FFCP PHASE1:Mm9::chr12:4082596..4082638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217378 | |EntrezGene=217378 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFP6 | |UniProt=Q8CFP6 | ||
|association_with_transcript=0bp_to_ENSMUST00000020986,ENSMUST00000049584_5end | |association_with_transcript=0bp_to_ENSMUST00000020986,ENSMUST00000049584_5end | ||
|cluster_id=chr12:4082596..4082638,+ | |||
|description=CAGE_peak_1_at_Dnajc27_5end | |description=CAGE_peak_1_at_Dnajc27_5end | ||
|id=chr12:4082596..4082638,+ | |id=chr12:4082596..4082638,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.10e-10!33;CL:0000047!2.10e-10!33;CL:0000031!2.10e-10!33;CL:0000404!2.10e-10!33;CL:0000221!1.37e-09!44;CL:0000133!1.37e-09!44;CL:0002319!2.20e-09!43;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39 | |ontology_enrichment_celltype=CL:0000540!2.10e-10!33;CL:0000047!2.10e-10!33;CL:0000031!2.10e-10!33;CL:0000404!2.10e-10!33;CL:0000221!1.37e-09!44;CL:0000133!1.37e-09!44;CL:0002319!2.20e-09!43;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0000393!3.61e-07!39;CL:0000211!3.61e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.09e-10,33;CL:0000047,2.09e-10,33;CL:0000031,2.09e-10,33;CL:0000404,2.09e-10,33;CL:0000221,1.36e-09,44;CL:0000133,1.36e-09,44;CL:0002319,2.19e-09,43;CL:0000117,3.91e-09,23;CL:0000337,3.91e-09,23;CL:0000393,3.59e-07,39;CL:0000211,3.59e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.64e-25!73;UBERON:0005743!1.64e-25!73;UBERON:0000073!3.27e-24!75;UBERON:0001016!3.27e-24!75;UBERON:0000033!1.05e-21!63;UBERON:0000153!1.55e-20!94;UBERON:0007811!1.63e-20!86;UBERON:0001049!1.11e-19!52;UBERON:0005068!1.11e-19!52;UBERON:0006241!1.11e-19!52;UBERON:0007135!1.11e-19!52;UBERON:0000955!4.27e-19!50;UBERON:0006238!4.27e-19!50;UBERON:0004121!1.68e-18!102;UBERON:0000924!1.68e-18!102;UBERON:0006601!1.68e-18!102;UBERON:0002616!1.87e-18!49;UBERON:0002346!4.47e-18!71;UBERON:0003075!4.47e-18!71;UBERON:0007284!4.47e-18!71;UBERON:0003056!6.38e-17!49;UBERON:0003080!1.60e-14!40;UBERON:0002020!2.43e-14!34;UBERON:0002780!6.98e-14!39;UBERON:0001890!6.98e-14!39;UBERON:0006240!6.98e-14!39;UBERON:0002791!7.68e-12!29;UBERON:0003528!7.68e-12!29;UBERON:0001893!7.68e-12!29;UBERON:0002619!1.30e-08!17;UBERON:0000956!8.43e-08!21;UBERON:0001869!8.43e-08!21;UBERON:0000203!8.43e-08!21;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.64e-25!73;UBERON:0005743!1.64e-25!73;UBERON:0000073!3.27e-24!75;UBERON:0001016!3.27e-24!75;UBERON:0000033!1.05e-21!63;UBERON:0000153!1.55e-20!94;UBERON:0007811!1.63e-20!86;UBERON:0001049!1.11e-19!52;UBERON:0005068!1.11e-19!52;UBERON:0006241!1.11e-19!52;UBERON:0007135!1.11e-19!52;UBERON:0000955!4.27e-19!50;UBERON:0006238!4.27e-19!50;UBERON:0004121!1.68e-18!102;UBERON:0000924!1.68e-18!102;UBERON:0006601!1.68e-18!102;UBERON:0002616!1.87e-18!49;UBERON:0002346!4.47e-18!71;UBERON:0003075!4.47e-18!71;UBERON:0007284!4.47e-18!71;UBERON:0003056!6.38e-17!49;UBERON:0003080!1.60e-14!40;UBERON:0002020!2.43e-14!34;UBERON:0002780!6.98e-14!39;UBERON:0001890!6.98e-14!39;UBERON:0006240!6.98e-14!39;UBERON:0002791!7.68e-12!29;UBERON:0003528!7.68e-12!29;UBERON:0001893!7.68e-12!29;UBERON:0002619!1.30e-08!17;UBERON:0000956!8.43e-08!21;UBERON:0001869!8.43e-08!21;UBERON:0000203!8.43e-08!21;