Personal tools

FFCP PHASE1:Mm9::chr4:101091940..101091954,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11639
|EntrezGene=11639
|HGNC=
|HGNC=
|MCL_coexpression_id=3440
|TSSclassifier=NA
|UniProt=Q3U489,Q9WUR9
|UniProt=Q3U489,Q9WUR9
|association_with_transcript=14bp_to_NM_001177604,uc008tvo.2_5end
|association_with_transcript=14bp_to_NM_001177604,uc008tvo.2_5end
|cluster_id=chr4:101091940..101091954,+
|description=CAGE_peak_4_at_Ak4_5end
|description=CAGE_peak_4_at_Ak4_5end
|id=chr4:101091940..101091954,+
|id=chr4:101091940..101091954,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!2.00e-13!114;UBERON:0004111!4.40e-13!122;UBERON:0003914!8.94e-11!47;UBERON:0002107!1.14e-09!22;UBERON:0007499!1.14e-09!22;UBERON:0006925!1.14e-09!22;UBERON:0009497!1.14e-09!22;UBERON:0000015!1.14e-09!22;UBERON:0002423!1.14e-09!22;UBERON:0006235!1.14e-09!22;UBERON:0008835!1.14e-09!22;UBERON:0003894!1.14e-09!22;UBERON:0004161!1.14e-09!22;UBERON:0008836!1.14e-09!22;UBERON:0009854!1.22e-08!23;UBERON:0009856!1.22e-08!23;UBERON:0002365!1.86e-08!25;UBERON:0002330!1.86e-08!25
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-15,22;UBERON:0007499,1.08e-15,22;UBERON:0006925,1.08e-15,22;UBERON:0009497,1.08e-15,22;UBERON:0000015,1.08e-15,22;UBERON:0002423,1.08e-15,22;UBERON:0006235,1.08e-15,22;UBERON:0008835,1.08e-15,22;UBERON:0003894,1.08e-15,22;UBERON:0004161,1.08e-15,22;UBERON:0008836,1.08e-15,22;UBERON:0009854,9.52e-15,23;UBERON:0009856,9.52e-15,23;UBERON:0002365,4.34e-13,25;UBERON:0002330,4.34e-13,25;UBERON:0000025,8.14e-10,114;UBERON:0003914,9.44e-09,47;UBERON:0002021,1.26e-08,10;UBERON:0000411,1.26e-08,10;UBERON:0001950,1.26e-08,10;UBERON:0004111,2.34e-08,122;UBERON:0005172,8.33e-08,49;UBERON:0005173,8.33e-08,49;UBERON:0002417,8.33e-08,49;UBERON:0000916,8.33e-08,49;UBERON:0003528,6.46e-07,29;UBERON:0002791,6.46e-07,29;UBERON:0001893,6.46e-07,29
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,2.29616883407888,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,1.84519436275371,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0.65407546914134,0,0.194429899074283,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.599200221036809,1.15265491596466,0.207379224616955,0.675029691658453,0,0.571301968807607,0.441737081903227,0.244981598429908,0,0,2.20231761998777,1.91531007127782,2.15049146558741,0.263772575460388,0.457438218012048,0,1.95428099300967,3.37657566019008,2.90316670775939,0.883885756421003,0.427115042397309,0.372798891650601,0.302904773332736,0.151143120213571,0,3.44169550792555,4.0798280022465,8.09554787456726,3.24888208723835,8.96053774194671,3.5111105032938,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,5.1382745873577,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0.484875253135222,0,7.31951992528868,4.1889341362691,0.255457055208591,0.359445373517761,0,0.254140454146129,2.24685959107234,1.37250180845588,0.376963056338593,3.99795936442236,2.55715457330331,0.62336413367868,0.811206315338788,0.305518091550949,0.622034853050465,0.758168275301024,0.631325567659422,0.520481771850815,0.689706313300419,1.44049703844279,0.60281927134286,0.136072998302656,0.2562274405697,0.562210347358373,1.03481348295606,0,0,0.351902248327898,0.43839146485515,0,0.696504333044333,0.61734640922383,0.59710280045548,2.1066395619397,0.51469581422943,2.27330799516474,0.621377317606506,1.64168241986767,1.08037236876609,0.946978942340841,0.590292695242212,1.07986979021165,1.86027155800326,1.87791380979733,0.817357396570186,0.493679549740441,0.492502392237286,0.56748166682099,1.90059983652932,0.878200461164203,0.805238512562231,2.3131894342054,3.49875682089567,0,0,0.426576501070468,0,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,1.32767530667157,0.228497025219458,0,0.203651327845314,0.581857461502877,0.701358198903186,1.07502113111237,4.42830443938806,4.23896565171712,2.34454611451421,9.19003143970162,0.333690211432188,0.786235980452812,0.449724224769707,1.62288097110802,1.68824011826692,1.2731292589071,2.01387296215567,2.7562988551756,3.84385978463314,8.62609239164127,4.46569137202204,4.36852742360385,3.03094653536534,4.66433