FFCP PHASE1:Mm9::chr1:168184226..168184287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100039795 | |EntrezGene=100039795 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q9U5,B5TVM2,B5TVM4,B5TVM5,B5TVM9 | |UniProt=E9Q9U5,B5TVM2,B5TVM4,B5TVM5,B5TVM9 | ||
|association_with_transcript=0bp_to_ENSMUST00000111416,NM_001164528,uc011wvd.1,uc011wve.1,uc011wvf.1,uc011wvg.1,uc011wvh.1,uc011wvi.1,uc011wvj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000111416,NM_001164528,uc011wvd.1,uc011wve.1,uc011wvf.1,uc011wvg.1,uc011wvh.1,uc011wvi.1,uc011wvj.1_5end | ||
|cluster_id=chr1:168184226..168184287,+ | |||
|description=CAGE_peak_2_at_Ildr2_5end | |description=CAGE_peak_2_at_Ildr2_5end | ||
|id=chr1:168184226..168184287,+ | |id=chr1:168184226..168184287,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.99e-14!50;CL:0002319!5.74e-11!43;CL:0000393!1.47e-10!39;CL:0000211!1.47e-10!39;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0000540!2.44e-08!33;CL:0000047!2.44e-08!33;CL:0000031!2.44e-08!33;CL:0000404!2.44e-08!33;CL:0000117!4.83e-08!23;CL:0000337!4.83e-08!23 | |ontology_enrichment_celltype=CL:0000055!7.99e-14!50;CL:0002319!5.74e-11!43;CL:0000393!1.47e-10!39;CL:0000211!1.47e-10!39;CL:0000221!1.93e-10!44;CL:0000133!1.93e-10!44;CL:0000540!2.44e-08!33;CL:0000047!2.44e-08!33;CL:0000031!2.44e-08!33;CL:0000404!2.44e-08!33;CL:0000117!4.83e-08!23;CL:0000337!4.83e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.51e-11,43;CL:0000393,3.36e-11,39;CL:0000211,3.36e-11,39;CL:0000221,9.48e-11,44;CL:0000133,9.48e-11,44;CL:0000117,9.92e-09,23;CL:0000337,9.92e-09,23;CL:0000540,1.21e-08,33;CL:0000047,1.21e-08,33;CL:0000031,1.21e-08,33;CL:0000404,1.21e-08,33;CL:0002321,7.02e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.55e-23!73;UBERON:0005743!2.55e-23!73;UBERON:0000073!2.01e-22!75;UBERON:0001016!2.01e-22!75;UBERON:0004121!2.42e-22!102;UBERON:0000924!2.42e-22!102;UBERON:0006601!2.42e-22!102;UBERON:0002346!8.83e-20!71;UBERON:0003075!8.83e-20!71;UBERON:0007284!8.83e-20!71;UBERON:0000033!3.87e-18!63;UBERON:0003056!7.02e-17!49;UBERON:0000955!8.07e-17!50;UBERON:0006238!8.07e-17!50;UBERON:0001049!1.72e-16!52;UBERON:0005068!1.72e-16!52;UBERON:0006241!1.72e-16!52;UBERON:0007135!1.72e-16!52;UBERON:0002616!3.90e-16!49;UBERON:0000025!1.07e-13!114;UBERON:0003080!7.77e-13!40;UBERON:0002780!1.78e-12!39;UBERON:0001890!1.78e-12!39;UBERON:0006240!1.78e-12!39;UBERON:0004111!1.82e-11!122;UBERON:0002020!2.70e-10!34;UBERON:0002791!1.47e-08!29;UBERON:0003528!1.47e-08!29;UBERON:0001893!1.47e-08!29;UBERON:0000475!3.39e-07!200;UBERON:0007811!8.64e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.64e-25,73;UBERON:0004121,2.65e-24,95;UBERON:0000924,2.65e-24,95;UBERON:0006601,2.65e-24,95;UBERON:0001016,4.62e-24,75;UBERON:0002346,1.20e-22,64;UBERON:0003075,1.20e-22,64;UBERON:0007284,1.20e-22,64;UBERON:0000073,5.41e-20,54;UBERON:0003056,1.47e-18,49;UBERON:0001049,3.84e-18,52;UBERON:0005068,3.84e-18,52;UBERON:0006241,3.84e-18,52;UBERON:0007135,3.84e-18,52;UBERON:0010371,6.10e-18,73;UBERON:0000955,2.73e-16,47;UBERON:0006238,2.73e-16,47;UBERON:0010314,1.13e-15,92;UBERON:0002616,1.59e-15,46;UBERON:0003080,7.44e-14,40;UBERON:0002780,1.95e-13,39;UBERON:0001890,1.95e-13,39;UBERON:0006240,1.95e-13,39;UBERON:0000025,1.51e-11,114;UBERON:0002020,6.52e-11,34;UBERON:0004111,1.01e-09,122;UBERON:0003528,6.70e-09,29;UBERON:0002791,6.70e-09,29;UBERON:0001893,6.70e-09,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,3.14268486780495,5.68994931701213,16.4302182313088,1.52617609466313,2.41654801007919,3.69416808241138,27.7173114818218,5.75010257459886,0,0,0,2.31533492432352,4.29800159908135,10.8291139378263,1.82084814773638