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-25,73;UBERON:0001016,3.20e-24,75;UBERON:0002346,1.91e-22,64;UBERON:0003075,1.91e-22,64;UBERON:0007284,1.91e-22,64;UBERON:0004121,7.48e-22,95;UBERON:0000924,7.48e-22,95;UBERON:0006601,7.48e-22,95;UBERON:0000073,3.65e-21,54;UBERON:0001049,1.09e-19,52;UBERON:0005068,1.09e-19,52;UBERON:0006241,1.09e-19,52;UBERON:0007135,1.09e-19,52;UBERON:0010314,7.61e-19,92;UBERON:0010371,4.37e-18,73;UBERON:0000955,5.22e-17,47;UBERON:0006238,5.22e-17,47;UBERON:0003056,6.29e-17,49;UBERON:0002616,2.20e-16,46;UBERON:0003080,1.58e-14,40;UBERON:0002020,2.40e-14,34;UBERON:0002780,6.90e-14,39;UBERON:0001890,6.90e-14,39;UBERON:0006240,6.90e-14,39;UBERON:0003528,7.61e-12,29;UBERON:0002791,7.61e-12,29;UBERON:0001893,7.61e-12,29;UBERON:0002619,1.29e-08,17;UBERON:0000956,8.38e-08,21;UBERON:0001869,8.38e-08,21;UBERON:0000203,8.38e-08,21;UBERON:0002021,5.21e-07,10;UBERON:0000411,5.21e-07,10;UBERON:0001950,5.21e-07,10 | |||
|phase1_expression=6.56610273129655,0,0.454999239389536,0.30246421130683,0,2.18243053485457,2.10251376535973,3.74457637980571,21.11830832275,22.4701945269114,19.5188483777076,17.7094192969647,5.47842335779858,5.15780374272085,4.33042690360362,4.45445588257617,2.09868563438444,8.51747846467242,7.40417941470989,8.48779303596061,38.6096537285857,2.38298282882125,2.87319768052829,1.59992422793407,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,0.760093677825496,0.504060259519861,0,11.4305521222734,12.916360539276,0,1.1554064790051,1.82858109894342,2.24586291888606,0,0.7813353445238,0,0.588231488031014,0,0,3.02152363141385,2.53442328048786,2.38610777810186,2.34717403304412,7.41285531693518,6.59058548203415,9.13820525649132,5.45947044338914,4.31257693094915,10.7380867876951,8.70434570413613,8.06625117941913,2.31533492432352,1.43266719969378,4.12537673821954,12.7459370341547,13.2247744818008,10.775133859605,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,1.4209602298922,4.79360176829448,7.30014780110954,3.94020526772215,4.3201900266141,3.99617426567626,39.4198358477249,29.5963844875162,6.1245399607477,6.61333750025831,11.0306254393203,80.3845931295537,94.9993795353797,95.8504767518959,13.3205150607496,15.8273623432169,12.5019208933622,89.3385596804419,65.8432253737066,68.4536150040109,28.8736013764194,28.9014512022179,17.7079473534036,2.72614295999463,3.24957708459178,11.0148505706638,1.72084775396277,1.3599426674155,0,0,0.896053774194671,10.9546647702766,3.91989741929533,2.33807404142582,3.5333957451034,6.90132756905734,7.69958864485907,5.09610479413291,14.2213340630666,1.08245520505607,2.02687892380079,0.505524445014783,8.22123933977232,6.73238497482646,3.71105347662062,2.94925055502431,3.34912026143355,2.53677046981664,2.56228488939458,2.23418543557839,2.51333182659351,1.48316980640624,3.32578520915797,3.5384422077995,6.47067399789637,6.8460870722722,3.39412677194655,1.86391761218122,47.1377083188591,41.0515545354372,1.02182822083437,4.67278985573089,3.59941638596045,4.3203877204842,74.7455290630065,59.0175777636028,10.8062742817063,50.7567014961447,61.6274252166097,68.1544786155357,70.8994319606101,5.6011650117674,4.47865094196335,2.27450482590307,10.3116509384372,7.67710613479952,5.51765050640335,8.28285797104606,4.9732589885786,8.70867189136997,9.09607414022434,7.30873451565885,26