275156972,9.64887042726734,0.369506380333209,0.947457058852424,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,1.19021820443007,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0,0.642202359951168,0.937693492737625,0.327869890753351,0.504941854408746,0,0.780877488593277,0.215423397732799,0,0.668396022247182,0,0,0.292255857911312,0.790575555893047,1.60660658210904,0.283880170416537,1.06839362200353,1.14020871547503,0.824850614862677,0,0.485561272309963,0,0.754420319023592,0.590603785761546,2.15204603560749,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,2.38307724027652,0.540183282093931,0.646793418913773,0.428674070063185,0.532020700926821,0.535106452806212,0.329098041204242,0.304464949114599,1.17335854031855,0,0.220528398054962,1.15420377059036,0.807322133479528,0.301564624640779,0.716234064018819,0.820704498725306,0.291480836629851,0.927126510052548,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,1.69978429993855,1.25956307091292,1.93479963326193,0.954670618015114,0.474503990371703,1.21991680276109,0.216010681643603,1.67270636811575,1.31017538247707,2.56242258131159,2.31429676030941,3.14107130380836,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.194451188344048,0.774958940866387,0.337912250981556,0.469428954583016,0.5208175393758,0.629156066554265,0.483168241652012,0.288030006257865,0,0.405450430580328,0.513554785824136,0.909445760844565,0,0.596044064343795,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0.807424709485281,0.503653849092235,0.386379188064381,0.563047426353546,0.183151624267265,0.643105137237198,0.501572104035363,1.6942555278512,1.38097570952153,0.572895513439397,2.06223818812425,2.05524755931193,3.7769694869485,2.02506750069542,4.5032120322422,4.07828168085784,6.21312374102184,0.518936737920883,0,0,0.729320151204882,0.628839487883947,0.735374033800057,0.44449345560323,0.206035057238894,0,0,0,0.754505365544305,0.749132059759059,0.832326981263301,0.34461281373368,0,1.0429589335037,0.964546102318525,0,0.883193520806384,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.73171189149109,0,0.271608227691724,0.561142271657738,0.711810108745045,0.197008964751127,0,0.309873682371932,0.385813221962283,1.24905288968973,0.935726433781634,0.429742108096597,0.382576664137687,1.10295709559758,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0,0,2.29616883407888,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,1.84519436275371,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.709638518536602,0.183546752161682,0,0.65407546914134,0,0.194429899074283,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.599200221036809,1.15265491596466,0.207379224616955,0.675029691658453,0,0.571301968807607,0.441737081903227,0.244981598429908,0,0,2.20231761998777,1.91531007127782,2.15049146558741,0.263772575460388,0.457438218012048,0,1.95428099300967,3.37657566019008,2.90316670775939,0.883885756421003,0.427115042397309,0.372798891650601,0.302904773332736,0.151143120213571,0,3.44169550792555,4.0798280022465,8.09554787456726,3.24888208723835,8.96053774194671,3.5111105032938,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,5.1382745873577,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0.433798070759735,0,1.13236794963186,0.220841518460394,0.484875253135222,0,7.31951992528868,4.1889341362691,0.255457055208591,0.359445373517761,0,0.254140454146129,2.24685959107234,1.37250180845588,0.376963056338593,3.99795936442236,2.55715457330331,0.62336413367868,0.811206315338788,0.305518091550949,0.622034853050465,0.758168275301024,0.631325567659422,0.520481771850815,0.689706313300419,1.44049703844279,0.60281927134286,0.136072998302656,0.2562274405697,0.562210347358373,1.03481348295606,0,0,0.351902248327898,0.43839146485515,0,0.696504333044333,0.61734640922383,0.59710280045548,2.1066395619397,0.51469581422943,2.27330799516474,0.621377317606506,1.64168241986767,1.08037236876609,0.946978942340841,0.590292695242212,1.07986979021165,1.86027155800326,1.87791380979733,0.817357396570186,0.493679549740441,0.492502392237286,0.56748166682099,1.90059983652932,0.878200461164203,0.805238512562231,2.3131894342054,