FFCP PHASE1:Mm9::chr3:133454479..133454487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=196 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:133454479..133454487,- | |||
|description=CAGE_peak_at_chr3:133454479..133454487,- | |description=CAGE_peak_at_chr3:133454479..133454487,- | ||
|id=chr3:133454479..133454487,- | |id=chr3:133454479..133454487,- | ||
|ontology_enrichment_celltype=CL:0000181!2.76e-12!5;CL:0000417!2.76e-12!5;CL:0000668!2.76e-12!5;CL:0000412!2.76e-12!5;CL:0000182!2.76e-12!5;CL:0000057!5.41e-08!1;CL:0000632!5.41e-08!1 | |ontology_enrichment_celltype=CL:0000181!2.76e-12!5;CL:0000417!2.76e-12!5;CL:0000668!2.76e-12!5;CL:0000412!2.76e-12!5;CL:0000182!2.76e-12!5;CL:0000057!5.41e-08!1;CL:0000632!5.41e-08!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.83e-16,1;CL:0000632,4.83e-16,1;CL:0000182,1.24e-12,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.60e-18!22;UBERON:0007499!3.60e-18!22;UBERON:0006925!3.60e-18!22;UBERON:0009497!3.60e-18!22;UBERON:0000015!3.60e-18!22;UBERON:0002423!3.60e-18!22;UBERON:0006235!3.60e-18!22;UBERON:0008835!3.60e-18!22;UBERON:0003894!3.60e-18!22;UBERON:0004161!3.60e-18!22;UBERON:0008836!3.60e-18!22;UBERON:0009854!2.38e-17!23;UBERON:0009856!2.38e-17!23;UBERON:0002365!6.64e-16!25;UBERON:0002330!6.64e-16!25;UBERON:0005172!1.44e-14!49;UBERON:0005173!1.44e-14!49;UBERON:0002417!1.44e-14!49;UBERON:0000916!1.44e-14!49;UBERON:0009569!1.71e-10!66;UBERON:0005256!3.28e-10!47;UBERON:0003914!4.33e-08!47;UBERON:0005177!7.47e-08!85;UBERON:0002368!8.89e-08!60;UBERON:0005057!2.17e-07!51;UBERON:0002530!4.24e-07!65;UBERON:0003929!8.65e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,2.719885334831,0.539703191637817,0,2.24013443548668,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0.246794327843601,9.19003143970162,0,0,0,0,0,0,0,0,0,0,0,0,1.01031551178845,1.97337154874103,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,2.719885334831,0.539703191637817,0,2.24013443548668,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0.246794327843601,9.19003143970162,0,0,0,0,0,0,0,0,0,0,0,0,1.01031551178845,1.97337154874103,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:133454479..133454487,- | |short_description=p@chr3:133454479..133454487,- | ||
}} | }} |
Latest revision as of 01:46, 6 August 2015
Short description: | p@chr3:133454479..133454487, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:133454479..133454487, - |
Coexpression cluster: | MCL_coexpression_mm9:196 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.83e-16 | 1 |
hepatic stellate cell | 4.83e-16 | 1 |
hepatocyte | 1.24e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.96e-24 | 22 |
epithelial sac | 3.96e-24 | 22 |
digestive gland | 3.96e-24 | 22 |
epithelium of foregut-midgut junction | 3.96e-24 | 22 |
anatomical boundary | 3.96e-24 | 22 |
hepatobiliary system | 3.96e-24 | 22 |
foregut-midgut junction | 3.96e-24 | 22 |
hepatic diverticulum | 3.96e-24 | 22 |
liver primordium | 3.96e-24 | 22 |
septum transversum | 3.96e-24 | 22 |
liver bud | 3.96e-24 | 22 |
digestive tract diverticulum | 4.18e-23 | 23 |
sac | 4.18e-23 | 23 |
exocrine gland | 2.66e-21 | 25 |
exocrine system | 2.66e-21 | 25 |
trunk mesenchyme | 4.78e-12 | 45 |
epithelial tube | 1.50e-11 | 47 |
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
gut epithelium | 6.31e-10 | 55 |
endocrine gland | 3.96e-09 | 60 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
gland | 1.88e-08 | 65 |
unilaminar epithelium | 2.50e-08 | 66 |
subdivision of trunk | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
endocrine system | 1.17e-07 | 72 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |