FFCP PHASE1:Mm9::chr13:29045274..29045293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20677 | |EntrezGene=20677 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=Q06831 | |UniProt=Q06831 | ||
|association_with_transcript=257bp_to_NM_009238,uc007pyk.1_5end | |association_with_transcript=257bp_to_NM_009238,uc007pyk.1_5end | ||
|cluster_id=chr13:29045274..29045293,- | |||
|description=CAGE_peak_6_at_Sox4_5end | |description=CAGE_peak_6_at_Sox4_5end | ||
|id=chr13:29045274..29045293,- | |id=chr13:29045274..29045293,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.50e-20,6;CL:0002608,8.32e-11,3;CL:0000117,4.98e-08,23;CL:0000337,4.98e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!8.39e-12!21;UBERON:0001869!8.39e-12!21;UBERON:0000203!8.39e-12!21;UBERON:0002791!5.47e-11!29;UBERON:0003528!5.47e-11!29;UBERON:0001893!5.47e-11!29;UBERON:0002619!1.03e-09!17;UBERON:0002020!3.04e-09!34;UBERON:0002780!2.15e-08!39;UBERON:0001890!2.15e-08!39;UBERON:0006240!2.15e-08!39;UBERON:0003080!4.01e-08!40 | |ontology_enrichment_uberon=UBERON:0000956!8.39e-12!21;UBERON:0001869!8.39e-12!21;UBERON:0000203!8.39e-12!21;UBERON:0002791!5.47e-11!29;UBERON:0003528!5.47e-11!29;UBERON:0001893!5.47e-11!29;UBERON:0002619!1.03e-09!17;UBERON:0002020!3.04e-09!34;UBERON:0002780!2.15e-08!39;UBERON:0001890!2.15e-08!39;UBERON:0006240!2.15e-08!39;UBERON:0003080!4.01e-08!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.22e-25,29;UBERON:0002791,2.22e-25,29;UBERON:0001893,2.22e-25,29;UBERON:0000956,6.61e-24,21;UBERON:0001869,6.61e-24,21;UBERON:0000203,6.61e-24,21;UBERON:0002020,3.76e-21,34;UBERON:0002780,5.24e-18,39;UBERON:0001890,5.24e-18,39;UBERON:0006240,5.24e-18,39;UBERON:0003080,1.80e-17,40;UBERON:0002619,3.40e-17,17;UBERON:0002616,9.41e-15,46;UBERON:0000955,2.29e-14,47;UBERON:0006238,2.29e-14,47;UBERON:0003056,1.21e-13,49;UBERON:0001049,1.16e-12,52;UBERON:0005068,1.16e-12,52;UBERON:0006241,1.16e-12,52;UBERON:0007135,1.16e-12,52;UBERON:0000073,4.55e-12,54;UBERON:0001954,9.40e-12,7;UBERON:0003022,9.40e-12,7;UBERON:0002421,9.40e-12,7;UBERON:0000349,9.40e-12,7;UBERON:0002600,9.40e-12,7;UBERON:0010371,1.65e-10,73;UBERON:0002346,1.16e-09,64;UBERON:0003075,1.16e-09,64;UBERON:0007284,1.16e-09,64;UBERON:0001017,3.01e-09,73;UBERON:0001016,6.59e-09,75;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10 | |||
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| ||
|short_description=p6@Sox4 | |short_description=p6@Sox4 | ||
}} | }} |
Latest revision as of 11:43, 1 October 2015
Short description: | p6@Sox4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sox4_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 257bp_to_NM_009238, uc007pyk.1_5end |
EntrezGene: | Sox4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.50e-20 | 6 |
hippocampal neuron | 8.32e-11 | 3 |
CNS neuron (sensu Vertebrata) | 4.98e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.98e-08 | 23 |