |
electrically signaling cell | 5.69e-09 | 33 |
electrically responsive cell | 2.89e-07 | 39 |
electrically active cell | 2.89e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.51e-17 | 34 |
brain grey matter | 9.30e-13 | 29 |
regional part of telencephalon | 9.30e-13 | 29 |
telencephalon | 9.30e-13 | 29 |
cerebral cortex | 1.46e-12 | 21 |
cerebral hemisphere | 1.46e-12 | 21 |
pallium | 1.46e-12 | 21 |
Ammon's horn | 3.37e-11 | 7 |
lobe parts of cerebral cortex | 3.37e-11 | 7 |
hippocampal formation | 3.37e-11 | 7 |
limbic system | 3.37e-11 | 7 |
limbic lobe | 3.37e-11 | 7 |
regional part of cerebral cortex | 1.64e-10 | 17 |
neural tube | 4.13e-10 | 52 |
neural rod | 4.13e-10 | 52 |
future spinal cord | 4.13e-10 | 52 |
neural keel | 4.13e-10 | 52 |
ventral horn of spinal cord | 4.38e-10 | 3 |
regional part of nervous system | 1.28e-09 | 54 |
regional part of forebrain | 7.34e-09 | 39 |
forebrain | 7.34e-09 | 39 |
future forebrain | 7.34e-09 | 39 |
neurectoderm | 9.61e-09 | 64 |
neural plate | 9.61e-09 | 64 |
presumptive neural plate | 9.61e-09 | 64 |
anterior neural tube | 1.40e-08 | 40 |
central nervous system | 1.92e-08 | 73 |
nervous system | 4.03e-08 | 75 |
pre-chordal neural plate | 1.00e-07 | 49 |
ecto-epithelium | 2.98e-07 | 73 |
regional part of brain | 3.77e-07 | 46 |
brain | 6.01e-07 | 47 |
future brain | 6.01e-07 | 47 |