,6.34789175126439,2.53532561402472,2.37191172448392,19.5644855144451,0,0,0,5.69240209984969,9.60545763303886,0.829516898467821,1.08004750665353,1.47227472945967,3.71346279724945,4.19650227808066,2.69479758272899,2.20444583341944,2.75765635983006,7.70811166995721,9.83192503255945,7.52672012955593,4.61602007055678,2.47016637726506,1.56274011167028,3.35019598801657,6.19038871034848,6.57032465440283,5.89257170947335,4.8406371471695,1.4911955666024,0.227178579999552,0.529000920747499,2.6087803983151,6.0229671388697,0,2.69851595818909,6.49776417447669,7.6164570806547,4.63466586434781,0,0,0,0.14084341977668,0,0,0,0,0,0,6.2801133845483,2.07150306917737,1.48442139064825,0.346970653532272,0.304465478312141,1.15307748628029,0.60289056221049,1.52865319276416,1.63366568728578,1.73036477414062,2.4581890676385,1.76922110389975,0.485300549842228,0.441683036920787,0,0,2.04946557908083,1.8850203613211,0,0,0,0.127070227073065,3.2953940669061,1.83000241127451,1.63350657746724,4.17178368461463,4.60287823194595,6.2336413367868,6.48965052271031,3.7680564624617,1.49288364732112,2.27450482590307,1.47309299120532,3.513251959993,5.51765050640335,4.32149111532838,5.27466862425003,8.77670839052129,9.48041530107888,10.9631017734883,2.58703370739016,0.215567992932842,0.189106080167819,0,0,0.278047249225598,1.74126083261083,0.823128545631774,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,1.65721314909647,0.590292695242212,0.925602677324269,1.39520366850245,0.804820204198858,0.467061369468678,1.48103864922132,0.164167464079095,1.05389452409612,0.146199987425332,1.09775057645525,0.805238512562231,6.72927835405207,4.01327988279209,0,0.264450566663544,0.639864751605702,0,0.257734922644187,0.201683524623343,0.889512175379481,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,1.62921062276251,2.71533482034676,4.06787755363848,7.08249215791682,8.11855813887812,5.80895293013087,11.3525390808056,7.41131567717872,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,9.59799736199025,5.38192240565737,7.23665282045051,0.739012760666419,0,0.977789858652155,0.169745085775188,0.938760993154008,1.17254380209271,0.952174563544055,1.56106918286239,0.945810864637146,1.10732344824387,0.478364305972461,0.983179888294428,0.863424909329478,0.289298117163023,0,0,0,0,1.9266070798535,1.99259867206745,0.163934945376675,1.00988370881749,1.57754109708128,0.780877488593277,1.72338718186239,4.77937595905104,4.01037613348309,4.81230102341015,0.809621403349789,2.33804686329049,1.18586333383957,14.1381379225595,3.12268187458191,1.78065603667255,3.25773918707152,2.47455184458803,2.65490276679926,0.485561272309963,0.302323556964751,0.565815239267694,0,0.614870295887855,1.03371317267288,1.45413491791002,1.78248689192361,1.58018378967908,3.16255825724996,0,2.7235168460303,3.6012218806262,3.10460841078611,4.07240366560025,4.61084607469911,5.70780216326626,5.92376474167636,1.522324745573,0.23467170806371,0.42366414172764,0.661585194164886,0.65954501176592,1.13025098687134,1.08563264870681,0.477489376012546,0.656563598980245,0,2.78137953015765,0.170870880797853,1.23832120777933,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.944050424693745,0.743881101528023,0.26175594198403,0.388844919875379,0,0,1.04661582230785,0.496375471371293,0.777804753376191,1.16243841129958,0.675824501963113,0.704143431874524,4.03633593016245,2.62148361064277,0.483168241652012,1.15212002503146,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,2.70465431645067,2.62755465631655,0.36630324853453,0,0,5.64751842617067,2.30162618253588,3.43737308063638,7.04598047609119,2.05524755931193,1.5107877947794,2.70009000092722,0.900642406448441,5.43770890781046,5.1776031175182