3.49875682089567,0,0,0.426576501070468,0,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,1.32767530667157,0.228497025219458,0,0.203651327845314,0.581857461502877,0.701358198903186,1.07502113111237,4.42830443938806,4.23896565171712,2.34454611451421,9.19003143970162,0.333690211432188,0.786235980452812,0.449724224769707,1.62288097110802,1.68824011826692,1.2731292589071,2.01387296215567,2.7562988551756,3.84385978463314,8.62609239164127,4.46569137202204,4.36852742360385,3.03094653536534,4.66433275156972,9.64887042726734,0.369506380333209,0.947457058852424,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,1.19021820443007,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0,0.642202359951168,0.937693492737625,0.327869890753351,0.504941854408746,0,0.780877488593277,0.215423397732799,0,0.668396022247182,0,0,0.292255857911312,0.790575555893047,1.60660658210904,0.283880170416537,1.06839362200353,1.14020871547503,0.824850614862677,0,0.485561272309963,0,0.754420319023592,0.590603785761546,2.15204603560749,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,2.38307724027652,0.540183282093931,0.646793418913773,0.428674070063185,0.532020700926821,0.535106452806212,0.329098041204242,0.304464949114599,1.17335854031855,0,0.220528398054962,1.15420377059036,0.807322133479528,0.301564624640779,0.716234064018819,0.820704498725306,0.291480836629851,0.927126510052548,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,1.69978429993855,1.25956307091292,1.93479963326193,0.954670618015114,0.474503990371703,1.21991680276109,0.216010681643603,1.67270636811575,1.31017538247707,2.56242258131159,2.31429676030941,3.14107130380836,0.518459893167171,0.621339313086926,0,0.149516546043979,0.66183396182839,0.194451188344048,0.774958940866387,0.337912250981556,0.469428954583016,0.5208175393758,0.629156066554265,0.483168241652012,0.288030006257865,0,0.405450430580328,0.513554785824136,0.909445760844565,0,0.596044064343795,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0.807424709485281,0.503653849092235,0.386379188064381,0.563047426353546,0.183151624267265,0.643105137237198,0.501572104035363,1.6942555278512,1.38097570952153,0.572895513439397,2.06223818812425,2.05524755931193,3.7769694869485,2.02506750069542,4.5032120322422,4.07828168085784,6.21312374102184,0.518936737920883,0,0,0.729320151204882,0.628839487883947,0.735374033800057,0.44449345560323,0.206035057238894,0,0,0,0.754505365544305,0.749132059759059,0.832326981263301,0.34461281373368,0,1.0429589335037,0.964546102318525,0,0.883193520806384,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.73171189149109,0,0.271608227691724,0.561142271657738,0.711810108745045,0.197008964751127,0,0.309873682371932,0.385813221962283,1.24905288968973,0.935726433781634,0.429742108096597,0.382576664137687,1.10295709559758,0.231867835620421
|short_description=p4@Ak4
|short_description=p4@Ak4
}}
}}

Latest revision as of 01:36, 26 September 2015

Short description:p4@Ak4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ak4_5end
Coexpression cluster:MCL_coexpression_mm9:3440
Association with transcript: 14bp_to_NM_001177604, uc008tvo.2_5end
EntrezGene:Ak4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ak4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.08e-1522
epithelial sac1.08e-1522
digestive gland1.08e-1522
epithelium of foregut-midgut junction1.08e-1522
anatomical boundary1.08e-1522
hepatobiliary system1.08e-1522
foregut-midgut junction1.08e-1522
hepatic diverticulum1.08e-1522
liver primordium1.08e-1522
septum transversum1.08e-1522
liver bud1.08e-1522
digestive tract diverticulum9.52e-1523
sac9.52e-1523
exocrine gland4.34e-1325
exocrine system4.34e-1325
tube8.14e-10114
epithelial tube9.44e-0947
occipital lobe1.26e-0810
visual cortex1.26e-0810
neocortex1.26e-0810
anatomical conduit2.34e-08122
abdomen element8.33e-0849
abdominal segment element8.33e-0849
abdominal segment of trunk8.33e-0849
abdomen8.33e-0849
brain grey matter6.46e-0729
regional part of telencephalon6.46e-0729
telencephalon6.46e-0729
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:101091940..101091954,%2B&oldid=4225807"