.1290404446406,5.17363183038821,7.75334928688059,6.51019159406611,3.28793598641362,5.28289773528636,5.2237824978325,3.08673204611915,3.98068533636986,3.51106593656617,4.88961023517959,3.40996199274711,7.45652781127807,6.80125573945179,5.94204802821349,5.91861838963026,7.67380503814875,6.94202007993202,6.51095045301142,6.43856163359086,3.97002164048376,5.26591519723137,5.41752631461014,4.29664690593035,6.14039947186396,5.70830299756732,4.2946054003319,43.7403093013385,8.64398743985989,0.330418782983798,1.32225283331772,5.33220626338085,4.64473343720877,3.99489130098489,2.8235693447268,2.00140239460383,1.52180500890047,2.37264530772256,1.97638745668813,2.76468729680296,2.18852119245266,2.72949721966768,2.69645822596266,1.29682829924817,1.39398891278057,6.82804443431094,6.85491075658373,4.50830942692322,4.88763186828754,4.07300223052014,4.9095073923223,4.11037491307672,2.95220295959204,3.45397201251025,3.57851775373222,0.592905254174298,1.83529616287703,2.75182593158484,1.57403478669398,2.02860121388503,1.4470629585145,1.01850340712568,0.863088412352432,1.29708181420028,1.92192989231657,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,1.61457672169721,1.92977408545347,3.8798169934987,7.01118223550794,7.00749398700711,4.92260748748046,3.28566347603903,4.02015017860358,5.2369600994923,3.31727201358258,3.31033802623001,2.87904096543407,3.50800491046472,3.11340297959902,4.48980952851328,3.32692834737477,0,0.54390568381871,2.45882136509518,1.37968373152366,81.0780479438349,77.2425014642619,5.24591825205361,17.4204939771017,7.88770548540642,4.68526493155966,5.60100834105277,6.21318874676635,7.12955757063661,8.20921939287614,4.85772842009873,8.18316402151673,9.88219444866309,65.2282272336268,3.69044221541498,4.45164009168138,5.53815661802159,7.25868541079156,2.65490276679926,5.09839335925461,3.02323556964751,2.26326095707078,2.95301892880773,4.61152721915891,4.13485269069154,3.63533729477506,1.78248689192361,1.58018378967908,0,2.06271086496374,9.87274856685985,7.0223826672211,4.65691261617916,7.07312215604255,6.20690817747958,6.95638388648075,5.26556865926787,6.39376393140658,2.81606049676452,2.75381692122966,1.10264199027481,3.95727007059552,1.13025098687134,2.95533332147964,2.38744688006273,3.11867709515616,1.7488850197791,70.8324653680147,3.2465467351592,3.30218988741156,1.48155621895769,2.0720530270516,3.2806614653046,4.80434163733698,5.94924504978494,7.27747552083022,8.01559848065658,0,6.80122386199441,4.67634774391752,3.13215488383224,5.64538399239065,3.49380101993884,2.69728692769641,3.80205896336545,4.71160695571253,1.55537967950151,2.4853572523477,179.818047440257,4.0369467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| |phase1_expression=6.56610273129655,0,0.454999239389536,0.30246421130683,0,2.18243053485457,2.10251376535973,3.74457637980571,21.11830832275,22.4701945269114,19.5188483777076,17.7094192969647,5.47842335779858,5.15780374272085,4.33042690360362,4.45445588257617,2.09868563438444,8.51747846467242,7.40417941470989,8.48779303596061,38.6096537285857,2.38298282882125,2.87319768052829,1.59992422793407,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,0.760093677825496,0.504060259519861,0,11.4305521222734,12.916360539276,0,1.1554064790051,1.82858109894342,2.24586291888606,0,0.7813353445