FFCP PHASE1:Mm9::chr5:66444364..66444375,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:66444364..66444375,+ | |||
|description=CAGE_peak_at_chr5:66444364..66444375,+ | |description=CAGE_peak_at_chr5:66444364..66444375,+ | ||
|id=chr5:66444364..66444375,+ | |id=chr5:66444364..66444375,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.71e-17!9;CL:0002251!1.71e-17!9;CL:0000239!1.82e-12!6;CL:0000677!1.82e-12!6;CL:0000212!1.82e-12!6;CL:0000584!1.82e-12!6;CL:0000075!1.54e-10!7;CL:0002076!1.22e-09!15;CL:0000066!3.32e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.09e-35,9;CL:0002251,5.09e-35,9;CL:0000239,4.28e-34,6;CL:0000677,4.28e-34,6;CL:0000584,4.28e-34,6;CL:0000075,2.51e-29,7;CL:0002076,3.22e-21,15;CL:0000066,3.00e-18,25;CL:0000223,5.06e-16,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.93e-24!43;UBERON:0000344!7.31e-24!15;UBERON:0001242!1.48e-20!13;UBERON:0000060!1.48e-20!13;UBERON:0001262!1.48e-20!13;UBERON:0004786!1.48e-20!13;UBERON:0005409!3.78e-20!59;UBERON:0003350!1.71e-17!9;UBERON:0004808!1.71e-17!9;UBERON:0001277!1.71e-17!9;UBERON:0004923!2.07e-15!24;UBERON:0000485!6.44e-14!11;UBERON:0004119!1.75e-08!130;UBERON:0000925!1.75e-08!130;UBERON:0006595!1.75e-08!130;UBERON:0001007!5.20e-08!128;UBERON:0001555!5.20e-08!128;UBERON:0007026!5.20e-08!128;UBERON:0004921!9.38e-07!126;UBERON:0004185!9.38e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.09e-35,9;UBERON:0004808,5.09e-35,9;UBERON:0001277,5.09e-35,9;UBERON:0000485,9.39e-29,11;UBERON:0001242,2.07e-24,13;UBERON:0001262,2.07e-24,13;UBERON:0004786,2.07e-24,13;UBERON:0000344,3.22e-21,15;UBERON:0000160,9.44e-15,31;UBERON:0004923,2.05e-13,24;UBERON:0005409,8.37e-10,47 | |||
|phase1_expression=0,2.09385244583617,2.72999543633722,7.25914107136392,8.5152274090879,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,1.72376986148711,0.570070258369122,0.504060259519861,0,0,0,0,0.866554859253824,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0,0,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0.407302655690628,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,2.72999543633722,7.25914107136392,8.5152274090879,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,1.72376986148711,0.570070258369122,0.504060259519861,0,0,0,0,0.866554859253824,0.332469290716985,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0.474529061544512,0.494096864172033,0,0,0,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0.407302655690628,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:66444364..66444375,+ | |short_description=p@chr5:66444364..66444375,+ | ||
}} | }} |
Latest revision as of 13:14, 4 August 2015
Short description: | p@chr5:66444364..66444375, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:66444364..66444375, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.09e-35 | 9 |
epithelial cell of alimentary canal | 5.09e-35 | 9 |
brush border epithelial cell | 4.28e-34 | 6 |
gut absorptive cell | 4.28e-34 | 6 |
enterocyte | 4.28e-34 | 6 |
columnar/cuboidal epithelial cell | 2.51e-29 | 7 |
endo-epithelial cell | 3.22e-21 | 15 |
epithelial cell | 3.00e-18 | 25 |
endodermal cell | 5.06e-16 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.09e-35 | 9 |
gastrointestinal system epithelium | 5.09e-35 | 9 |
intestinal epithelium | 5.09e-35 | 9 |
simple columnar epithelium | 9.39e-29 | 11 |
intestinal mucosa | 2.07e-24 | 13 |
wall of intestine | 2.07e-24 | 13 |
gastrointestinal system mucosa | 2.07e-24 | 13 |
mucosa | 3.22e-21 | 15 |
intestine | 9.44e-15 | 31 |
organ component layer | 2.05e-13 | 24 |
gastrointestinal system | 8.37e-10 | 47 |