,1.03787347584177,3.19219898720825,0.341467211508268,1.21553358534147,0.838452650511929,1.47074806760011,1.11123363900808,1.44224540067226,1.28367683836726,0.758091635291392,1.52087579934144,1.50901073108861,1.31098110457835,0.89635213366817,0.689225627467359,2.38146845641537,1.73826488917283,2.89363830695558,0.824171801606613,1.91358596174717,0.685738504770831,0.354951612318675,1.1921809497366,1.0174249164263,0.846984423737976,1.01537529470012,0.548783918618318,1.05227884575137,0.814824683075171,1.12228454331548,1.54225523561426,1.97008964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| |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,3.14268486780495,5.68994931701213,16.4302182313088,1.52617609466313,2.41654801007919,3.69416808241138,27.7173114818218,5.75010257459886,0,0,0,2.31533492432352,4.29800159908135,10.8291139378263,1.82084814773638,6.34789175126439,2.53532561402472,2.37191172448392,19.5644855144451,0,0,0,5.69240209984969,9.60545763303886,0.829516898467821,1.08004750665353,1.47227472945967,3.71346279724945,4.19650227808066,2.69479758272899,2.20444583341944,2.75765635983006,7.70811166995721,9.83192503255945,7.52672012955593,4.61602007055678,2.47016637726506,1.56274011167028,3.35019598801657,6.19038871034848,6.57032465440283,5.89257170947335,4.8406371471695,1.4911955666024,0.227178579999552,0.529000920747499,2.6087803983151,6.0229671388697,0,2.69851595818909,6.49776417447669,7.6164570806547,4.63466586434781,0,0,0,0.14084341977668,0,0,0,0,0,0,6.2801133845483,2.07150306917737,1.48442139064825,0.346970653532272,0.304465478312141,1.15307748628029,0.60289056221049,1.52865319276416,1.63366568728578,1.73036477414062,2.4581890676385,1.76922110389975,0.485300549842228,0.441683036920787,0,0,2.04946557908083,1.8850203613211,0,0,0,0.127070227073065,3.2953940669061,1.83000241127451,1.63350657746724,4.17178368461463,4.60287823194595,6.2336413367868,6.48965052271031,3.7680564624617,1.49288364732112,2.27450482590307,1.47309299120532,3.513251959993,5.51765050640335,4.32149111532838,5.27466862425003,8.77670839052129,9.48041530107888,10.9631017734883,2.58703370739016,0.215567992932842,0.189106080167819,0,0,0.278047249225598,1.74126083261083,0.823128545631774,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,1.65721314909647,0.590292695242212,0.925602677324269,1.39520366850245,0.804820204198858,0.467061369468678,1.48103864922132,0.164167464079095,1.05389452409612,0.146199987425332,1.09775057645525,0.805238512562231,6.72927835405207,4.01327988279209,0,0.264450566663544,0.639864751605702,0,0.257734922644187,0.201683524623343,0.889512175379481,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,1.62921062276251,2.71533482034676,4.06787755363848,7.08249215791682,8.11855813887812,5.80895293013087,11.3525390808056,7.41131567717872,0.166845105716094,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0,0,0.274561413188081,0,0,0.312037673114561,9.59799736199025,5.38192240565737,7.23665282045051,0.739012760666419,0,0.977789858652155,0.169745085775188,0.938760993154008,1.17254380209271,0.952174563544055,1.56106918286239,0.945810864637146,1.10732344824387,0.478364305972461,0.983179888294428,0.863424909329478,0.289298117163023,0,0,0,0,1.9266070798535,1.99259867206745,0.163934945376675,1.00988370881749,1.57754109708128,0.780877488593277,1.72338718186239,4.77937595905104,4.01037613348309,4.81230102341015,0.809621403349789,2.33804686329049,1.18586333383957,14.1381379225595,3.12268187458191,1.78065603667255,3.25773918707152,2.47455184458803,2.65490276679926,0.485561272309963,0.302323556964751,0.565815239267694,0,0.614870295887855,1.03371317267288,1.45413491791002,1.78248689192361,1.58018378967