238,0,0.588231488031014,0,0,3.02152363141385,2.53442328048786,2.38610777810186,2.34717403304412,7.41285531693518,6.59058548203415,9.13820525649132,5.45947044338914,4.31257693094915,10.7380867876951,8.70434570413613,8.06625117941913,2.31533492432352,1.43266719969378,4.12537673821954,12.7459370341547,13.2247744818008,10.775133859605,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,1.4209602298922,4.79360176829448,7.30014780110954,3.94020526772215,4.3201900266141,3.99617426567626,39.4198358477249,29.5963844875162,6.1245399607477,6.61333750025831,11.0306254393203,80.3845931295537,94.9993795353797,95.8504767518959,13.3205150607496,15.8273623432169,12.5019208933622,89.3385596804419,65.8432253737066,68.4536150040109,28.8736013764194,28.9014512022179,17.7079473534036,2.72614295999463,3.24957708459178,11.0148505706638,1.72084775396277,1.3599426674155,0,0,0.896053774194671,10.9546647702766,3.91989741929533,2.33807404142582,3.5333957451034,6.90132756905734,7.69958864485907,5.09610479413291,14.2213340630666,1.08245520505607,2.02687892380079,0.505524445014783,8.22123933977232,6.73238497482646,3.71105347662062,2.94925055502431,3.34912026143355,2.53677046981664,2.56228488939458,2.23418543557839,2.51333182659351,1.48316980640624,3.32578520915797,3.5384422077995,6.47067399789637,6.8460870722722,3.39412677194655,1.86391761218122,47.1377083188591,41.0515545354372,1.02182822083437,4.67278985573089,3.59941638596045,4.3203877204842,74.7455290630065,59.0175777636028,10.8062742817063,50.7567014961447,61.6274252166097,68.1544786155357,70.8994319606101,5.6011650117674,4.47865094196335,2.27450482590307,10.3116509384372,7.67710613479952,5.51765050640335,8.28285797104606,4.9732589885786,8.70867189136997,9.09607414022434,7.30873451565885,26.1290404446406,5.17363183038821,7.75334928688059,6.51019159406611,3.28793598641362,5.28289773528636,5.2237824978325,3.08673204611915,3.98068533636986,3.51106593656617,4.88961023517959,3.40996199274711,7.45652781127807,6.80125573945179,5.94204802821349,5.91861838963026,7.67380503814875,6.94202007993202,6.51095045301142,6.43856163359086,3.97002164048376,5.26591519723137,5.41752631461014,4.29664690593035,6.14039947186396,5.70830299756732,4.2946054003319,43.7403093013385,8.64398743985989,0.330418782983798,1.32225283331772,5.33220626338085,4.64473343720877,3.99489130098489,2.8235693447268,2.00140239460383,1.52180500890047,2.37264530772256,1.97638745668813,2.76468729680296,2.18852119245266,2.72949721966768,2.69645822596266,1.29682829924817,1.39398891278057,6.82804443431094,6.85491075658373,4.50830942692322,4.88763186828754,4.07300223052014,4.9095073923223,4.11037491307672,2.95220295959204,3.45397201251025,3.57851775373222,0.592905254174298,1.83529616287703,2.75182593158484,1.57403478669398,2.02860121388503,1.4470629585145,1.01850340712568,0.863088412352432,1.29708181420028,1.92192989231657,2.87536413054709,1.11642284300551,0.624075346229121,0.505157755894224,1.61457672169721,1.92977408545347,3.8798169934987,7.01118223550794,7.00749398700711,4.92260748748046,3.28566347603903,4.02015017860358,5.2369600994923,3.31727201358258,3.31033802623001,2.87904096543407,3.50800491046472,3.11340297959902,4.48980952851328,3.32692834737477,0,0.54390568381871,2.45882136509518,1.37968373152366,81.0780479438349,77.2425014642619,5.24591825205361,17.4204939771017,7.88770548540642,4.68526493155966,5.60100834105277,6.21318874676635,7.12955757063661,8.20921939287614,4.85772842009873,8.18316402151673,9.88219444866309,65.2282272336268,3.69044221541498,4.45164009168138,5.53815661802159,7.25868541079156,2.65490276679926,5.09839335925461,3.02323556964751,2.26326095707078,2.95301892880773,4.61152721915891,4.13485269069154,3.63533729477506,1.78248689192361,1.58018378967908,0,2.06271086496374,9.87274856685985,7.0223826672211,4.65691261617916,7.07312215604255,6.20690817747958,6.95638388648075,5.26556865926787,6.39376393140658,2.81606049676452,2.75381692122966,1.10264199027481,3.95727007059552,1.13025098687134,2.95533332147964,2.38744688006273,3.11867709515616,1.7488850197791,70.8324653680147,3.2465467351592,3.30218988741156,1.48155621895769,2.0720530270516,3.2806614653046,4.80434163733698,5.94924504978494,7.27747552083022,8.01559848065658,0,6.80122386199441,4.67634774391752,3.13215488383224,5.64538399239065,3.49380101993884,2.69728692769641,3.80205896336545,4.71160695571253,1.55537967950151,2.4853572523477,179.818047440257,4.0369467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| ||
|short_description=p1@Dnajc27 | |short_description=p1@Dnajc27 | ||
}} | }} |
Latest revision as of 14:45, 26 September 2015
Short description: | p1@Dnajc27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajc27_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 0bp_to_ENSMUST00000020986, ENSMUST00000049584_5end |
EntrezGene: | Dnajc27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.09e-10 | 33 |
neuronal stem cell | 2.09e-10 | 33 |
neuroblast | 2.09e-10 | 33 |
electrically signaling cell | 2.09e-10 | 33 |
ectodermal cell | 1.36e-09 | 44 |
neurectodermal cell | 1.36e-09 | 44 |
neural cell | 2.19e-09 | 43 |
CNS neuron (sensu Vertebrata) | 3.91e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.91e-09 | 23 |
electrically responsive cell | 3.59e-07 | 39 |
electrically active cell | 3.59e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.61e-25 | 73 |
nervous system | 3.20e-24 | 75 |
neurectoderm | 1.91e-22 | 64 |
neural plate | 1.91e-22 | 64 |
presumptive neural plate | 1.91e-22 | 64 |
ectoderm-derived structure | 7.48e-22 | 95 |
ectoderm | 7.48e-22 | 95 |
presumptive ectoderm | 7.48e-22 | 95 |
regional part of nervous system | 3.65e-21 | 54 |
neural tube | 1.09e-19 | 52 |
neural rod | 1.09e-19 | 52 |
future spinal cord | 1.09e-19 | 52 |
neural keel | 1.09e-19 | 52 |
structure with developmental contribution from neural crest | 7.61e-19 | 92 |
ecto-epithelium | 4.37e-18 | 73 |
brain | 5.22e-17 | 47 |
future brain | 5.22e-17 | 47 |
pre-chordal neural plate | 6.29e-17 | 49 |
regional part of brain | 2.20e-16 | 46 |
anterior neural tube | 1.58e-14 | 40 |
gray matter | 2.40e-14 | 34 |
regional part of forebrain | 6.90e-14 | 39 |
forebrain | 6.90e-14 | 39 |
future forebrain | 6.90e-14 | 39 |
brain grey matter | 7.61e-12 | 29 |
regional part of telencephalon | 7.61e-12 | 29 |
telencephalon | 7.61e-12 | 29 |
regional part of cerebral cortex | 1.29e-08 | 17 |
cerebral cortex | 8.38e-08 | 21 |
cerebral hemisphere | 8.38e-08 | 21 |
pallium | 8.38e-08 | 21 |
occipital lobe | 5.21e-07 | 10 |
visual cortex | 5.21e-07 | 10 |
neocortex | 5.21e-07 | 10 |