908,3.16255825724996,0,2.7235168460303,3.6012218806262,3.10460841078611,4.07240366560025,4.61084607469911,5.70780216326626,5.92376474167636,1.522324745573,0.23467170806371,0.42366414172764,0.661585194164886,0.65954501176592,1.13025098687134,1.08563264870681,0.477489376012546,0.656563598980245,0,2.78137953015765,0.170870880797853,1.23832120777933,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.944050424693745,0.743881101528023,0.26175594198403,0.388844919875379,0,0,1.04661582230785,0.496375471371293,0.777804753376191,1.16243841129958,0.675824501963113,0.704143431874524,4.03633593016245,2.62148361064277,0.483168241652012,1.15212002503146,0,0.608175645870493,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0,0,2.70465431645067,2.62755465631655,0.36630324853453,0,0,5.64751842617067,2.30162618253588,3.43737308063638,7.04598047609119,2.05524755931193,1.5107877947794,2.70009000092722,0.900642406448441,5.43770890781046,5.1776031175182,1.03787347584177,3.19219898720825,0.341467211508268,1.21553358534147,0.838452650511929,1.47074806760011,1.11123363900808,1.44224540067226,1.28367683836726,0.758091635291392,1.52087579934144,1.50901073108861,1.31098110457835,0.89635213366817,0.689225627467359,2.38146845641537,1.73826488917283,2.89363830695558,0.824171801606613,1.91358596174717,0.685738504770831,0.354951612318675,1.1921809497366,1.0174249164263,0.846984423737976,1.01537529470012,0.548783918618318,1.05227884575137,0.814824683075171,1.12228454331548,1.54225523561426,1.97008964751127,1.22769312950907,0.929621047115796,0.771626443924566,3.2475375131933,1.40358965067245,1.93383948643468,0.956441660344217,1.54413993383661,0.695603506861264 | ||
|short_description=p2@Ildr2 | |short_description=p2@Ildr2 | ||
}} | }} |
Latest revision as of 17:38, 26 September 2015
Short description: | p2@Ildr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ildr2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000111416, NM_001164528, uc011wvd.1, uc011wve.1, uc011wvf.1, uc011wvg.1, uc011wvh.1, uc011wvi.1, uc011wvj.1_5end |
EntrezGene: | Ildr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.51e-11 | 43 |
electrically responsive cell | 3.36e-11 | 39 |
electrically active cell | 3.36e-11 | 39 |
ectodermal cell | 9.48e-11 | 44 |
neurectodermal cell | 9.48e-11 | 44 |
CNS neuron (sensu Vertebrata) | 9.92e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.92e-09 | 23 |
neuron | 1.21e-08 | 33 |
neuronal stem cell | 1.21e-08 | 33 |
neuroblast | 1.21e-08 | 33 |
electrically signaling cell | 1.21e-08 | 33 |
embryonic cell | 7.02e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.64e-25 | 73 |
ectoderm-derived structure | 2.65e-24 | 95 |
ectoderm | 2.65e-24 | 95 |
presumptive ectoderm | 2.65e-24 | 95 |
nervous system | 4.62e-24 | 75 |
neurectoderm | 1.20e-22 | 64 |
neural plate | 1.20e-22 | 64 |
presumptive neural plate | 1.20e-22 | 64 |
regional part of nervous system | 5.41e-20 | 54 |
pre-chordal neural plate | 1.47e-18 | 49 |
neural tube | 3.84e-18 | 52 |
neural rod | 3.84e-18 | 52 |
future spinal cord | 3.84e-18 | 52 |
neural keel | 3.84e-18 | 52 |
ecto-epithelium | 6.10e-18 | 73 |
brain | 2.73e-16 | 47 |
future brain | 2.73e-16 | 47 |
structure with developmental contribution from neural crest | 1.13e-15 | 92 |
regional part of brain | 1.59e-15 | 46 |
anterior neural tube | 7.44e-14 | 40 |
regional part of forebrain | 1.95e-13 | 39 |
forebrain | 1.95e-13 | 39 |
future forebrain | 1.95e-13 | 39 |
tube | 1.51e-11 | 114 |
gray matter | 6.52e-11 | 34 |
anatomical conduit | 1.01e-09 | 122 |
brain grey matter | 6.70e-09 | 29 |
regional part of telencephalon | 6.70e-09 | 29 |
telencephalon | 6.70e-09 | 29 |